RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	GPI1	P53306	609 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	ARK1	P53974	638 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	PDS5	Q04264	1277 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	RBS1	Q05672	457 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	BNA5	Q05979	453 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	SDH5	Q08230	162 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	RCN2	Q12044	265 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	NMD4	Q12129	218 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	YER078W-A	Q3E7A2	54 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	SAM1	P10659	382 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	SAM2	P19358	384 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	OLE1	P21147	510 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	IDH2	P28241	369 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	SAC6	P32599	642 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	CST26	P38226	397 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	NOP16	P40007	231 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	FAU1	P40099	211 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	YTA12	P40341	825 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	ALG8	P40351	577 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	ERP1	Q05359	219 aa	Known RBP	0.88	□□□□□ -2.27
SEC8	YPR055W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
SEC8	YPR055W	YOR387C	Q08910	206 aa		0.88	□□□□□ -2.27
SEC8	YPR055W	SEM1	O94742	89 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	MET17	P06106	444 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	REV1	P12689	985 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	CBS2	P14905	389 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	GLK1	P17709	500 aa	Known RBP	0.87	□□□□□ -2.27
SEC8	YPR055W	NAM9	P27929	486 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	GPI10	P30777	616 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	MRP4	P32902	394 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	PMT1	P33775	817 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	TIF5	P38431	405 aa	Known RBP	0.87	□□□□□ -2.27
SEC8	YPR055W	NDT80	P38830	627 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	SPO22	P40511	975 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	YJR112W-A	Q3E743	109 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	FOB1	O13329	566 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	PPH22	P23595	377 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	RNA14	P25298	677 aa	Known RBP	0.87	□□□□□ -2.27
SEC8	YPR055W	PUT3	P25502	979 aa	Predicted RBP	0.87	□□□□□ -2.27
SEC8	YPR055W	BUB3	P26449	341 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	DPB3	P27344	201 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	THI2	P38141	450 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	YMR147W	P40218	223 aa	Known RBP	0.87	□□□□□ -2.27
SEC8	YPR055W	RMD8	P43620	662 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	OCA1	P50946	238 aa	Predicted RBP	0.87	□□□□□ -2.27
SEC8	YPR055W	YDL121C	Q07541	149 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	THP3	Q12049	470 aa	Known RBP	0.87	□□□□□ -2.27
SEC8	YPR055W	LSP1	Q12230	341 aa	Known RBP	0.87	□□□□□ -2.27
SEC8	YPR055W	RRD2	Q12461	358 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	AVL9	Q12500	764 aa		0.87	□□□□□ -2.27
SEC8	YPR055W	ARG3	P05150	338 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	RPL31B	P0C2H9	113 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	CLN3	P13365	580 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	RPL3	P14126	387 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	PRP2	P20095	876 aa	Predicted RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	YCR007C	P25354	239 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	SWD3	P38123	315 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	IDP2	P41939	412 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	ELP2	P42935	788 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	YFL067W	P43537	175 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	RRT5	P43607	289 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	ALK1	P43633	760 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	NCA3	P46955	337 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	ART5	P53244	586 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	PCP1	P53259	346 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	TMC1	Q08422	150 aa	Predicted RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	HNT3	Q08702	217 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	PAP1	P29468	568 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	AFG1	P32317	509 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	NDI1	P32340	513 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	RSM22	P36056	628 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	NAT2	P37293	288 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	YHR131C	P38835	850 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	WWM1	P43582	211 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	MSO1	P53604	210 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	MRPL35	Q06678	367 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	YDL007C-A	Q2V2Q0	85 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	GCN4	P03069	281 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	PRD1	P25375	712 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	DEG1	P31115	442 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	GLC7	P32598	312 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	SWH1	P35845	1188 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	YCR041W	P37265	110 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	ERP2	P39704	215 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	NDE1	P40215	560 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	OST1	P41543	476 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	YPI1	P43587	155 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	YGL108C	P53139	140 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	POP6	P53218	158 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	MRD1	Q06106	887 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	VPS74	Q06385	345 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	SIL1	Q08199	421 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	ETT1	Q08421	412 aa	Known RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	KEL3	Q08979	651 aa	Predicted RBP	0.86	□□□□□ -2.27
SEC8	YPR055W	TMS1	Q12116	473 aa		0.86	□□□□□ -2.27
SEC8	YPR055W	ATR1	P13090	542 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	ATP10	P18496	279 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	CPR4	P25334	318 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	SPB1	P25582	841 aa	Predicted RBP	0.85	□□□□□ -2.27
SEC8	YPR055W	YCR100C	P25606	316 aa		0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms