RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W WHI4Q07655 649 aaKnown RBP3.28□□□□□ -1.89
SIZ1YDR409W BBP1Q12365 385 aa3.28□□□□□ -1.89
SIZ1YDR409W PAB1P04147 577 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SIZ1YDR409W RSR1P13856 272 aa3.27□□□□□ -1.89
SIZ1YDR409W SNF5P18480 905 aa3.27□□□□□ -1.89
SIZ1YDR409W CDC42P19073 191 aa3.27□□□□□ -1.89
SIZ1YDR409W SAM2P19358 384 aaKnown RBP3.27□□□□□ -1.89
SIZ1YDR409W SPB1P25582 841 aaPredicted RBP3.27□□□□□ -1.89
SIZ1YDR409W KRE6P32486 720 aa3.27□□□□□ -1.89
SIZ1YDR409W UBP11P36026 717 aa3.27□□□□□ -1.89
SIZ1YDR409W OTU2P38747 307 aaKnown RBP3.27□□□□□ -1.89
SIZ1YDR409W MLH1P38920 769 aa3.27□□□□□ -1.89
SIZ1YDR409W FAA2P39518 744 aa3.27□□□□□ -1.89
SIZ1YDR409W FCY21P40039 528 aa3.27□□□□□ -1.89
SIZ1YDR409W TMN3P40071 706 aa3.27□□□□□ -1.89
SIZ1YDR409W RGI2P40188 164 aa3.27□□□□□ -1.89
SIZ1YDR409W HPM1P40481 377 aa3.27□□□□□ -1.89
SIZ1YDR409W NUP85P46673 744 aa3.27□□□□□ -1.89
SIZ1YDR409W GCD14P46959 383 aaPredicted RBP3.27□□□□□ -1.89
SIZ1YDR409W ALY2P47029 1046 aa3.27□□□□□ -1.89
SIZ1YDR409W TAH11P47112 604 aa3.27□□□□□ -1.89
SIZ1YDR409W BNA2P47125 453 aa3.27□□□□□ -1.89
SIZ1YDR409W HNT2P49775 206 aa3.27□□□□□ -1.89
SIZ1YDR409W ORC3P54790 616 aa3.27□□□□□ -1.89
SIZ1YDR409W MMT1Q03218 510 aa3.27□□□□□ -1.89
SIZ1YDR409W COA4Q05809 96 aa3.27□□□□□ -1.89
SIZ1YDR409W RSA1Q08932 381 aa3.27□□□□□ -1.89
SIZ1YDR409W PCL8Q08966 492 aa3.27□□□□□ -1.89
SIZ1YDR409W VPS54Q12071 889 aa3.27□□□□□ -1.89
SIZ1YDR409W HER1Q12276 1246 aa3.27□□□□□ -1.89
SIZ1YDR409W ARP6Q12509 438 aa3.27□□□□□ -1.89
SIZ1YDR409W YOR019WQ99248 730 aa3.27□□□□□ -1.89
SIZ1YDR409W PHO5P00635 467 aa3.27□□□□□ -1.89
SIZ1YDR409W KSS1P14681 368 aa3.27□□□□□ -1.89
SIZ1YDR409W RSC6P25632 483 aa3.27□□□□□ -1.89
SIZ1YDR409W ZIP1P31111 875 aa3.27□□□□□ -1.89
SIZ1YDR409W PGM1P33401 570 aaKnown RBP3.27□□□□□ -1.89
SIZ1YDR409W RMA1P36001 430 aaKnown RBP3.27□□□□□ -1.89
SIZ1YDR409W GPT2P36148 743 aa3.27□□□□□ -1.89
SIZ1YDR409W YRO2P38079 344 aa3.27□□□□□ -1.89
SIZ1YDR409W YBR259WP38338 688 aa3.27□□□□□ -1.89
SIZ1YDR409W AGP3P43548 558 aa3.27□□□□□ -1.89
SIZ1YDR409W MET12P46151 657 aa3.27□□□□□ -1.89
SIZ1YDR409W CPR7P47103 393 aa3.27□□□□□ -1.89
SIZ1YDR409W PPT1P53043 513 aa3.27□□□□□ -1.89
SIZ1YDR409W NOP19P53317 196 aaPredicted RBP3.27□□□□□ -1.89
SIZ1YDR409W RRN5Q02983 363 aa3.27□□□□□ -1.89
SIZ1YDR409W ROY1Q04847 553 aa3.27□□□□□ -1.89
SIZ1YDR409W FAR10Q06001 478 aa3.27□□□□□ -1.89
SIZ1YDR409W DUS4Q06063 367 aa3.27□□□□□ -1.89
SIZ1YDR409W DNL4Q08387 944 aaPredicted RBP3.27□□□□□ -1.89
SIZ1YDR409W GEP3Q08622 556 aa3.27□□□□□ -1.89
SIZ1YDR409W NCR1Q12200 1170 aa3.27□□□□□ -1.89
SIZ1YDR409W GLE1Q12315 538 aa3.27□□□□□ -1.89
SIZ1YDR409W EMP46Q12396 444 aa3.27□□□□□ -1.89
SIZ1YDR409W YIL002W-AQ3E7Z5 69 aa3.27□□□□□ -1.89
SIZ1YDR409W BRR1Q99177 341 aaPredicted RBP3.27□□□□□ -1.89
SIZ1YDR409W AI5_BETAQ9ZZX0 354 aa3.27□□□□□ -1.89
SIZ1YDR409W YLR358CO13565 187 aa3.26□□□□□ -1.89
SIZ1YDR409W MF(ALPHA)1P01149 165 aa3.26□□□□□ -1.89
SIZ1YDR409W URA3P03962 267 aa3.26□□□□□ -1.89
SIZ1YDR409W RHO1P06780 209 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W TCP1P12612 559 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W STE12P13574 688 aa3.26□□□□□ -1.89
SIZ1YDR409W FAR1P21268 830 aa3.26□□□□□ -1.89
SIZ1YDR409W CMK2P22517 447 aa3.26□□□□□ -1.89
SIZ1YDR409W VPS34P22543 875 aa3.26□□□□□ -1.89
SIZ1YDR409W DMC1P25453 334 aa3.26□□□□□ -1.89
SIZ1YDR409W VMA6P32366 345 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W CYS4P32582 507 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W CLG1P35190 452 aa3.26□□□□□ -1.89
SIZ1YDR409W MRX3P38172 270 aa3.26□□□□□ -1.89
SIZ1YDR409W PHO89P38361 574 aa3.26□□□□□ -1.89
SIZ1YDR409W FLC2P39719 783 aa3.26□□□□□ -1.89
SIZ1YDR409W SAW1P39735 261 aa3.26□□□□□ -1.89
SIZ1YDR409W YER158CP40095 573 aa3.26□□□□□ -1.89
SIZ1YDR409W KHA1P40309 873 aa3.26□□□□□ -1.89
SIZ1YDR409W LRO1P40345 661 aa3.26□□□□□ -1.89
SIZ1YDR409W FIS1P40515 155 aa3.26□□□□□ -1.89
SIZ1YDR409W GET1P53192 235 aa3.26□□□□□ -1.89
SIZ1YDR409W GAL83Q04739 417 aa3.26□□□□□ -1.89
SIZ1YDR409W YMR226CQ05016 267 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W GLO2Q05584 274 aa3.26□□□□□ -1.89
SIZ1YDR409W THI20Q08224 551 aa3.26□□□□□ -1.89
SIZ1YDR409W PUS7Q08647 676 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W SOG2Q08817 791 aa3.26□□□□□ -1.89
SIZ1YDR409W MOT1P32333 1867 aa3.26□□□□□ -1.89
SIZ1YDR409W CAR1P00812 333 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W ATP6P00854 259 aa3.26□□□□□ -1.89
SIZ1YDR409W GCN4P03069 281 aa3.26□□□□□ -1.89
SIZ1YDR409W TPK2P06245 380 aa3.26□□□□□ -1.89
SIZ1YDR409W CAR2P07991 424 aaKnown RBP3.26□□□□□ -1.89
SIZ1YDR409W CTR86P25355 563 aa3.26□□□□□ -1.89
SIZ1YDR409W AEP1P32493 518 aa3.26□□□□□ -1.89
SIZ1YDR409W BCS1P32839 456 aa3.26□□□□□ -1.89
SIZ1YDR409W TOS1P38288 455 aa3.26□□□□□ -1.89
SIZ1YDR409W BZZ1P38822 633 aa3.26□□□□□ -1.89
SIZ1YDR409W MPT5P39016 859 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SIZ1YDR409W YJL206CP39529 758 aa3.26□□□□□ -1.89
SIZ1YDR409W DLD3P39976 496 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms