RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Stk38Q91VJ4 465 aa22.57■■□□□ 1.2
Lig3-209ENSMUST00000173009 Ccer1Q9CQL2 403 aa22.57■■□□□ 1.2
Lig3-209ENSMUST00000173009 Pabpc6Q9D4E6 643 aaKnown RBP22.57■■□□□ 1.2
Lig3-209ENSMUST00000173009 Cntnap5cQ0V8T7 1305 aa22.57■■□□□ 1.2
Lig3-209ENSMUST00000173009 Nkx1-1G3UXB3 402 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Pgk2P09041 417 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 ArP19091 899 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Cdh15P33146 784 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Tdo2P48776 406 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Plekha7Q3UIL6 1118 aaKnown RBP22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Usp28Q5I043 1051 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Tas2r124Q7M718 309 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Moxd2Q7TT41 619 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 GlyctkQ8QZY2 523 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Zcchc18Q8VD24 393 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Spint1Q9R097 507 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Lypla2Q9WTL7 231 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Krt85Q9Z2T6 507 aa22.56■■□□□ 1.2
Lig3-209ENSMUST00000173009 Stra6O70491 670 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Cdc25aP48964 514 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Kcna2P63141 499 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 KhsrpQ3U0V1 748 aaKnown RBP22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 C87499Q3UX49 493 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Ece1Q4PZA2 769 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Meis1Q60954 390 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Ccdc189Q6NZQ0 333 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Nap1l4Q78ZA7 375 aaKnown RBP22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Tdp1Q8BJ37 609 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 CnstQ8CBC4 711 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Lrrc56Q8K375 552 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Hexim1Q8R409 356 aaKnown RBP22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Hoxc6P10629 235 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Cd22P35329 862 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Rasip1Q3U0S6 961 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Kcnj11Q61743 390 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Fstl1Q62356 306 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Cdc14aQ6GQT0 603 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 PicalmQ7M6Y3 660 aaKnown RBP22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Bbs9Q811G0 885 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Gga3Q8BMI3 718 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 PdgfcQ8CI19 345 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Dnajc19Q9CQV7 116 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Tbx20Q9ES03 445 aa22.55■■□□□ 1.2
Lig3-209ENSMUST00000173009 Sbf1Q6ZPE2 1867 aa22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Ccdc78D3Z5T1 437 aa22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Mpp3O88910 568 aa22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Sptlc2P97363 560 aaKnown RBP22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Muc1Q02496 630 aa22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Lrrc36Q3V0M2 755 aa22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Clul1Q3ZRW6 464 aa22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Cln3Q61124 438 aa22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Tmem132dQ76HP3 1097 aa22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Extl2Q9ES89 330 aa22.54■■□□□ 1.2
Lig3-209ENSMUST00000173009 Fscn2Q32M02 492 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Nt5c2Q3V1L4 560 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Coa7Q921H9 231 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Trim11Q99PQ2 467 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Yeats4Q9CR11 227 aaKnown RBP22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Adgrf4Q9D2L6 698 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Col4a3bpQ9EQG9 624 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Astn1Q61137 1302 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Pramel3A2AHA7 463 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Gm7903A2AWL1 463 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 AV320801A2AWL3 467 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Cpb1B2RS76 415 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Gm21969J3QJZ1 289 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Gm15023L7MUB4 467 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Hoxd10P28359 340 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Taf1bP97358 586 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Zfp957Q3UT76 567 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Nlrp2Q4PLS0 1046 aaKnown RBP22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Podnl1Q6P3Y9 559 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Cdkn2aipQ8BI72 563 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Kcnh7Q9ER47 1195 aa22.53■■□□□ 1.2
Lig3-209ENSMUST00000173009 Gm5737A0A140LI11 423 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Pcdha4O88689 947 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Nr5a1P33242 462 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Grin1P35438 938 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Psg29Q3URN6 468 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Lrrfip1Q3UZ39 729 aaKnown RBP22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Kiaa1211Q5PR69 1207 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Tfe3Q64092 572 aaKnown RBP22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Gpd2Q64521 727 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Nim1kQ8BHI9 436 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 CrygnQ8VHL5 183 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Vav3Q9R0C8 847 aa22.52■■□□□ 1.2
Lig3-209ENSMUST00000173009 Gm38392E9Q2A2 434 aa22.51■■□□□ 1.19
Lig3-209ENSMUST00000173009 Cntnap5bQ0V8T8 1292 aa22.51■■□□□ 1.19
Lig3-209ENSMUST00000173009 Cnnm4Q69ZF7 771 aa22.51■■□□□ 1.19
Lig3-209ENSMUST00000173009 Amer2Q8CCJ4 672 aa22.51■■□□□ 1.19
Lig3-209ENSMUST00000173009 Nxf1Q99JX7 618 aaKnown RBP22.51■■□□□ 1.19
Lig3-209ENSMUST00000173009 Iqca1Q9CUL5 857 aa22.51■■□□□ 1.19
Lig3-209ENSMUST00000173009 Igbp1bQ9QZ29 343 aa22.51■■□□□ 1.19
Lig3-209ENSMUST00000173009 Hic1Q9R1Y5 733 aa22.51■■□□□ 1.19
Lig3-209ENSMUST00000173009 Gm10436L7N1Y3 520 aa22.5■■□□□ 1.19
Lig3-209ENSMUST00000173009 Atp9aO70228 1047 aa22.5■■□□□ 1.19
Lig3-209ENSMUST00000173009 Gadd45bP22339 160 aa22.5■■□□□ 1.19
Lig3-209ENSMUST00000173009 YdjcQ14BV6 310 aa22.5■■□□□ 1.19
Lig3-209ENSMUST00000173009 4933427I04RikQ3V053 235 aa22.5■■□□□ 1.19
Lig3-209ENSMUST00000173009 Nipa1Q8BHK1 323 aa22.5■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms