RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Foxn3Q499D0 457 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Nlrp2Q4PLS0 1046 aaKnown RBP14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Ccp110Q7TSH4 1004 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Sptlc3Q8BG54 563 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Arhgap18Q8K0Q5 663 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 GptQ8QZR5 496 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Smtnl1Q99LM3 459 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Znf394Q9Z1D9 521 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Arap3Q8R5G7 1538 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Atp2a2O55143 1044 aaKnown RBP14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Rgs9bpQ148R9 237 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Rgl2Q61193 778 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Q8C6G1 249 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Mphosph6Q9D1Q1 161 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Gucy1a3Q9ERL9 691 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Kcnq5Q9JK45 933 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 Bub1bQ9Z1S0 1052 aa14.71□□□□□ -0.05
Vps35-201ENSMUST00000034131 CatspereP0DP43 985 aa14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 PltpP55065 493 aa14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 Ptprn2P80560 1001 aa14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 Irf6P97431 467 aa14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 Yipf3Q3UDR8 347 aa14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 HnrnpdQ60668 355 aaKnown RBP14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gpbp1Q6NXH3 473 aaKnown RBP14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 Stk38lQ7TSE6 464 aa14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 Haus4Q8BFT2 363 aa14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 Lrrc34Q9DAM1 415 aa14.71□□□□□ -0.06
Vps35-201ENSMUST00000034131 Myh13B1AR69 1938 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Krt78E9Q0F0 1068 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Stag2O35638 1231 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Nr5a1P33242 462 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Stat4P42228 749 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Ephb4P54761 987 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Il17raQ60943 864 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Trappc11B2RXC1 1133 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Actn4P57780 912 aaKnown RBP14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Shc3Q61120 474 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Fkbp3Q62446 224 aaKnown RBP14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Lrrc57Q9D1G5 239 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Pex3Q9QXY9 372 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Krt71Q9R0H5 524 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Tjp2Q9Z0U1 1167 aaKnown RBP14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Simc1E9Q6E9 1354 aa14.7□□□□□ -0.06
Vps35-201ENSMUST00000034131 Cd44P15379 778 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Rnf207Q3V3A7 635 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gm5169Q5M8P2 212 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Krt12Q64291 487 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 NfrkbQ6PIJ4 1296 aaKnown RBP14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 PolnQ7TQ07 864 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Ccdc172Q810N9 267 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Exd1Q8CDF7 570 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Pspc1Q8R326 523 aaKnown RBP14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 FignQ9ERZ6 759 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Bpifb4A2BGH0 617 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Tmem165P52875 323 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Atp8a1P70704 1164 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Prpf38aQ4FK66 312 aaKnown RBP14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Tlr13Q6R5N8 991 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Prr16A3KMN5 304 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Akr1c19G3X9Y6 323 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 CidebO70303 219 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 M6prP24668 278 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Otop3Q80UF9 577 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Rwdd2aQ9D9S3 292 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Scn4aQ9ER60 1841 aa14.69□□□□□ -0.06
Vps35-201ENSMUST00000034131 Pnpla6Q3TRM4 1355 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Fam129cD3YZB0 591 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Ccdc6D3YZP9 469 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gjb6P70689 261 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Cmtr1Q9DBC3 837 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gm21698A0A087WQP8 267 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gm21663A0A0G2JE01 267 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gm7347D3YYI9 267 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 5031410I06RikE9Q4E0 267 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Chrna9G3X8Z7 479 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Myl3P09542 204 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Becn2P0DM65 447 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Nhej1Q3KNJ2 295 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Orc2Q60862 576 aaKnown RBP14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Kif5bQ61768 963 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Pram1Q6BCL1 675 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 TwistnbQ78WZ7 330 aaKnown RBP14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Klhl29Q80T74 875 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Fgd5Q80UZ0 1219 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Ranbp17Q99NF8 1088 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Cep72Q9D3R3 646 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Mon2Q80TL7 1715 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Hsf3D0VYS2 492 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gm5862K7N5V5 267 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gm10220K7N660 267 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gucy1b3O54865 620 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Rab21P35282 222 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Gnat2P50149 354 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Traf3ip1Q149C2 625 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Zfyve27Q3TXX3 415 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 CcnjlQ5SRT8 387 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Luc7l3Q5SUF2 432 aaKnown RBP14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 KaznQ69ZS8 779 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Ifih1Q8R5F7 1025 aa14.68□□□□□ -0.06
Vps35-201ENSMUST00000034131 Rpa1Q8VEE4 623 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms