Protein–RNA interactions for Protein: Q8K375

Lrrc56, Leucine-rich repeat-containing protein 56, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc56Q8K375 Gm25239-201ENSMUST00000174915 86 ntBASIC44.16■■■■■ 4.66
Lrrc56Q8K375 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.94■■■■■ 4.14
Lrrc56Q8K375 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.05
Lrrc56Q8K375 Gm24109-201ENSMUST00000175489 103 ntBASIC38.4■■■■□ 3.74
Lrrc56Q8K375 Gm15042-201ENSMUST00000120212 883 ntBASIC38.36■■■■□ 3.73
Lrrc56Q8K375 Gm15045-201ENSMUST00000117359 883 ntBASIC37.51■■■■□ 3.6
Lrrc56Q8K375 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.31■■■■□ 3.56
Lrrc56Q8K375 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
Lrrc56Q8K375 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
Lrrc56Q8K375 Gm23366-201ENSMUST00000175022 89 ntBASIC36.83■■■■□ 3.49
Lrrc56Q8K375 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Lrrc56Q8K375 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Lrrc56Q8K375 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Lrrc56Q8K375 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.86■■■■□ 3.33
Lrrc56Q8K375 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Lrrc56Q8K375 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.58■■■■□ 3.29
Lrrc56Q8K375 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.48■■■■□ 3.27
Lrrc56Q8K375 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
Lrrc56Q8K375 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
Lrrc56Q8K375 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Lrrc56Q8K375 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
Lrrc56Q8K375 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Lrrc56Q8K375 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Lrrc56Q8K375 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Lrrc56Q8K375 Gm25238-201ENSMUST00000174914 89 ntBASIC34.95■■■■□ 3.19
Lrrc56Q8K375 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.93■■■■□ 3.18
Lrrc56Q8K375 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.92■■■■□ 3.18
Lrrc56Q8K375 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Lrrc56Q8K375 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Lrrc56Q8K375 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Lrrc56Q8K375 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
Lrrc56Q8K375 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.52■■■■□ 3.12
Lrrc56Q8K375 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.32■■■■□ 3.08
Lrrc56Q8K375 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.25■■■■□ 3.07
Lrrc56Q8K375 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Lrrc56Q8K375 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
Lrrc56Q8K375 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.03
Lrrc56Q8K375 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.92■■■■□ 3.02
Lrrc56Q8K375 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.9■■■■□ 3.02
Lrrc56Q8K375 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Lrrc56Q8K375 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.82■■■■□ 3
Lrrc56Q8K375 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
Lrrc56Q8K375 Gm27325-201ENSMUST00000175467 74 ntBASIC33.6■■■□□ 2.97
Lrrc56Q8K375 Gm25262-201ENSMUST00000174934 133 ntBASIC33.55■■■□□ 2.96
Lrrc56Q8K375 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.55■■■□□ 2.96
Lrrc56Q8K375 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.52■■■□□ 2.96
Lrrc56Q8K375 Psd-208ENSMUST00000224556 2034 ntBASIC33.48■■■□□ 2.95
Lrrc56Q8K375 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.93
Lrrc56Q8K375 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Lrrc56Q8K375 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Lrrc56Q8K375 Rab21-202ENSMUST00000218831 843 ntBASIC33.12■■■□□ 2.89
Lrrc56Q8K375 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.08■■■□□ 2.89
Lrrc56Q8K375 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.04■■■□□ 2.88
Lrrc56Q8K375 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Lrrc56Q8K375 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.86
Lrrc56Q8K375 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.93■■■□□ 2.86
Lrrc56Q8K375 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.92■■■□□ 2.86
Lrrc56Q8K375 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.92■■■□□ 2.86
Lrrc56Q8K375 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Lrrc56Q8K375 Gm26115-201ENSMUST00000175605 87 ntBASIC32.8■■■□□ 2.84
Lrrc56Q8K375 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Lrrc56Q8K375 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
Lrrc56Q8K375 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Lrrc56Q8K375 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.71■■■□□ 2.83
Lrrc56Q8K375 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.71■■■□□ 2.83
Lrrc56Q8K375 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Lrrc56Q8K375 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Lrrc56Q8K375 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Lrrc56Q8K375 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Lrrc56Q8K375 Gm8109-201ENSMUST00000194076 746 ntBASIC32.6■■■□□ 2.81
Lrrc56Q8K375 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Lrrc56Q8K375 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.53■■■□□ 2.8
Lrrc56Q8K375 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.51■■■□□ 2.79
Lrrc56Q8K375 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.5■■■□□ 2.79
Lrrc56Q8K375 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Lrrc56Q8K375 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Lrrc56Q8K375 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Lrrc56Q8K375 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.36■■■□□ 2.77
Lrrc56Q8K375 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Lrrc56Q8K375 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Lrrc56Q8K375 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Lrrc56Q8K375 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Lrrc56Q8K375 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Lrrc56Q8K375 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Lrrc56Q8K375 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Lrrc56Q8K375 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Lrrc56Q8K375 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.13■■■□□ 2.73
Lrrc56Q8K375 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Lrrc56Q8K375 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.99■■■□□ 2.71
Lrrc56Q8K375 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Lrrc56Q8K375 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Lrrc56Q8K375 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.94■■■□□ 2.7
Lrrc56Q8K375 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.9■■■□□ 2.7
Lrrc56Q8K375 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
Lrrc56Q8K375 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Lrrc56Q8K375 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Lrrc56Q8K375 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Lrrc56Q8K375 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Lrrc56Q8K375 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Lrrc56Q8K375 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms