RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C SCM3Q12334 223 aa4.5□□□□□ -1.69
BLS1YLR408C YMR230W-AQ3E7B5 62 aa4.5□□□□□ -1.69
BLS1YLR408C SPC110P32380 944 aa4.49□□□□□ -1.69
BLS1YLR408C FMP46P36141 133 aaKnown RBP4.49□□□□□ -1.69
BLS1YLR408C JNM1P36224 373 aa4.49□□□□□ -1.69
BLS1YLR408C VMA13P41807 478 aaKnown RBP4.49□□□□□ -1.69
BLS1YLR408C RTT101P47050 842 aa4.49□□□□□ -1.69
BLS1YLR408C GPI1P53306 609 aa4.49□□□□□ -1.69
BLS1YLR408C RLI1Q03195 608 aaKnown RBP4.49□□□□□ -1.69
BLS1YLR408C YLR287CQ05881 355 aa4.49□□□□□ -1.69
BLS1YLR408C CFT2Q12102 859 aaPredicted RBP4.49□□□□□ -1.69
BLS1YLR408C CAR1P00812 333 aaKnown RBP4.48□□□□□ -1.69
BLS1YLR408C RED1P14291 827 aa4.48□□□□□ -1.69
BLS1YLR408C MTF1P14908 341 aaKnown RBP4.48□□□□□ -1.69
BLS1YLR408C BUD14P27637 709 aa4.48□□□□□ -1.69
BLS1YLR408C ATP11P32453 318 aa4.48□□□□□ -1.69
BLS1YLR408C NDC1P32500 655 aa4.48□□□□□ -1.69
BLS1YLR408C FRE1P32791 686 aa4.48□□□□□ -1.69
BLS1YLR408C MFT1P33441 392 aaKnown RBP4.48□□□□□ -1.69
BLS1YLR408C URB2P47108 1174 aa4.48□□□□□ -1.69
BLS1YLR408C COS10P52924 374 aa4.48□□□□□ -1.69
BLS1YLR408C YGL108CP53139 140 aa4.48□□□□□ -1.69
BLS1YLR408C VPS74Q06385 345 aa4.48□□□□□ -1.69
BLS1YLR408C RTN2Q12443 393 aa4.48□□□□□ -1.69
BLS1YLR408C RRD2Q12461 358 aa4.48□□□□□ -1.69
BLS1YLR408C RAV1P47104 1357 aa4.48□□□□□ -1.69
BLS1YLR408C EXO70P19658 623 aa4.47□□□□□ -1.69
BLS1YLR408C YCR022CP25620 114 aa4.47□□□□□ -1.69
BLS1YLR408C ATS1P31386 333 aa4.47□□□□□ -1.69
BLS1YLR408C RPR2P40571 144 aa4.47□□□□□ -1.69
BLS1YLR408C IRC15Q02733 499 aa4.47□□□□□ -1.69
BLS1YLR408C SYF1Q04048 859 aaPredicted RBP4.47□□□□□ -1.69
BLS1YLR408C SFI1Q12369 946 aa4.47□□□□□ -1.69
BLS1YLR408C YBR298C-AQ8TGK4 73 aa4.47□□□□□ -1.69
BLS1YLR408C PHO2P07269 559 aa4.46□□□□□ -1.7
BLS1YLR408C PTR2P32901 601 aa4.46□□□□□ -1.7
BLS1YLR408C OTU2P38747 307 aaKnown RBP4.46□□□□□ -1.7
BLS1YLR408C MDM31P38880 579 aa4.46□□□□□ -1.7
BLS1YLR408C HAT2P39984 401 aa4.46□□□□□ -1.7
BLS1YLR408C AYT1Q12226 474 aa4.46□□□□□ -1.7
BLS1YLR408C YOL159C-AQ3E769 90 aa4.46□□□□□ -1.7
BLS1YLR408C CYB2P00175 591 aa4.45□□□□□ -1.7
BLS1YLR408C RHO2P06781 192 aa4.45□□□□□ -1.7
BLS1YLR408C SPB1P25582 841 aaPredicted RBP4.45□□□□□ -1.7
BLS1YLR408C BUB3P26449 341 aa4.45□□□□□ -1.7
BLS1YLR408C FUN19P28003 413 aaPredicted RBP4.45□□□□□ -1.7
BLS1YLR408C RAD14P28519 371 aa4.45□□□□□ -1.7
BLS1YLR408C NFU1P32860 256 aa4.45□□□□□ -1.7
BLS1YLR408C MTC4P38335 694 aaKnown RBP4.45□□□□□ -1.7
BLS1YLR408C RPH1P39956 796 aa4.45□□□□□ -1.7
BLS1YLR408C FAU1P40099 211 aa4.45□□□□□ -1.7
BLS1YLR408C SYG1P40528 902 aa4.45□□□□□ -1.7
BLS1YLR408C YDL186WP48568 277 aa4.45□□□□□ -1.7
BLS1YLR408C OCA1P50946 238 aaPredicted RBP4.45□□□□□ -1.7
BLS1YLR408C VTA1Q06263 330 aa4.45□□□□□ -1.7
BLS1YLR408C RKM5Q12367 367 aa4.45□□□□□ -1.7
BLS1YLR408C MES1P00958 751 aaKnown RBP4.44□□□□□ -1.7
BLS1YLR408C GYP6P32806 458 aa4.44□□□□□ -1.7
BLS1YLR408C CCT4P39078 528 aaKnown RBP4.44□□□□□ -1.7
BLS1YLR408C YFR016CP43597 1233 aaKnown RBP4.44□□□□□ -1.7
BLS1YLR408C RPA49Q01080 415 aaPredicted RBP4.44□□□□□ -1.7
BLS1YLR408C RTT103Q05543 409 aa4.44□□□□□ -1.7
BLS1YLR408C TIP41Q12199 356 aa4.44□□□□□ -1.7
BLS1YLR408C ATR1P13090 542 aa4.43□□□□□ -1.7
BLS1YLR408C PRO3P32263 286 aaKnown RBP4.43□□□□□ -1.7
BLS1YLR408C HXT3P32466 567 aaKnown RBP4.43□□□□□ -1.7
BLS1YLR408C PMU1P36069 295 aa4.43□□□□□ -1.7
BLS1YLR408C NOC2P39744 710 aaKnown RBP4.43□□□□□ -1.7
BLS1YLR408C SHO1P40073 367 aa4.43□□□□□ -1.7
BLS1YLR408C LSM5P40089 93 aaKnown RBP4.43□□□□□ -1.7
BLS1YLR408C ALG8P40351 577 aa4.43□□□□□ -1.7
BLS1YLR408C POP1P41812 875 aa4.43□□□□□ -1.7
BLS1YLR408C YGR149WP48236 432 aa4.43□□□□□ -1.7
BLS1YLR408C GIR2Q03768 265 aaPredicted RBP4.43□□□□□ -1.7
BLS1YLR408C YTH1Q06102 208 aaPredicted RBP4.43□□□□□ -1.7
BLS1YLR408C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
BLS1YLR408C PPT2Q12036 173 aa4.43□□□□□ -1.7
BLS1YLR408C SET6Q12529 373 aa4.43□□□□□ -1.7
BLS1YLR408C RPL20AP0CX23 172 aaKnown RBP4.42□□□□□ -1.7
BLS1YLR408C RPL20BP0CX24 172 aaPredicted RBP4.42□□□□□ -1.7
BLS1YLR408C ATP10P18496 279 aa4.42□□□□□ -1.7
BLS1YLR408C MCK1P21965 375 aaKnown RBP4.42□□□□□ -1.7
BLS1YLR408C SNT1P25357 1226 aa4.42□□□□□ -1.7
BLS1YLR408C THI2P38141 450 aa4.42□□□□□ -1.7
BLS1YLR408C DLD2P46681 530 aaKnown RBP4.42□□□□□ -1.7
BLS1YLR408C GWT1P47026 490 aa4.42□□□□□ -1.7
BLS1YLR408C YGR250CP53316 781 aaKnown RBP4.42□□□□□ -1.7
BLS1YLR408C SOV1Q04748 898 aa4.42□□□□□ -1.7
BLS1YLR408C YML133CQ03099 1374 aa4.41□□□□□ -1.7
BLS1YLR408C YLL067CQ07888 1374 aa4.41□□□□□ -1.7
BLS1YLR408C YLL066CQ99208 1374 aa4.41□□□□□ -1.7
BLS1YLR408C HEM2P05373 342 aa4.41□□□□□ -1.7
BLS1YLR408C GDH1P07262 454 aaKnown RBP4.41□□□□□ -1.7
BLS1YLR408C SPS4P09937 338 aa4.41□□□□□ -1.7
BLS1YLR408C PRP16P15938 1071 aaPredicted RBP4.41□□□□□ -1.7
BLS1YLR408C CLC1P17891 233 aa4.41□□□□□ -1.7
BLS1YLR408C AFG1P32317 509 aa4.41□□□□□ -1.7
BLS1YLR408C YJL213WP40896 331 aa4.41□□□□□ -1.7
BLS1YLR408C TFG2P41896 400 aaPredicted RBP4.41□□□□□ -1.7
BLS1YLR408C ELP2P42935 788 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms