RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 DHX38Q92620 1227 aaKnown RBP16.6■□□□□ 0.25
NKX3-1-202ENST00000523261 ATOH1Q92858 354 aaPredicted RBP16.6■□□□□ 0.25
NKX3-1-202ENST00000523261 SAMD11Q96NU1 681 aa16.6■□□□□ 0.25
NKX3-1-202ENST00000523261 IRF2BPLQ9H1B7 796 aa16.6■□□□□ 0.25
NKX3-1-202ENST00000523261 IGKV6D-41A0A0C4DH26 115 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 A6NJR5 290 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 PROB1E7EW31 1015 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 GOLIM4O00461 696 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 ALAS1P13196 640 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 TRIM27P14373 513 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 DLX2Q07687 328 aaPredicted RBP16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 GPM6BQ13491 265 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 IKBKEQ14164 716 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 CLUL1Q15846 466 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 BRDTQ58F21 947 aaPredicted RBP16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 MUM1L1Q5H9M0 696 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 AACSQ86V21 672 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 MKL1Q969V6 931 aa16.59■□□□□ 0.25
NKX3-1-202ENST00000523261 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.25
NKX3-1-202ENST00000523261 MICAL3Q7RTP6 2002 aa16.58■□□□□ 0.25
NKX3-1-202ENST00000523261 GVINP1Q7Z2Y8 2422 aa16.58■□□□□ 0.25
NKX3-1-202ENST00000523261 STXBP3O00186 592 aa16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 NCK2O43639 380 aa16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 BMP3P12645 472 aa16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 VCPP55072 806 aaKnown RBP16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 ZXDAP98168 799 aa16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 GDF6Q6KF10 455 aaPredicted RBP16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 ASCL5Q7RTU5 278 aa16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 GMCL1P1Q8NEA9 526 aa16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 DDRGK1Q96HY6 314 aa16.58■□□□□ 0.24
NKX3-1-202ENST00000523261 COL4A6Q14031 1691 aa16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 RAD50Q92878 1312 aa16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 TMEM232C9JQI7 657 aa16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 CKBP12277 381 aa16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 ADD2P35612 726 aa16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 MKRN4PQ13434 485 aaPredicted RBP16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 SMAD4Q13485 552 aaKnown RBP16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 NSMFQ6X4W1 530 aa16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 SESTD1Q86VW0 696 aa16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 LRRC47Q8N1G4 583 aaKnown RBP16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 SYNPO2Q9UMS6 1093 aa16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
NKX3-1-202ENST00000523261 NKRFO15226 690 aaKnown RBP eCLIP16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 ALDH5A1P51649 535 aaPredicted RBP16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 STAT2P52630 851 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 CHMP4BP1P59074 171 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 MBTPS1Q14703 1052 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 SLFN13Q68D06 897 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 TRAF7Q6Q0C0 670 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 COPS5Q92905 334 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 CEP95Q96GE4 821 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 MKNK2Q9HBH9 465 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 MTMR4Q9NYA4 1195 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 ARPP21Q9UBL0 812 aaPredicted RBP16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 NLRC5Q86WI3 1866 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 EPG5Q9HCE0 2579 aa16.56■□□□□ 0.24
NKX3-1-202ENST00000523261 DMDP11532 3685 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 LOC102724159A0A0B4J2E5 919 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 PRR23AA6NEV1 266 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 H0Y858 1186 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 TBX10O75333 385 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 CHGBP05060 677 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 AVPR2P30518 371 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 HYAL1Q12794 435 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 PPP2R5BQ15173 497 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 PWP2Q15269 919 aaKnown RBP16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 FAM160B2Q86V87 743 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 FBXO11Q86XK2 927 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 TMEM192Q8IY95 271 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 STK11IPQ8N1F8 1099 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 CHURC1Q8WUH1 139 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 FSD1Q9BTV5 496 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 TLR9Q9NR96 1032 aa16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 ADD3Q9UEY8 706 aaKnown RBP16.55■□□□□ 0.24
NKX3-1-202ENST00000523261 AMHP03971 560 aa16.54■□□□□ 0.24
NKX3-1-202ENST00000523261 ID4P47928 161 aa16.54■□□□□ 0.24
NKX3-1-202ENST00000523261 MYOCDQ8IZQ8 938 aa16.54■□□□□ 0.24
NKX3-1-202ENST00000523261 STAG1Q8WVM7 1258 aa16.54■□□□□ 0.24
NKX3-1-202ENST00000523261 CLUAP1Q96AJ1 413 aa16.54■□□□□ 0.24
NKX3-1-202ENST00000523261 TRPC6Q9Y210 931 aa16.54■□□□□ 0.24
NKX3-1-202ENST00000523261 RALGAPA2Q2PPJ7 1873 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 ANP32CO43423 234 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 LGR5O75473 907 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 TTLL1O95922 423 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 SNAP25P60880 206 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 SIGLEC14Q08ET2 396 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 BAATQ14032 418 aaPredicted RBP16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 SBK1Q52WX2 424 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 SCFD2Q8WU76 684 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 ASIC4Q96FT7 647 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 CD207Q9UJ71 328 aa16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 ISY1Q9ULR0 285 aaKnown RBP16.53■□□□□ 0.24
NKX3-1-202ENST00000523261 LOC730098B7Z3J9 87 aa16.52■□□□□ 0.24
NKX3-1-202ENST00000523261 IPO8O15397 1037 aaKnown RBP16.52■□□□□ 0.24
NKX3-1-202ENST00000523261 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.24
NKX3-1-202ENST00000523261 CBX2Q14781 532 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms