RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 SH3TC2Q8TF17 1288 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 RBBP6Q7Z6E9 1792 aaKnown RBP20.51■□□□□ 0.87
CLK2-202ENST00000361168 ZNF236Q9UL36 1845 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 KIF28PB7ZC32 967 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 GNRH1P01148 92 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 XBP1P17861 261 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 SYT1P21579 422 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 HOXD10P28358 340 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 GNA11P29992 359 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 ANP32AP39687 249 aaKnown RBP20.51■□□□□ 0.87
CLK2-202ENST00000361168 BECN1Q14457 450 aa20.51■□□□□ 0.87
CLK2-202ENST00000361168 CTU1Q7Z7A3 348 aaKnown RBP20.51■□□□□ 0.87
CLK2-202ENST00000361168 EDIL3O43854 480 aa20.5■□□□□ 0.87
CLK2-202ENST00000361168 ADCY3O60266 1144 aa20.5■□□□□ 0.87
CLK2-202ENST00000361168 IGHA2P01877 340 aa20.5■□□□□ 0.87
CLK2-202ENST00000361168 XRCC5P13010 732 aaKnown RBP20.5■□□□□ 0.87
CLK2-202ENST00000361168 TRIM29Q14134 588 aa20.5■□□□□ 0.87
CLK2-202ENST00000361168 PLXNA1Q9UIW2 1896 aa20.5■□□□□ 0.87
CLK2-202ENST00000361168 MCM3APO60318 1980 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 SNAI1O95863 264 aaPredicted RBP20.49■□□□□ 0.87
CLK2-202ENST00000361168 IRF5Q13568 498 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 ARHGEF16Q5VV41 709 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 TNFRSF25Q93038 417 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 PDCD2LQ9BRP1 358 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 TINF2Q9BSI4 451 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 ANO3Q9BYT9 981 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 PRDM10Q9NQV6 1147 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 SPDYE3A6NKU9 549 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 MYCP01106 439 aaPredicted RBP20.49■□□□□ 0.87
CLK2-202ENST00000361168 PTGS1P23219 599 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 PGM5Q15124 567 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 TMEM63BQ5T3F8 832 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 ARMCX2Q7L311 632 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 DAGLBQ8NCG7 672 aa20.49■□□□□ 0.87
CLK2-202ENST00000361168 MAP3K20Q9NYL2 800 aaKnown RBP20.49■□□□□ 0.87
CLK2-202ENST00000361168 MYCLP12524 364 aaPredicted RBP20.48■□□□□ 0.87
CLK2-202ENST00000361168 ARHGEF6Q15052 776 aa20.48■□□□□ 0.87
CLK2-202ENST00000361168 NSUN6Q8TEA1 469 aaKnown RBP20.48■□□□□ 0.87
CLK2-202ENST00000361168 DIS3Q9Y2L1 958 aaKnown RBP20.48■□□□□ 0.87
CLK2-202ENST00000361168 RPTORQ8N122 1335 aa20.48■□□□□ 0.87
CLK2-202ENST00000361168 WNT7AO00755 349 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 NR3C2P08235 984 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 KRT2P35908 639 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 MRPS9P82933 396 aaKnown RBP20.47■□□□□ 0.87
CLK2-202ENST00000361168 PIK3AP1Q6ZUJ8 805 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 DNERQ8NFT8 737 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 CYP2W1Q8TAV3 490 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 RTEL1Q9NZ71 1219 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 VPS37CA5D8V6 355 aaPredicted RBP20.47■□□□□ 0.87
CLK2-202ENST00000361168 RGS20O76081 388 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 EDNRBP24530 442 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 MAMDC4Q6UXC1 1216 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 FERMT3Q86UX7 667 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 FBXO16Q8IX29 292 aaPredicted RBP20.47■□□□□ 0.87
CLK2-202ENST00000361168 BICD2Q8TD16 824 aa20.47■□□□□ 0.87
CLK2-202ENST00000361168 ADD3Q9UEY8 706 aaKnown RBP20.47■□□□□ 0.87
CLK2-202ENST00000361168 H3BQV1 296 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 GRK4P32298 578 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 INF2Q27J81 1249 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 COL13A1Q5TAT6 717 aaPredicted RBP20.46■□□□□ 0.87
CLK2-202ENST00000361168 IFFO2Q5TF58 517 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 FOXD4L5Q5VV16 416 aaPredicted RBP20.46■□□□□ 0.87
CLK2-202ENST00000361168 MCTP1Q6DN14 999 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 TRPV1Q8NER1 839 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 TBCKQ8TEA7 893 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 CRYGNQ8WXF5 182 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 FOXD4L4Q8WXT5 416 aaPredicted RBP20.46■□□□□ 0.87
CLK2-202ENST00000361168 KATNBL1Q9H079 304 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 PDGFCQ9NRA1 345 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.46■□□□□ 0.87
CLK2-202ENST00000361168 SLC5A4Q9NY91 659 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 FRMPD4Q14CM0 1322 aa20.46■□□□□ 0.87
CLK2-202ENST00000361168 CACNB2Q08289 660 aaPredicted RBP20.45■□□□□ 0.86
CLK2-202ENST00000361168 OLFML2BQ68BL8 750 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 GALNT17Q6IS24 598 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 ZNF467Q7Z7K2 595 aaPredicted RBP20.45■□□□□ 0.86
CLK2-202ENST00000361168 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 SAMD3Q8N6K7 520 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 UIMC1Q96RL1 719 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 KIF3AQ9Y496 699 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 AP3B2Q13367 1082 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 PXYLP1Q8TE99 480 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 GLT8D2Q9H1C3 349 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 MTMR6Q9Y217 621 aa20.45■□□□□ 0.86
CLK2-202ENST00000361168 ADCY6O43306 1168 aa20.44■□□□□ 0.86
CLK2-202ENST00000361168 INHAP05111 366 aa20.44■□□□□ 0.86
CLK2-202ENST00000361168 SREBF1P36956 1147 aa20.44■□□□□ 0.86
CLK2-202ENST00000361168 PRMT2P55345 433 aa20.44■□□□□ 0.86
CLK2-202ENST00000361168 ARHGAP4P98171 946 aa20.44■□□□□ 0.86
CLK2-202ENST00000361168 MORC4Q8TE76 937 aa20.44■□□□□ 0.86
CLK2-202ENST00000361168 MCOLN1Q9GZU1 580 aa20.44■□□□□ 0.86
CLK2-202ENST00000361168 MAF1Q9H063 256 aa20.44■□□□□ 0.86
CLK2-202ENST00000361168 FAM86B1E9PN63 330 aa20.43■□□□□ 0.86
CLK2-202ENST00000361168 STX6O43752 255 aa20.43■□□□□ 0.86
CLK2-202ENST00000361168 FOSP01100 380 aaPredicted RBP20.43■□□□□ 0.86
CLK2-202ENST00000361168 FAM86B2P0C5J1 330 aa20.43■□□□□ 0.86
CLK2-202ENST00000361168 PRKAR2AP13861 404 aaKnown RBP20.43■□□□□ 0.86
CLK2-202ENST00000361168 ITGB5P18084 799 aa20.43■□□□□ 0.86
CLK2-202ENST00000361168 CCND3P30281 292 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms