RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YEL068CP39977 110 aa3.22□□□□□ -1.89
YIR040CYIR040C ASG1P40467 964 aa3.22□□□□□ -1.89
YIR040CYIR040C GVP36P40531 326 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C SMK1P41808 388 aa3.22□□□□□ -1.89
YIR040CYIR040C BAP3P41815 604 aa3.22□□□□□ -1.89
YIR040CYIR040C RMD8P43620 662 aa3.22□□□□□ -1.89
YIR040CYIR040C ALK1P43633 760 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C YJR054WP47114 497 aa3.22□□□□□ -1.89
YIR040CYIR040C AIM24P47127 394 aa3.22□□□□□ -1.89
YIR040CYIR040C RPL4BP49626 362 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C CUL3P53202 744 aa3.22□□□□□ -1.89
YIR040CYIR040C MTL1P53214 551 aa3.22□□□□□ -1.89
YIR040CYIR040C DRN1P53255 507 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C OKP1P53298 406 aa3.22□□□□□ -1.89
YIR040CYIR040C GND2P53319 492 aa3.22□□□□□ -1.89
YIR040CYIR040C CWC25P53854 179 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C ARG5,6Q01217 863 aa3.22□□□□□ -1.89
YIR040CYIR040C YSA1Q01976 231 aa3.22□□□□□ -1.89
YIR040CYIR040C SNX41Q04053 625 aa3.22□□□□□ -1.89
YIR040CYIR040C YMR114CQ04471 368 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C RGC1Q06108 1083 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C ATG33Q06485 197 aa3.22□□□□□ -1.89
YIR040CYIR040C ATG23Q06671 453 aa3.22□□□□□ -1.89
YIR040CYIR040C YLR001CQ07895 862 aa3.22□□□□□ -1.89
YIR040CYIR040C LYS21Q12122 440 aaKnown RBP3.22□□□□□ -1.89
YIR040CYIR040C PSY3Q12318 242 aa3.22□□□□□ -1.89
YIR040CYIR040C SNF8Q12483 233 aa3.22□□□□□ -1.89
YIR040CYIR040C TAD3Q9URQ3 322 aa3.22□□□□□ -1.89
YIR040CYIR040C MHP1P43638 1398 aa3.22□□□□□ -1.89
YIR040CYIR040C SNT2P53127 1403 aa3.21□□□□□ -1.9
YIR040CYIR040C GCN4P03069 281 aa3.21□□□□□ -1.9
YIR040CYIR040C RNR2P09938 399 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C OLE1P21147 510 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C PHO3P24031 467 aa3.21□□□□□ -1.9
YIR040CYIR040C RAD57P25301 460 aa3.21□□□□□ -1.9
YIR040CYIR040C RBK1P25332 333 aa3.21□□□□□ -1.9
YIR040CYIR040C CSM1P25651 190 aa3.21□□□□□ -1.9
YIR040CYIR040C CIN8P27895 1000 aa3.21□□□□□ -1.9
YIR040CYIR040C RAD14P28519 371 aa3.21□□□□□ -1.9
YIR040CYIR040C SEC65P29478 273 aa3.21□□□□□ -1.9
YIR040CYIR040C MCM4P30665 933 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C PRO3P32263 286 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C ERG3P32353 365 aa3.21□□□□□ -1.9
YIR040CYIR040C SSE2P32590 693 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C TCA17P32613 152 aa3.21□□□□□ -1.9
YIR040CYIR040C MNS1P32906 549 aa3.21□□□□□ -1.9
YIR040CYIR040C HIS7P33734 552 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C MRPL10P36520 322 aa3.21□□□□□ -1.9
YIR040CYIR040C HEK2P38199 381 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
YIR040CYIR040C FES1P38260 290 aa3.21□□□□□ -1.9
YIR040CYIR040C HSL7P38274 827 aa3.21□□□□□ -1.9
YIR040CYIR040C TDP1P38319 544 aa3.21□□□□□ -1.9
YIR040CYIR040C PCM1P38628 557 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C AIM2P39721 246 aa3.21□□□□□ -1.9
YIR040CYIR040C RGI1P40043 161 aaPredicted RBP3.21□□□□□ -1.9
YIR040CYIR040C ATM1P40416 690 aa3.21□□□□□ -1.9
YIR040CYIR040C FMC1P40491 155 aa3.21□□□□□ -1.9
YIR040CYIR040C NAS2P40555 220 aa3.21□□□□□ -1.9
YIR040CYIR040C SSU1P41930 458 aa3.21□□□□□ -1.9
YIR040CYIR040C PRP24P49960 444 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C IMD3P50095 523 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C MRK1P50873 501 aa3.21□□□□□ -1.9
YIR040CYIR040C UBC11P52492 156 aa3.21□□□□□ -1.9
YIR040CYIR040C GPG1P53130 126 aa3.21□□□□□ -1.9
YIR040CYIR040C SLD3P53135 668 aa3.21□□□□□ -1.9
YIR040CYIR040C VOA1P53262 265 aa3.21□□□□□ -1.9
YIR040CYIR040C NOP13P53883 403 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
YIR040CYIR040C CTF19Q02732 369 aa3.21□□□□□ -1.9
YIR040CYIR040C PET117Q02771 107 aa3.21□□□□□ -1.9
YIR040CYIR040C NGL2Q03264 515 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C RPN9Q04062 393 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C BUD22Q04347 519 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C MRPL1Q04599 285 aa3.21□□□□□ -1.9
YIR040CYIR040C SWF1Q04629 336 aa3.21□□□□□ -1.9
YIR040CYIR040C YLR297WQ05899 129 aa3.21□□□□□ -1.9
YIR040CYIR040C YPR127WQ06494 345 aa3.21□□□□□ -1.9
YIR040CYIR040C YPR147CQ06522 304 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C HBT1Q07653 1046 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C TCO89Q08921 799 aa3.21□□□□□ -1.9
YIR040CYIR040C THP3Q12049 470 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C PSF3Q12146 194 aa3.21□□□□□ -1.9
YIR040CYIR040C BBP1Q12365 385 aa3.21□□□□□ -1.9
YIR040CYIR040C RVB2Q12464 471 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C HRP1Q99383 534 aaKnown RBP3.21□□□□□ -1.9
YIR040CYIR040C LEU2P04173 364 aaPredicted RBP3.2□□□□□ -1.9
YIR040CYIR040C HXK2P04807 486 aaKnown RBP3.2□□□□□ -1.9
YIR040CYIR040C CDC24P11433 854 aaPredicted RBP3.2□□□□□ -1.9
YIR040CYIR040C MDH1P17505 334 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
YIR040CYIR040C ATP12P22135 325 aa3.2□□□□□ -1.9
YIR040CYIR040C SNT1P25357 1226 aa3.2□□□□□ -1.9
YIR040CYIR040C ADK2P26364 225 aa3.2□□□□□ -1.9
YIR040CYIR040C SUI1P32911 108 aaKnown RBP3.2□□□□□ -1.9
YIR040CYIR040C YOX1P34161 385 aa3.2□□□□□ -1.9
YIR040CYIR040C AST1P35183 429 aa3.2□□□□□ -1.9
YIR040CYIR040C MYO3P36006 1272 aa3.2□□□□□ -1.9
YIR040CYIR040C SNU114P36048 1008 aaKnown RBP3.2□□□□□ -1.9
YIR040CYIR040C HEL1P36113 551 aa3.2□□□□□ -1.9
YIR040CYIR040C ALY1P36117 915 aa3.2□□□□□ -1.9
YIR040CYIR040C AAP1P37898 856 aaKnown RBP3.2□□□□□ -1.9
YIR040CYIR040C CDS1P38221 457 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 119.1 ms