RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W RPC11Q04307 110 aaPredicted RBP2.73□□□□□ -1.97
CIC1YHR052W NMD4Q12129 218 aa2.73□□□□□ -1.97
CIC1YHR052W HUA2Q12134 243 aa2.73□□□□□ -1.97
CIC1YHR052W RLM1Q12224 676 aa2.73□□□□□ -1.97
CIC1YHR052W MES1P00958 751 aaKnown RBP2.72□□□□□ -1.97
CIC1YHR052W HSC82P15108 705 aaKnown RBP2.72□□□□□ -1.97
CIC1YHR052W PRP2P20095 876 aaPredicted RBP2.72□□□□□ -1.97
CIC1YHR052W PAP1P29468 568 aaKnown RBP2.72□□□□□ -1.97
CIC1YHR052W SSH4P32343 579 aa2.72□□□□□ -1.97
CIC1YHR052W MCM10P32354 571 aa2.72□□□□□ -1.97
CIC1YHR052W MFT1P33441 392 aaKnown RBP2.72□□□□□ -1.97
CIC1YHR052W TCD2P36101 447 aaKnown RBP2.72□□□□□ -1.97
CIC1YHR052W MUM2P38236 366 aa2.72□□□□□ -1.97
CIC1YHR052W MSR1P38714 643 aa2.72□□□□□ -1.97
CIC1YHR052W NDT80P38830 627 aa2.72□□□□□ -1.97
CIC1YHR052W RRT5P43607 289 aa2.72□□□□□ -1.97
CIC1YHR052W SDT1P53078 280 aa2.72□□□□□ -1.97
CIC1YHR052W ZPR1P53303 486 aaKnown RBP2.72□□□□□ -1.97
CIC1YHR052W PBA1Q05778 276 aa2.72□□□□□ -1.97
CIC1YHR052W TMS1Q12116 473 aa2.72□□□□□ -1.97
CIC1YHR052W HHF1P02309 103 aaKnown RBP2.71□□□□□ -1.98
CIC1YHR052W COR1P07256 457 aa2.71□□□□□ -1.98
CIC1YHR052W CHS1P08004 1131 aa2.71□□□□□ -1.98
CIC1YHR052W ISY1P21374 235 aaPredicted RBP2.71□□□□□ -1.98
CIC1YHR052W DPB3P27344 201 aa2.71□□□□□ -1.98
CIC1YHR052W PAH1P32567 862 aa2.71□□□□□ -1.98
CIC1YHR052W PAD1P33751 242 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
CIC1YHR052W PTH1P38876 190 aaKnown RBP2.71□□□□□ -1.98
CIC1YHR052W AVT4P50944 713 aa2.71□□□□□ -1.98
CIC1YHR052W RTS3P53289 263 aa2.71□□□□□ -1.98
CIC1YHR052W FIN1Q03898 291 aa2.71□□□□□ -1.98
CIC1YHR052W RRN11Q04712 507 aa2.71□□□□□ -1.98
CIC1YHR052W PAL1Q05518 499 aaKnown RBP2.71□□□□□ -1.98
CIC1YHR052W ESA1Q08649 445 aa2.71□□□□□ -1.98
CIC1YHR052W RAV1P47104 1357 aa2.71□□□□□ -1.98
CIC1YHR052W PRD1P25375 712 aa2.7□□□□□ -1.98
CIC1YHR052W BUB3P26449 341 aa2.7□□□□□ -1.98
CIC1YHR052W ARO2P28777 376 aaKnown RBP2.7□□□□□ -1.98
CIC1YHR052W ATP11P32453 318 aa2.7□□□□□ -1.98
CIC1YHR052W SPR1P32603 445 aa2.7□□□□□ -1.98
CIC1YHR052W FRE2P36033 711 aa2.7□□□□□ -1.98
CIC1YHR052W MTC6P38849 526 aa2.7□□□□□ -1.98
CIC1YHR052W ERP2P39704 215 aa2.7□□□□□ -1.98
CIC1YHR052W YFL067WP43537 175 aa2.7□□□□□ -1.98
CIC1YHR052W SEM1O94742 89 aa2.69□□□□□ -1.98
CIC1YHR052W SUP35P05453 685 aaKnown RBP2.69□□□□□ -1.98
CIC1YHR052W SEC53P07283 254 aaKnown RBP2.69□□□□□ -1.98
CIC1YHR052W NDI1P32340 513 aa2.69□□□□□ -1.98
CIC1YHR052W HXT1P32465 570 aa2.69□□□□□ -1.98
CIC1YHR052W MBB1P39534 108 aa2.69□□□□□ -1.98
CIC1YHR052W SGN1P40561 250 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
CIC1YHR052W REE1P40893 198 aa2.69□□□□□ -1.98
CIC1YHR052W ART5P53244 586 aaKnown RBP2.69□□□□□ -1.98
CIC1YHR052W MHR1Q06630 226 aa2.69□□□□□ -1.98
CIC1YHR052W MRPL35Q06678 367 aa2.69□□□□□ -1.98
CIC1YHR052W TMC1Q08422 150 aaPredicted RBP2.69□□□□□ -1.98
CIC1YHR052W THP3Q12049 470 aaKnown RBP2.69□□□□□ -1.98
CIC1YHR052W YJR112W-AQ3E743 109 aa2.69□□□□□ -1.98
CIC1YHR052W BRR1Q99177 341 aaPredicted RBP2.69□□□□□ -1.98
CIC1YHR052W CRM1P30822 1084 aaKnown RBP2.68□□□□□ -1.98
CIC1YHR052W WBP1P33767 430 aaKnown RBP2.68□□□□□ -1.98
CIC1YHR052W RSM22P36056 628 aa2.68□□□□□ -1.98
CIC1YHR052W NAT2P37293 288 aa2.68□□□□□ -1.98
CIC1YHR052W SWD3P38123 315 aa2.68□□□□□ -1.98
CIC1YHR052W KEL1P38853 1164 aaKnown RBP2.68□□□□□ -1.98
CIC1YHR052W SYG1P40528 902 aa2.68□□□□□ -1.98
CIC1YHR052W YGR066CP53242 292 aa2.68□□□□□ -1.98
CIC1YHR052W OGG1P53397 376 aaPredicted RBP2.68□□□□□ -1.98
CIC1YHR052W SLG1P54867 378 aa2.68□□□□□ -1.98
CIC1YHR052W MFB1Q04922 465 aa2.68□□□□□ -1.98
CIC1YHR052W RRG7Q08774 242 aaPredicted RBP2.68□□□□□ -1.98
CIC1YHR052W CTI6Q08923 506 aa2.68□□□□□ -1.98
CIC1YHR052W HRT3Q12347 344 aa2.68□□□□□ -1.98
CIC1YHR052W CLN3P13365 580 aa2.67□□□□□ -1.98
CIC1YHR052W CPR4P25334 318 aa2.67□□□□□ -1.98
CIC1YHR052W GLC7P32598 312 aaKnown RBP2.67□□□□□ -1.98
CIC1YHR052W REG2P38232 338 aa2.67□□□□□ -1.98
CIC1YHR052W MRX6P48564 524 aa2.67□□□□□ -1.98
CIC1YHR052W YGL039WP53183 348 aaKnown RBP2.67□□□□□ -1.98
CIC1YHR052W POP6P53218 158 aa2.67□□□□□ -1.98
CIC1YHR052W IBD2P53892 351 aa2.67□□□□□ -1.98
CIC1YHR052W VPS38Q05919 439 aa2.67□□□□□ -1.98
CIC1YHR052W RCN2Q12044 265 aa2.67□□□□□ -1.98
CIC1YHR052W AVL9Q12500 764 aa2.67□□□□□ -1.98
CIC1YHR052W SOD1P00445 154 aaKnown RBP2.66□□□□□ -1.98
CIC1YHR052W GAL80P04387 435 aa2.66□□□□□ -1.98
CIC1YHR052W CBS1P14066 229 aa2.66□□□□□ -1.98
CIC1YHR052W NOP16P40007 231 aaKnown RBP2.66□□□□□ -1.98
CIC1YHR052W URB2P47108 1174 aa2.66□□□□□ -1.98
CIC1YHR052W TIS11P47977 285 aa2.66□□□□□ -1.98
CIC1YHR052W UPF3P48412 387 aaKnown RBP2.66□□□□□ -1.98
CIC1YHR052W CAF130P53280 1122 aaPredicted RBP2.66□□□□□ -1.98
CIC1YHR052W TSR1Q07381 788 aaKnown RBP2.66□□□□□ -1.98
CIC1YHR052W DFR1P07807 211 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
CIC1YHR052W AAC3P18238 307 aa2.65□□□□□ -1.99
CIC1YHR052W OLE1P21147 510 aaKnown RBP2.65□□□□□ -1.99
CIC1YHR052W NOP4P37838 685 aaKnown RBP2.65□□□□□ -1.99
CIC1YHR052W YMR147WP40218 223 aaKnown RBP2.65□□□□□ -1.99
CIC1YHR052W POP1P41812 875 aa2.65□□□□□ -1.99
CIC1YHR052W OCA1P50946 238 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms