Protein–RNA interactions for Protein: P54761

Ephb4, Ephrin type-B receptor 4, mousemouse

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb4P54761 Gm25239-201ENSMUST00000174915 86 ntBASIC43.38■■■■■ 4.53
Ephb4P54761 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.39■■■■■ 4.06
Ephb4P54761 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
Ephb4P54761 Gm24109-201ENSMUST00000175489 103 ntBASIC37.87■■■■□ 3.65
Ephb4P54761 Gm15042-201ENSMUST00000120212 883 ntBASIC37.32■■■■□ 3.56
Ephb4P54761 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.65■■■■□ 3.46
Ephb4P54761 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
Ephb4P54761 Gm15045-201ENSMUST00000117359 883 ntBASIC36.45■■■■□ 3.43
Ephb4P54761 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Ephb4P54761 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Ephb4P54761 Gm23366-201ENSMUST00000175022 89 ntBASIC36.09■■■■□ 3.37
Ephb4P54761 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Ephb4P54761 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.56■■■■□ 3.28
Ephb4P54761 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.19■■■■□ 3.22
Ephb4P54761 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.18■■■■□ 3.22
Ephb4P54761 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Ephb4P54761 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Ephb4P54761 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ephb4P54761 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Ephb4P54761 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
Ephb4P54761 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.57■■■■□ 3.12
Ephb4P54761 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Ephb4P54761 Gm25238-201ENSMUST00000174914 89 ntBASIC34.45■■■■□ 3.11
Ephb4P54761 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ephb4P54761 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.39■■■■□ 3.1
Ephb4P54761 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
Ephb4P54761 Psd-208ENSMUST00000224556 2034 ntBASIC33.68■■■□□ 2.98
Ephb4P54761 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.64■■■□□ 2.98
Ephb4P54761 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
Ephb4P54761 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Ephb4P54761 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
Ephb4P54761 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Ephb4P54761 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Ephb4P54761 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.31■■■□□ 2.92
Ephb4P54761 Gm25262-201ENSMUST00000174934 133 ntBASIC33.2■■■□□ 2.91
Ephb4P54761 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.17■■■□□ 2.9
Ephb4P54761 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.16■■■□□ 2.9
Ephb4P54761 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
Ephb4P54761 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ephb4P54761 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Ephb4P54761 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ephb4P54761 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Ephb4P54761 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.8■■■□□ 2.84
Ephb4P54761 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.78■■■□□ 2.84
Ephb4P54761 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.71■■■□□ 2.83
Ephb4P54761 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.66■■■□□ 2.82
Ephb4P54761 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
Ephb4P54761 Gm27325-201ENSMUST00000175467 74 ntBASIC32.62■■■□□ 2.81
Ephb4P54761 Gm26115-201ENSMUST00000175605 87 ntBASIC32.6■■■□□ 2.81
Ephb4P54761 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.59■■■□□ 2.81
Ephb4P54761 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Ephb4P54761 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Ephb4P54761 Gm8109-201ENSMUST00000194076 746 ntBASIC32.41■■■□□ 2.78
Ephb4P54761 Rab21-202ENSMUST00000218831 843 ntBASIC32.37■■■□□ 2.77
Ephb4P54761 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Ephb4P54761 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.35■■■□□ 2.77
Ephb4P54761 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ephb4P54761 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ephb4P54761 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Ephb4P54761 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Ephb4P54761 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ephb4P54761 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Ephb4P54761 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ephb4P54761 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.06■■■□□ 2.72
Ephb4P54761 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Ephb4P54761 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ephb4P54761 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ephb4P54761 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32■■■□□ 2.71
Ephb4P54761 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.9■■■□□ 2.7
Ephb4P54761 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.79■■■□□ 2.68
Ephb4P54761 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.77■■■□□ 2.68
Ephb4P54761 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ephb4P54761 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ephb4P54761 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.64■■■□□ 2.66
Ephb4P54761 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ephb4P54761 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ephb4P54761 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ephb4P54761 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Ephb4P54761 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Ephb4P54761 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ephb4P54761 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ephb4P54761 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.47■■■□□ 2.63
Ephb4P54761 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ephb4P54761 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ephb4P54761 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.39■■■□□ 2.62
Ephb4P54761 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ephb4P54761 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ephb4P54761 Gm24804-201ENSMUST00000174982 85 ntBASIC31.31■■■□□ 2.6
Ephb4P54761 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.25■■■□□ 2.59
Ephb4P54761 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.25■■■□□ 2.59
Ephb4P54761 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
Ephb4P54761 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ephb4P54761 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.14■■■□□ 2.58
Ephb4P54761 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
Ephb4P54761 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.06■■■□□ 2.56
Ephb4P54761 Gm27322-201ENSMUST00000184007 104 ntBASIC31■■■□□ 2.55
Ephb4P54761 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.99■■■□□ 2.55
Ephb4P54761 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.98■■■□□ 2.55
Ephb4P54761 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ephb4P54761 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms