Protein–RNA interactions for Protein: Q61120

Shc3, SHC-transforming protein 3, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc3Q61120 Gm25239-201ENSMUST00000174915 86 ntBASIC38.78■■■■□ 3.8
Shc3Q61120 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Shc3Q61120 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Shc3Q61120 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.09■■■■□ 3.37
Shc3Q61120 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
Shc3Q61120 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Shc3Q61120 Psd-208ENSMUST00000224556 2034 ntBASIC34.92■■■■□ 3.18
Shc3Q61120 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Shc3Q61120 Gm15042-201ENSMUST00000120212 883 ntBASIC34.58■■■■□ 3.13
Shc3Q61120 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.11■■■■□ 3.05
Shc3Q61120 Gm15045-201ENSMUST00000117359 883 ntBASIC34■■■■□ 3.03
Shc3Q61120 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Shc3Q61120 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Shc3Q61120 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.76■■■□□ 2.99
Shc3Q61120 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Shc3Q61120 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Shc3Q61120 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Shc3Q61120 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Shc3Q61120 Gm24109-201ENSMUST00000175489 103 ntBASIC33.33■■■□□ 2.93
Shc3Q61120 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Shc3Q61120 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Shc3Q61120 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
Shc3Q61120 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Shc3Q61120 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Shc3Q61120 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Shc3Q61120 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
Shc3Q61120 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.79■■■□□ 2.84
Shc3Q61120 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
Shc3Q61120 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Shc3Q61120 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Shc3Q61120 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Shc3Q61120 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.49■■■□□ 2.79
Shc3Q61120 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Shc3Q61120 Gm23366-201ENSMUST00000175022 89 ntBASIC32.42■■■□□ 2.78
Shc3Q61120 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Shc3Q61120 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Shc3Q61120 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Shc3Q61120 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Shc3Q61120 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Shc3Q61120 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Shc3Q61120 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Shc3Q61120 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.99■■■□□ 2.71
Shc3Q61120 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.85■■■□□ 2.69
Shc3Q61120 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Shc3Q61120 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.77■■■□□ 2.68
Shc3Q61120 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.76■■■□□ 2.68
Shc3Q61120 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Shc3Q61120 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
Shc3Q61120 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Shc3Q61120 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Shc3Q61120 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Shc3Q61120 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Shc3Q61120 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.29■■■□□ 2.6
Shc3Q61120 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Shc3Q61120 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Shc3Q61120 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Shc3Q61120 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.04■■■□□ 2.56
Shc3Q61120 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Shc3Q61120 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Shc3Q61120 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Shc3Q61120 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.95■■■□□ 2.54
Shc3Q61120 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Shc3Q61120 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Shc3Q61120 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Shc3Q61120 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Shc3Q61120 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.77■■■□□ 2.52
Shc3Q61120 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.77■■■□□ 2.52
Shc3Q61120 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
Shc3Q61120 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Shc3Q61120 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Shc3Q61120 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Shc3Q61120 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Shc3Q61120 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Shc3Q61120 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Shc3Q61120 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Shc3Q61120 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.53■■■□□ 2.48
Shc3Q61120 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Shc3Q61120 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Shc3Q61120 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Shc3Q61120 Gm27325-201ENSMUST00000175467 74 ntBASIC30.45■■■□□ 2.47
Shc3Q61120 Gm25238-201ENSMUST00000174914 89 ntBASIC30.41■■■□□ 2.46
Shc3Q61120 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shc3Q61120 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Shc3Q61120 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
Shc3Q61120 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shc3Q61120 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Shc3Q61120 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.17■■■□□ 2.42
Shc3Q61120 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Shc3Q61120 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Shc3Q61120 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Shc3Q61120 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Shc3Q61120 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.1■■■□□ 2.41
Shc3Q61120 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Shc3Q61120 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
Shc3Q61120 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Shc3Q61120 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Shc3Q61120 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Shc3Q61120 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Shc3Q61120 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Shc3Q61120 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms