RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 LNPKQ9C0E8 428 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 NTMQ9P121 344 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 CGGBP1Q9UFW8 167 aaPredicted RBP5.88□□□□□ -1.47
LRRC28-218ENST00000560236 DUSP10Q9Y6W6 482 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 HMGXB3Q12766 1538 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 TRBV23OR9-2A0A075B6M9 112 aa5.87□□□□□ -1.47
LRRC28-218ENST00000560236 NPHP3-ACAD11A0A0J9YXS1 232 aa5.87□□□□□ -1.47
LRRC28-218ENST00000560236 PPP1R11O60927 126 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-218ENST00000560236 PAMP19021 973 aa5.87□□□□□ -1.47
LRRC28-218ENST00000560236 CACNB2Q08289 660 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-218ENST00000560236 PUM1Q14671 1186 aaKnown RBP eCLIP5.87□□□□□ -1.47
LRRC28-218ENST00000560236 WWC2Q6AWC2 1192 aa5.87□□□□□ -1.47
LRRC28-218ENST00000560236 ARHGEF39Q8N4T4 335 aa5.87□□□□□ -1.47
LRRC28-218ENST00000560236 ZBTB8AQ96BR9 441 aa5.87□□□□□ -1.47
LRRC28-218ENST00000560236 SPATA32Q96LK8 384 aa5.87□□□□□ -1.47
LRRC28-218ENST00000560236 TMPRSS5Q9H3S3 457 aa5.87□□□□□ -1.47
LRRC28-218ENST00000560236 EFR3BQ9Y2G0 817 aa5.87□□□□□ -1.47
LRRC28-218ENST00000560236 SMARCA2P51531 1590 aa5.86□□□□□ -1.47
LRRC28-218ENST00000560236 RBM10P98175 930 aaKnown RBP5.86□□□□□ -1.47
LRRC28-218ENST00000560236 PAK2Q13177 524 aa5.86□□□□□ -1.47
LRRC28-218ENST00000560236 GRB10Q13322 594 aa5.86□□□□□ -1.47
LRRC28-218ENST00000560236 TTLL7Q6ZT98 887 aa5.86□□□□□ -1.47
LRRC28-218ENST00000560236 ZNF654Q8IZM8 581 aa5.86□□□□□ -1.47
LRRC28-218ENST00000560236 C19orf47Q8N9M1 422 aaKnown RBP5.86□□□□□ -1.47
LRRC28-218ENST00000560236 RCC1LQ96I51 464 aaKnown RBP5.86□□□□□ -1.47
LRRC28-218ENST00000560236 SPATA6Q9NWH7 488 aaPredicted RBP5.86□□□□□ -1.47
LRRC28-218ENST00000560236 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.86□□□□□ -1.47
LRRC28-218ENST00000560236 SUGT1Q9Y2Z0 365 aa5.86□□□□□ -1.47
LRRC28-218ENST00000560236 PDS5BQ9NTI5 1447 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 A0A1W2PQH9 124 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 SMARCA5O60264 1052 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-218ENST00000560236 NPHS1O60500 1241 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 FUCA1P04066 466 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 CYP2C8P10632 490 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 MAGEA10P43363 369 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-218ENST00000560236 SOX9P48436 509 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 GIPRP48546 466 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 SMAD4Q13485 552 aaKnown RBP5.85□□□□□ -1.47
LRRC28-218ENST00000560236 ZNF761Q86XN6 746 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-218ENST00000560236 OR6P1Q8NGX9 317 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 DDX11Q96FC9 970 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 MYRFQ9Y2G1 1151 aa5.85□□□□□ -1.47
LRRC28-218ENST00000560236 C7orf72A4D263 438 aa5.84□□□□□ -1.47
LRRC28-218ENST00000560236 NTRK1P04629 796 aa5.84□□□□□ -1.47
LRRC28-218ENST00000560236 ITGB3P05106 788 aa5.84□□□□□ -1.47
LRRC28-218ENST00000560236 PPP2R5EQ16537 467 aa5.84□□□□□ -1.47
LRRC28-218ENST00000560236 KLHL6Q8WZ60 621 aa5.84□□□□□ -1.47
LRRC28-218ENST00000560236 SMPD4Q9NXE4 827 aa5.84□□□□□ -1.47
LRRC28-218ENST00000560236 SIT1Q9Y3P8 196 aa5.84□□□□□ -1.47
LRRC28-218ENST00000560236 DCP2Q8IU60 420 aaKnown RBP5.83□□□□□ -1.48
LRRC28-218ENST00000560236 LINC00482Q8N8I6 264 aa5.83□□□□□ -1.48
LRRC28-218ENST00000560236 ADAMTS17Q8TE56 1095 aa5.83□□□□□ -1.48
LRRC28-218ENST00000560236 AP5M1Q9H0R1 490 aa5.83□□□□□ -1.48
LRRC28-218ENST00000560236 CLEC1BQ9P126 229 aa5.83□□□□□ -1.48
LRRC28-218ENST00000560236 AKT3Q9Y243 479 aa5.83□□□□□ -1.48
LRRC28-218ENST00000560236 WDR62O43379 1518 aa5.83□□□□□ -1.48
LRRC28-218ENST00000560236 ATAD2BQ9ULI0 1458 aa5.83□□□□□ -1.48
LRRC28-218ENST00000560236 ANKRD34BA5PLL1 514 aa5.82□□□□□ -1.48
LRRC28-218ENST00000560236 SCAMP3O14828 347 aaKnown RBP5.82□□□□□ -1.48
LRRC28-218ENST00000560236 C8BP07358 591 aa5.82□□□□□ -1.48
LRRC28-218ENST00000560236 PLS3P13797 630 aa5.82□□□□□ -1.48
LRRC28-218ENST00000560236 KIAA1211LQ6NV74 962 aa5.82□□□□□ -1.48
LRRC28-218ENST00000560236 ETV3LQ6ZN32 361 aa5.82□□□□□ -1.48
LRRC28-218ENST00000560236 GPRASP2Q96D09 838 aa5.82□□□□□ -1.48
LRRC28-218ENST00000560236 GORASP1Q9BQQ3 440 aa5.82□□□□□ -1.48
LRRC28-218ENST00000560236 PCDH18Q9HCL0 1135 aa5.82□□□□□ -1.48
LRRC28-218ENST00000560236 MARCH2Q9P0N8 246 aa5.82□□□□□ -1.48
LRRC28-218ENST00000560236 KCNH1O95259 989 aa5.81□□□□□ -1.48
LRRC28-218ENST00000560236 ADAM17P78536 824 aa5.81□□□□□ -1.48
LRRC28-218ENST00000560236 RGL3Q3MIN7 710 aa5.81□□□□□ -1.48
LRRC28-218ENST00000560236 VHLLQ6RSH7 139 aa5.81□□□□□ -1.48
LRRC28-218ENST00000560236 PLEKHO2Q8TD55 490 aa5.81□□□□□ -1.48
LRRC28-218ENST00000560236 COPS5Q92905 334 aa5.81□□□□□ -1.48
LRRC28-218ENST00000560236 RBM15Q96T37 977 aaKnown RBP eCLIP5.81□□□□□ -1.48
LRRC28-218ENST00000560236 C11orf84Q9BUA3 381 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-218ENST00000560236 GPRC5CQ9NQ84 441 aa5.81□□□□□ -1.48
LRRC28-218ENST00000560236 BTG4Q9NY30 223 aa5.81□□□□□ -1.48
LRRC28-218ENST00000560236 APEX2Q9UBZ4 518 aa5.81□□□□□ -1.48
LRRC28-218ENST00000560236 ARHGEF11O15085 1522 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 MRC2Q9UBG0 1479 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 RPL13P26373 211 aaKnown RBP5.8□□□□□ -1.48
LRRC28-218ENST00000560236 THBS2P35442 1172 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 KIAA2012Q0VF49 1180 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 SCRN1Q12765 414 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 TMCO4Q5TGY1 634 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 MBLAC2Q68D91 279 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 POMZP3Q6PJE2 187 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 CD300LDQ6UXZ3 194 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 CRACR2BQ8N4Y2 399 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-218ENST00000560236 ZNF513Q8N8E2 541 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-218ENST00000560236 KYQ8NBH2 561 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 RASGRP4Q8TDF6 673 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 CPLX3Q8WVH0 158 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 DPF3Q92784 378 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 LOXL4Q96JB6 756 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 MMP19Q99542 508 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 SYT3Q9BQG1 590 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 EMC9Q9Y3B6 208 aa5.8□□□□□ -1.48
LRRC28-218ENST00000560236 SGSM2O43147 1006 aa5.79□□□□□ -1.48
LRRC28-218ENST00000560236 PLATP00750 562 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms