Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Gm25239-201ENSMUST00000174915 86 ntBASIC43.93■■■■■ 4.62
PdgfcQ8CI19 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.73■■■■■ 4.11
PdgfcQ8CI19 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
PdgfcQ8CI19 Gm24109-201ENSMUST00000175489 103 ntBASIC38.18■■■■□ 3.7
PdgfcQ8CI19 Gm15042-201ENSMUST00000120212 883 ntBASIC38.14■■■■□ 3.7
PdgfcQ8CI19 Gm15045-201ENSMUST00000117359 883 ntBASIC37.31■■■■□ 3.56
PdgfcQ8CI19 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.08■■■■□ 3.53
PdgfcQ8CI19 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
PdgfcQ8CI19 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
PdgfcQ8CI19 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
PdgfcQ8CI19 Gm23366-201ENSMUST00000175022 89 ntBASIC36.59■■■■□ 3.45
PdgfcQ8CI19 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
PdgfcQ8CI19 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
PdgfcQ8CI19 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.71■■■■□ 3.31
PdgfcQ8CI19 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
PdgfcQ8CI19 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.49■■■■□ 3.27
PdgfcQ8CI19 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.45■■■■□ 3.27
PdgfcQ8CI19 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.29■■■■□ 3.24
PdgfcQ8CI19 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.25■■■■□ 3.23
PdgfcQ8CI19 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
PdgfcQ8CI19 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
PdgfcQ8CI19 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
PdgfcQ8CI19 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
PdgfcQ8CI19 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.87■■■■□ 3.17
PdgfcQ8CI19 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PdgfcQ8CI19 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
PdgfcQ8CI19 Gm25238-201ENSMUST00000174914 89 ntBASIC34.78■■■■□ 3.16
PdgfcQ8CI19 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
PdgfcQ8CI19 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.67■■■■□ 3.14
PdgfcQ8CI19 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
PdgfcQ8CI19 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.11
PdgfcQ8CI19 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.5■■■■□ 3.11
PdgfcQ8CI19 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.19■■■■□ 3.06
PdgfcQ8CI19 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
PdgfcQ8CI19 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
PdgfcQ8CI19 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.96■■■■□ 3.03
PdgfcQ8CI19 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.81■■■■□ 3
PdgfcQ8CI19 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
PdgfcQ8CI19 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.71■■■□□ 2.99
PdgfcQ8CI19 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
PdgfcQ8CI19 Psd-208ENSMUST00000224556 2034 ntBASIC33.64■■■□□ 2.98
PdgfcQ8CI19 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
PdgfcQ8CI19 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.53■■■□□ 2.96
PdgfcQ8CI19 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.45■■■□□ 2.95
PdgfcQ8CI19 Gm27325-201ENSMUST00000175467 74 ntBASIC33.4■■■□□ 2.94
PdgfcQ8CI19 Gm25262-201ENSMUST00000174934 133 ntBASIC33.33■■■□□ 2.93
PdgfcQ8CI19 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.31■■■□□ 2.92
PdgfcQ8CI19 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
PdgfcQ8CI19 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.17■■■□□ 2.9
PdgfcQ8CI19 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
PdgfcQ8CI19 Rab21-202ENSMUST00000218831 843 ntBASIC32.9■■■□□ 2.86
PdgfcQ8CI19 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
PdgfcQ8CI19 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.83■■■□□ 2.85
PdgfcQ8CI19 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
PdgfcQ8CI19 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.8■■■□□ 2.84
PdgfcQ8CI19 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PdgfcQ8CI19 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
PdgfcQ8CI19 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.77■■■□□ 2.84
PdgfcQ8CI19 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.77■■■□□ 2.84
PdgfcQ8CI19 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.73■■■□□ 2.83
PdgfcQ8CI19 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.71■■■□□ 2.83
PdgfcQ8CI19 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
PdgfcQ8CI19 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
PdgfcQ8CI19 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
PdgfcQ8CI19 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.58■■■□□ 2.81
PdgfcQ8CI19 Gm26115-201ENSMUST00000175605 87 ntBASIC32.58■■■□□ 2.81
PdgfcQ8CI19 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PdgfcQ8CI19 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
PdgfcQ8CI19 Gm8109-201ENSMUST00000194076 746 ntBASIC32.44■■■□□ 2.78
PdgfcQ8CI19 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PdgfcQ8CI19 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PdgfcQ8CI19 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
PdgfcQ8CI19 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.38■■■□□ 2.77
PdgfcQ8CI19 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.36■■■□□ 2.77
PdgfcQ8CI19 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.34■■■□□ 2.77
PdgfcQ8CI19 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PdgfcQ8CI19 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PdgfcQ8CI19 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
PdgfcQ8CI19 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
PdgfcQ8CI19 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PdgfcQ8CI19 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
PdgfcQ8CI19 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.14■■■□□ 2.74
PdgfcQ8CI19 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
PdgfcQ8CI19 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
PdgfcQ8CI19 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
PdgfcQ8CI19 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PdgfcQ8CI19 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.98■■■□□ 2.71
PdgfcQ8CI19 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PdgfcQ8CI19 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PdgfcQ8CI19 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PdgfcQ8CI19 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PdgfcQ8CI19 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PdgfcQ8CI19 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PdgfcQ8CI19 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.78■■■□□ 2.68
PdgfcQ8CI19 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.78■■■□□ 2.68
PdgfcQ8CI19 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PdgfcQ8CI19 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.77■■■□□ 2.68
PdgfcQ8CI19 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
PdgfcQ8CI19 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.67■■■□□ 2.66
PdgfcQ8CI19 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms