RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C TOM71P38825 639 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C GPI16P38875 610 aa1.99□□□□□ -2.09
RTT101YJL047C SKN7P38889 622 aa1.99□□□□□ -2.09
RTT101YJL047C HRB1P38922 454 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
RTT101YJL047C STN1P38960 494 aa1.99□□□□□ -2.09
RTT101YJL047C OPT1P40897 799 aa1.99□□□□□ -2.09
RTT101YJL047C LSB3P43603 459 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C URB2P47108 1174 aa1.99□□□□□ -2.09
RTT101YJL047C EMC2P47133 292 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C MSY1P48527 492 aa1.99□□□□□ -2.09
RTT101YJL047C ROG1P53118 685 aa1.99□□□□□ -2.09
RTT101YJL047C YGL114WP53134 725 aa1.99□□□□□ -2.09
RTT101YJL047C PGA2P53903 129 aa1.99□□□□□ -2.09
RTT101YJL047C YNL092WP53934 400 aa1.99□□□□□ -2.09
RTT101YJL047C ADE16P54113 591 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C RSN1Q03516 953 aa1.99□□□□□ -2.09
RTT101YJL047C CAB5Q03941 241 aa1.99□□□□□ -2.09
RTT101YJL047C RRG8Q06109 277 aa1.99□□□□□ -2.09
RTT101YJL047C YLR455WQ06188 304 aa1.99□□□□□ -2.09
RTT101YJL047C NDL1Q06568 189 aa1.99□□□□□ -2.09
RTT101YJL047C IZH3Q07959 543 aa1.99□□□□□ -2.09
RTT101YJL047C FRE5Q08908 694 aa1.99□□□□□ -2.09
RTT101YJL047C MRH1Q12117 320 aaPredicted RBP1.99□□□□□ -2.09
RTT101YJL047C PKH2Q12236 1081 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C RRD2Q12461 358 aa1.99□□□□□ -2.09
RTT101YJL047C FMP16Q12497 93 aa1.99□□□□□ -2.09
RTT101YJL047C ZPS1Q12512 249 aa1.99□□□□□ -2.09
RTT101YJL047C PDE2P06776 526 aa1.99□□□□□ -2.09
RTT101YJL047C PUT2P07275 575 aa1.99□□□□□ -2.09
RTT101YJL047C RAP1P11938 827 aa1.99□□□□□ -2.09
RTT101YJL047C PMR1P13586 950 aa1.99□□□□□ -2.09
RTT101YJL047C CDC15P27636 974 aa1.99□□□□□ -2.09
RTT101YJL047C CNE1P27825 502 aa1.99□□□□□ -2.09
RTT101YJL047C MVD1P32377 396 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C RIM1P32445 135 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C CDC5P32562 705 aa1.99□□□□□ -2.09
RTT101YJL047C SPR1P32603 445 aa1.99□□□□□ -2.09
RTT101YJL047C EMP70P32802 667 aa1.99□□□□□ -2.09
RTT101YJL047C NUP133P36161 1157 aa1.99□□□□□ -2.09
RTT101YJL047C STV1P37296 890 aa1.99□□□□□ -2.09
RTT101YJL047C DIA4P38705 446 aaPredicted RBP1.99□□□□□ -2.09
RTT101YJL047C MSR1P38714 643 aa1.99□□□□□ -2.09
RTT101YJL047C YHR210CP38893 341 aa1.99□□□□□ -2.09
RTT101YJL047C YER085CP40058 173 aa1.99□□□□□ -2.09
RTT101YJL047C YMR147WP40218 223 aaKnown RBP1.99□□□□□ -2.09
RTT101YJL047C YFR020WP43600 232 aa1.99□□□□□ -2.09
RTT101YJL047C CGR1P53188 120 aa1.99□□□□□ -2.09
RTT101YJL047C GTF1P53260 183 aaPredicted RBP1.99□□□□□ -2.09
RTT101YJL047C MFM1Q02783 413 aa1.99□□□□□ -2.09
RTT101YJL047C PLB2Q03674 706 aa1.99□□□□□ -2.09
RTT101YJL047C DIA2Q08496 732 aaPredicted RBP1.99□□□□□ -2.09
RTT101YJL047C HMI1Q12039 706 aa1.99□□□□□ -2.09
RTT101YJL047C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
RTT101YJL047C CYC1P00044 109 aaPredicted RBP1.98□□□□□ -2.09
RTT101YJL047C ALG1P16661 449 aa1.98□□□□□ -2.09
RTT101YJL047C FUS3P16892 353 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C PTC6P25646 442 aa1.98□□□□□ -2.09
RTT101YJL047C PSO2P30620 661 aa1.98□□□□□ -2.09
RTT101YJL047C HXT1P32465 570 aa1.98□□□□□ -2.09
RTT101YJL047C RAD23P32628 398 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C YKL023WP36103 277 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C AAP1P37898 856 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C ARA1P38115 344 aa1.98□□□□□ -2.09
RTT101YJL047C SPP381P38282 291 aaPredicted RBP1.98□□□□□ -2.09
RTT101YJL047C TCD1P38756 429 aa1.98□□□□□ -2.09
RTT101YJL047C YHR177WP38867 453 aa1.98□□□□□ -2.09
RTT101YJL047C RCY1P39531 840 aa1.98□□□□□ -2.09
RTT101YJL047C ELO1P39540 310 aa1.98□□□□□ -2.09
RTT101YJL047C YHB1P39676 399 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C FUN12P39730 1002 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C ECM10P39987 644 aa1.98□□□□□ -2.09
RTT101YJL047C OTU1P43558 301 aa1.98□□□□□ -2.09
RTT101YJL047C YHC3P47040 408 aa1.98□□□□□ -2.09
RTT101YJL047C MPS3P47069 682 aa1.98□□□□□ -2.09
RTT101YJL047C BRO1P48582 844 aa1.98□□□□□ -2.09
RTT101YJL047C SLG1P54867 378 aa1.98□□□□□ -2.09
RTT101YJL047C WAR1Q03631 944 aa1.98□□□□□ -2.09
RTT101YJL047C CTK1Q03957 528 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C MDM30Q05930 598 aa1.98□□□□□ -2.09
RTT101YJL047C IPK1Q06667 281 aa1.98□□□□□ -2.09
RTT101YJL047C CYK3Q07533 885 aa1.98□□□□□ -2.09
RTT101YJL047C TGS1Q12052 315 aa1.98□□□□□ -2.09
RTT101YJL047C INP53Q12271 1107 aa1.98□□□□□ -2.09
RTT101YJL047C APC2Q12440 853 aa1.98□□□□□ -2.09
RTT101YJL047C SPO24Q3E752 67 aa1.98□□□□□ -2.09
RTT101YJL047C RNR2P09938 399 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C KRS1P15180 591 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C YUR1P26725 428 aa1.98□□□□□ -2.09
RTT101YJL047C FRE1P32791 686 aa1.98□□□□□ -2.09
RTT101YJL047C TRM2P33753 639 aa1.98□□□□□ -2.09
RTT101YJL047C HES1P35843 434 aa1.98□□□□□ -2.09
RTT101YJL047C SNU114P36048 1008 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C ELF1P36053 145 aa1.98□□□□□ -2.09
RTT101YJL047C GMH1P36125 273 aa1.98□□□□□ -2.09
RTT101YJL047C IML3P38265 245 aa1.98□□□□□ -2.09
RTT101YJL047C YHR182WP38870 785 aa1.98□□□□□ -2.09
RTT101YJL047C BAP3P41815 604 aa1.98□□□□□ -2.09
RTT101YJL047C BNA6P43619 295 aa1.98□□□□□ -2.09
RTT101YJL047C TOS3P43637 560 aa1.98□□□□□ -2.09
RTT101YJL047C DPB11P47027 764 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms