RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CCDC144BQ3MJ40 725 aa20.43■□□□□ 0.86
PDLIM7-202ENST00000355841 EARS2Q5JPH6 523 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-202ENST00000355841 TAPT1Q6NXT6 567 aa20.43■□□□□ 0.86
PDLIM7-202ENST00000355841 DIS3L2Q8IYB7 885 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-202ENST00000355841 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.43■□□□□ 0.868e-9■■■■□ 19.6
PDLIM7-202ENST00000355841 LOC102724159A0A0B4J2E5 919 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 FAM205CA6NFA0 338 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 RGS20O76081 388 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 ADCYAP1R1P41586 468 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 PWP2Q15269 919 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 PCNX4Q63HM2 1172 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 KIF3AQ9Y496 699 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 EIF3JO75822 258 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 SREBF1P36956 1147 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 ARHGAP4P98171 946 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 GJC2Q5T442 439 aaPredicted RBP20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 PIK3AP1Q6ZUJ8 805 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 TEX2Q8IWB9 1127 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 EHMT1Q9H9B1 1298 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 VTA1Q9NP79 307 aa20.42■□□□□ 0.86
PDLIM7-202ENST00000355841 SEPT4O43236 478 aa20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 LARP1BQ659C4 914 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 CYP2W1Q8TAV3 490 aa20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 TBCKQ8TEA7 893 aa20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 TNFRSF25Q93038 417 aa20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 DEFB118Q96PH6 123 aa20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 BRMS1Q9HCU9 246 aa20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 PAK6Q9NQU5 681 aaPredicted RBP20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 NRBP1Q9UHY1 535 aa20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 LRRC37A2A6NM11 1700 aa20.41■□□□□ 0.86
PDLIM7-202ENST00000355841 EDIL3O43854 480 aa20.4■□□□□ 0.86
PDLIM7-202ENST00000355841 ITGB5P18084 799 aa20.4■□□□□ 0.86
PDLIM7-202ENST00000355841 SAFBQ15424 915 aaKnown RBP eCLIP20.4■□□□□ 0.86
PDLIM7-202ENST00000355841 INF2Q27J81 1249 aa20.4■□□□□ 0.86
PDLIM7-202ENST00000355841 CCDC194A0A1B0GVG4 234 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 KIF28PB7ZC32 967 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 H3BQV1 296 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 ARIH2O95376 493 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 AKR1A1P14550 325 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 SMPD1P17405 629 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 NONOQ15233 471 aaKnown RBP eCLIP20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 IFFO2Q5TF58 517 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 MCTP2Q6DN12 878 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 CRYGNQ8WXF5 182 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 WDR11Q9BZH6 1224 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 DDX20Q9UHI6 824 aaKnown RBP20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 FAM184BQ9ULE4 1060 aa20.39■□□□□ 0.86
PDLIM7-202ENST00000355841 TNFAIP2Q03169 654 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 LY6KQ17RY6 165 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 LHX8Q68G74 356 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 KRT25Q7Z3Z0 450 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 UIMC1Q96RL1 719 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 CCDC85CA6NKD9 419 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 FAM86B1E9PN63 330 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 SORBS3O60504 671 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 FAM86B2P0C5J1 330 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 ZNF76P36508 570 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 IRX5P78411 483 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 BECN1Q14457 450 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 MCTP1Q6DN14 999 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 SCFD2Q8WU76 684 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 COPS5Q92905 334 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 INPP4AQ96PE3 977 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 UBIAD1Q9Y5Z9 338 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 MRVI1Q9Y6F6 885 aa20.38■□□□□ 0.85
PDLIM7-202ENST00000355841 RBM47A0AV96 593 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-202ENST00000355841 MYCNP04198 464 aaPredicted RBP20.37■□□□□ 0.85
PDLIM7-202ENST00000355841 TXNP10599 105 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-202ENST00000355841 SEMA3FQ13275 785 aa20.37■□□□□ 0.85
PDLIM7-202ENST00000355841 GNL2Q13823 731 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-202ENST00000355841 XRRA1Q6P2D8 792 aa20.37■□□□□ 0.85
PDLIM7-202ENST00000355841 TMEM106CQ9BVX2 250 aa20.37■□□□□ 0.85
PDLIM7-202ENST00000355841 POTEFA5A3E0 1075 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 VPS37CA5D8V6 355 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 GJB1P08034 283 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 SYT1P21579 422 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 SP2Q02086 613 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 TTLL4Q14679 1199 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 IQSEC1Q6DN90 963 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 CCDC62Q6P9F0 684 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 U2AF1L4Q8WU68 220 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 MXRA8Q9BRK3 442 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 BCAS3Q9H6U6 928 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 PKD2L1Q9P0L9 805 aa20.36■□□□□ 0.85
PDLIM7-202ENST00000355841 STAM2O75886 525 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 PGK1P00558 417 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 CYP3A4P08684 503 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 RARBP10826 455 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 LETM2Q2VYF4 491 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 GNPTABQ3T906 1256 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 CEP55Q53EZ4 464 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 FOXP1Q9H334 677 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 JADE2Q9NQC1 790 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 GNEQ9Y223 722 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 MKI67P46013 3256 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 MYH7BA7E2Y1 1941 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 WNT7AO00755 349 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 TDP2O95551 362 aa20.35■□□□□ 0.85
PDLIM7-202ENST00000355841 ARP10275 920 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms