RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W UBR1P19812 1950 aa6.5□□□□□ -1.37
SWD1YAR003W MDM35O60200 86 aa6.5□□□□□ -1.37
SWD1YAR003W PMR1P13586 950 aa6.5□□□□□ -1.37
SWD1YAR003W VPS34P22543 875 aa6.5□□□□□ -1.37
SWD1YAR003W RAD14P28519 371 aa6.5□□□□□ -1.37
SWD1YAR003W COQ2P32378 372 aa6.5□□□□□ -1.37
SWD1YAR003W CBF5P33322 483 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
SWD1YAR003W SDH3P33421 198 aa6.5□□□□□ -1.37
SWD1YAR003W MAE1P36013 669 aaKnown RBP6.5□□□□□ -1.37
SWD1YAR003W SRX1P36077 127 aa6.5□□□□□ -1.37
SWD1YAR003W UBA4P38820 440 aa6.5□□□□□ -1.37
SWD1YAR003W YHR127WP38833 243 aaKnown RBP6.5□□□□□ -1.37
SWD1YAR003W PCF11P39081 626 aaPredicted RBP6.5□□□□□ -1.37
SWD1YAR003W YEL073CP39974 107 aa6.5□□□□□ -1.37
SWD1YAR003W YEN1P40028 759 aa6.5□□□□□ -1.37
SWD1YAR003W TIF34P40217 347 aaKnown RBP6.5□□□□□ -1.37
SWD1YAR003W GCD10P41814 478 aa6.5□□□□□ -1.37
SWD1YAR003W PFA3P42836 336 aa6.5□□□□□ -1.37
SWD1YAR003W GAT1P43574 510 aa6.5□□□□□ -1.37
SWD1YAR003W YJR154WP47181 346 aa6.5□□□□□ -1.37
SWD1YAR003W MTR3P48240 250 aaPredicted RBP6.5□□□□□ -1.37
SWD1YAR003W MPS2P53159 387 aa6.5□□□□□ -1.37
SWD1YAR003W YGR015CP53208 328 aa6.5□□□□□ -1.37
SWD1YAR003W YML053CQ04978 212 aa6.5□□□□□ -1.37
SWD1YAR003W YDR338CQ05497 695 aa6.5□□□□□ -1.37
SWD1YAR003W ESA1Q08649 445 aa6.5□□□□□ -1.37
SWD1YAR003W UAF30Q08747 228 aa6.5□□□□□ -1.37
SWD1YAR003W ATG29Q12092 213 aa6.5□□□□□ -1.37
SWD1YAR003W HSH49Q99181 213 aaPredicted RBP6.5□□□□□ -1.37
SWD1YAR003W PHO5P00635 467 aa6.49□□□□□ -1.37
SWD1YAR003W STE3P06783 470 aa6.49□□□□□ -1.37
SWD1YAR003W DBR1P24309 405 aaKnown RBP6.49□□□□□ -1.37
SWD1YAR003W LRG1P35688 1017 aa6.49□□□□□ -1.37
SWD1YAR003W INM1P38710 295 aa6.49□□□□□ -1.37
SWD1YAR003W GIP4P39732 760 aa6.49□□□□□ -1.37
SWD1YAR003W MET18P40469 1032 aa6.49□□□□□ -1.37
SWD1YAR003W MDJ2P42834 146 aa6.49□□□□□ -1.37
SWD1YAR003W YJR030CP47101 745 aa6.49□□□□□ -1.37
SWD1YAR003W TIS11P47977 285 aa6.49□□□□□ -1.37
SWD1YAR003W USE1P53146 245 aa6.49□□□□□ -1.37
SWD1YAR003W YGR053CP53234 283 aa6.49□□□□□ -1.37
SWD1YAR003W HAS1Q03532 505 aaKnown RBP6.49□□□□□ -1.37
SWD1YAR003W SGT1Q08446 395 aa6.49□□□□□ -1.37
SWD1YAR003W DIA2Q08496 732 aaPredicted RBP6.49□□□□□ -1.37
SWD1YAR003W YPR011CQ12251 326 aa6.49□□□□□ -1.37
SWD1YAR003W RGT2Q12300 763 aa6.49□□□□□ -1.37
SWD1YAR003W PST1Q12355 444 aa6.49□□□□□ -1.37
SWD1YAR003W RIB2Q12362 591 aaKnown RBP6.49□□□□□ -1.37
SWD1YAR003W SPT3P06844 337 aa6.48□□□□□ -1.37
SWD1YAR003W TUB1P09733 447 aaKnown RBP6.48□□□□□ -1.37
SWD1YAR003W RED1P14291 827 aa6.48□□□□□ -1.37
SWD1YAR003W CLN2P20438 545 aa6.48□□□□□ -1.37
SWD1YAR003W YSR3P23501 404 aa6.48□□□□□ -1.37
SWD1YAR003W ZIP1P31111 875 aa6.48□□□□□ -1.37
SWD1YAR003W DGR2P32330 852 aa6.48□□□□□ -1.37
SWD1YAR003W PDB1P32473 366 aaKnown RBP6.48□□□□□ -1.37
SWD1YAR003W SIP2P34164 415 aaKnown RBP6.48□□□□□ -1.37
SWD1YAR003W VPS21P36017 210 aaKnown RBP6.48□□□□□ -1.37
SWD1YAR003W YBL029WP38201 376 aa6.48□□□□□ -1.37
SWD1YAR003W BMT2P38278 337 aa6.48□□□□□ -1.37
SWD1YAR003W DED81P38707 554 aaKnown RBP6.48□□□□□ -1.37
SWD1YAR003W NDE1P40215 560 aa6.48□□□□□ -1.37
SWD1YAR003W GCV1P48015 400 aa6.48□□□□□ -1.37
SWD1YAR003W GTO1P48239 356 aa6.48□□□□□ -1.37
SWD1YAR003W YPT32P51996 222 aaKnown RBP6.48□□□□□ -1.37
SWD1YAR003W ARC35P53731 342 aaKnown RBP6.48□□□□□ -1.37
SWD1YAR003W GAS3Q03655 524 aa6.48□□□□□ -1.37
SWD1YAR003W VHS1Q03785 461 aa6.48□□□□□ -1.37
SWD1YAR003W YMR034CQ05131 434 aaPredicted RBP6.48□□□□□ -1.37
SWD1YAR003W BSC2Q05611 235 aa6.48□□□□□ -1.37
SWD1YAR003W BCP1Q06338 283 aa6.48□□□□□ -1.37
SWD1YAR003W HUA2Q12134 243 aa6.48□□□□□ -1.37
SWD1YAR003W CMR1Q12510 522 aaKnown RBP6.48□□□□□ -1.37
SWD1YAR003W YCL012CQ8J0M4 134 aa6.48□□□□□ -1.37
SWD1YAR003W FAB1P34756 2278 aa6.47□□□□□ -1.37
SWD1YAR003W ARD1P07347 238 aaPredicted RBP6.47□□□□□ -1.37
SWD1YAR003W LAT1P12695 482 aaKnown RBP6.47□□□□□ -1.37
SWD1YAR003W SCL1P21243 252 aaKnown RBP6.47□□□□□ -1.37
SWD1YAR003W PTC1P35182 281 aa6.47□□□□□ -1.37
SWD1YAR003W NTR2P36118 322 aaPredicted RBP6.47□□□□□ -1.37
SWD1YAR003W CAF4P36130 643 aa6.47□□□□□ -1.37
SWD1YAR003W YCR087C-AP37263 153 aa6.47□□□□□ -1.37
SWD1YAR003W TRM7P38238 310 aaKnown RBP6.47□□□□□ -1.37
SWD1YAR003W TRM5P38793 499 aa6.47□□□□□ -1.37
SWD1YAR003W YPT35P38815 214 aaKnown RBP6.47□□□□□ -1.37
SWD1YAR003W MET12P46151 657 aa6.47□□□□□ -1.37
SWD1YAR003W MPS3P47069 682 aa6.47□□□□□ -1.37
SWD1YAR003W MNN10P50108 393 aaKnown RBP6.47□□□□□ -1.37
SWD1YAR003W MIG2P53035 382 aa6.47□□□□□ -1.37
SWD1YAR003W COS12P53053 380 aa6.47□□□□□ -1.37
SWD1YAR003W COG2P53271 262 aa6.47□□□□□ -1.37
SWD1YAR003W YNL140CP53910 189 aa6.47□□□□□ -1.37
SWD1YAR003W PRP38Q00723 242 aaPredicted RBP6.47□□□□□ -1.37
SWD1YAR003W YDR476CQ03362 224 aa6.47□□□□□ -1.37
SWD1YAR003W YET2Q04210 160 aa6.47□□□□□ -1.37
SWD1YAR003W RAD34Q06665 692 aa6.47□□□□□ -1.37
SWD1YAR003W GPB1Q08886 897 aa6.47□□□□□ -1.37
SWD1YAR003W RTT10Q08924 1013 aa6.47□□□□□ -1.37
SWD1YAR003W YPR202WQ08993 238 aa6.47□□□□□ -1.37
SWD1YAR003W NSL1Q12143 216 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms