RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 FDX1P10109 184 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 ATF7P17544 494 aaPredicted RBP8.81□□□□□ -1
BRCC3-208ENST00000453705 GRM3Q14832 879 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 RAB3GAP1Q15042 981 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 HSP90B2PQ58FF3 399 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 RILPL1Q5EBL4 403 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 ARMC4Q5T2S8 1044 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 USPL1Q5W0Q7 1092 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 OTUD6AQ7L8S5 288 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 HS2ST1Q7LGA3 356 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 SYTL4Q96C24 671 aaPredicted RBP8.81□□□□□ -1
BRCC3-208ENST00000453705 ANKEF1Q9NU02 776 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 PGAP2Q9UHJ9 254 aa8.81□□□□□ -1
BRCC3-208ENST00000453705 LRRC37AA6NMS7 1700 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 COL9A1P20849 921 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 SOX11P35716 441 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 PLCB4Q15147 1175 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 INTS5Q6P9B9 1019 aaKnown RBP8.8□□□□□ -1
BRCC3-208ENST00000453705 LDHAL6AQ6ZMR3 332 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 UBE3BQ7Z3V4 1068 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 NLRP10Q86W26 655 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 SEPT12Q8IYM1 358 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 NKAIN3Q8N8D7 197 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 PXYLP1Q8TE99 480 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 MYH15Q9Y2K3 1946 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 NRXN2Q9P2S2 1712 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 PNMA6FA0A0J9YX94 578 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 ESPNB1AK53 854 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 FAM155AB1AL88 458 aaPredicted RBP8.8□□□□□ -1
BRCC3-208ENST00000453705 F5H423 210 aaPredicted RBP8.8□□□□□ -1
BRCC3-208ENST00000453705 FOXN3O00409 490 aaPredicted RBP8.8□□□□□ -1
BRCC3-208ENST00000453705 PMM2O15305 246 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 FBXO45P0C2W1 286 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 HMGB2P26583 209 aaKnown RBP8.8□□□□□ -1
BRCC3-208ENST00000453705 HOXD10P28358 340 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 RBM6P78332 1123 aaKnown RBP8.8□□□□□ -1
BRCC3-208ENST00000453705 AACSQ86V21 672 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 NUTM1Q86Y26 1132 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 GSDMBQ8TAX9 411 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 ELAC2Q9BQ52 826 aaKnown RBP8.8□□□□□ -1
BRCC3-208ENST00000453705 LZTS2Q9BRK4 669 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 DBNDD1Q9H9R9 158 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 EPB41L4AQ9HCS5 686 aaPredicted RBP8.8□□□□□ -1
BRCC3-208ENST00000453705 IL1RAPL2Q9NP60 686 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 ATP8A2Q9NTI2 1148 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 PDRG1Q9NUG6 133 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 ZFATQ9P243 1243 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 SNCAIPQ9Y6H5 919 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 CHD4Q14839 1912 aa8.8□□□□□ -1
BRCC3-208ENST00000453705 RAD52P43351 418 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 MAP3K9P80192 1104 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 PDE1CQ14123 709 aaPredicted RBP8.79□□□□□ -1
BRCC3-208ENST00000453705 DAAM2Q86T65 1068 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 SIX5Q8N196 739 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 TAB3Q8N5C8 712 aaPredicted RBP8.79□□□□□ -1
BRCC3-208ENST00000453705 ACSBG1Q96GR2 724 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 ZFYVE28Q9HCC9 887 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 EIF2B4Q9UI10 523 aaKnown RBP8.79□□□□□ -1
BRCC3-208ENST00000453705 PA2G4Q9UQ80 394 aaKnown RBP8.79□□□□□ -1
BRCC3-208ENST00000453705 MYH13Q9UKX3 1938 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
BRCC3-208ENST00000453705 DKK1O94907 266 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 HNRNPCP07910 306 aaKnown RBP eCLIP8.79□□□□□ -1
BRCC3-208ENST00000453705 POLR2BP30876 1174 aaKnown RBP8.79□□□□□ -1
BRCC3-208ENST00000453705 PFKPQ01813 784 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 SLC20A2Q08357 652 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 SPATC1Q76KD6 591 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 RNF180Q86T96 592 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 ZNF454Q8N9F8 522 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 TPCN2Q8NHX9 752 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 CHAC2Q8WUX2 184 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 BAP1Q92560 729 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 PRKD2Q9BZL6 878 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 NUCKS1Q9H1E3 243 aaKnown RBP8.79□□□□□ -1
BRCC3-208ENST00000453705 PIH1D1Q9NWS0 290 aaKnown RBP8.79□□□□□ -1
BRCC3-208ENST00000453705 HMG20BQ9P0W2 317 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.79□□□□□ -1
BRCC3-208ENST00000453705 PTCH2Q9Y6C5 1203 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 CARMIL3Q8ND23 1372 aa8.79□□□□□ -1
BRCC3-208ENST00000453705 GOLGA6L3A6NEY3 463 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 SFI1A8K8P3 1242 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 RPL17P18621 184 aaKnown RBP8.78□□□□□ -1
BRCC3-208ENST00000453705 CACNB1Q02641 598 aaPredicted RBP8.78□□□□□ -1
BRCC3-208ENST00000453705 LMBR1LQ6UX01 489 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 SRLQ86TD4 932 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 C7orf61Q8IZ16 206 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 MAP4K1Q92918 833 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 TRIM11Q96F44 468 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 RBM42Q9BTD8 480 aaKnown RBP8.78□□□□□ -1
BRCC3-208ENST00000453705 RPAP3Q9H6T3 665 aaPredicted RBP8.78□□□□□ -1
BRCC3-208ENST00000453705 DBNLQ9UJU6 430 aaKnown RBP8.78□□□□□ -1
BRCC3-208ENST00000453705 LOC102724428A0A0B4J2F2 783 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 SERTM1A2A2V5 107 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 MYBP10242 640 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 KRT10P13645 584 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 ZSCAN20P17040 1043 aaPredicted RBP8.78□□□□□ -1
BRCC3-208ENST00000453705 SIK1P57059 783 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 SLC6A19Q695T7 634 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 TEX11Q8IYF3 940 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 FAM169BQ8N8A8 192 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms