RNA–Protein interactions for RNA: YLR133W

CKI1, Transcript of Choline kinase, yeastyeast

Gene CKI1, Length 1,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKI1YLR133W ENT1Q12518 454 aa10.03□□□□□ -0.8
CKI1YLR133W GLN1P32288 370 aaKnown RBP10.01□□□□□ -0.81
CKI1YLR133W SPE2P21182 396 aa10□□□□□ -0.81
CKI1YLR133W PPH3P32345 308 aa10□□□□□ -0.81
CKI1YLR133W KIP3P53086 805 aaKnown RBP10□□□□□ -0.81
CKI1YLR133W ENV9Q08651 330 aa9.99□□□□□ -0.81
CKI1YLR133W PRP45P28004 379 aaPredicted RBP9.97□□□□□ -0.81
CKI1YLR133W SIS2P36024 562 aa9.96□□□□□ -0.81
CKI1YLR133W PSK1P31374 1356 aa9.94□□□□□ -0.82
CKI1YLR133W RRP5Q05022 1729 aaKnown RBP9.94□□□□□ -0.82
CKI1YLR133W PRP5P21372 849 aaPredicted RBP9.92□□□□□ -0.82
CKI1YLR133W EBP2P36049 427 aaKnown RBP9.92□□□□□ -0.82
CKI1YLR133W CHZ1P40019 153 aaPredicted RBP9.92□□□□□ -0.82
CKI1YLR133W ORC1P54784 914 aaPredicted RBP9.92□□□□□ -0.82
CKI1YLR133W IMH1Q06704 911 aaKnown RBP9.92□□□□□ -0.82
CKI1YLR133W ADE6P38972 1358 aaKnown RBP9.92□□□□□ -0.82
CKI1YLR133W YMR074CQ04773 145 aa9.9□□□□□ -0.83
CKI1YLR133W YLR419WQ06698 1435 aaKnown RBP9.89□□□□□ -0.83
CKI1YLR133W CAB3P36076 571 aa9.89□□□□□ -0.83
CKI1YLR133W SPT7P35177 1332 aa9.89□□□□□ -0.83
CKI1YLR133W TY4B-HP0C2J7 1802 aa9.88□□□□□ -0.83
CKI1YLR133W TY4B-JP47024 1803 aa9.88□□□□□ -0.83
CKI1YLR133W LEU2P04173 364 aaPredicted RBP9.87□□□□□ -0.83
CKI1YLR133W SCT1P32784 759 aa9.87□□□□□ -0.83
CKI1YLR133W PRP43P53131 767 aaKnown RBP9.86□□□□□ -0.83
CKI1YLR133W ENP1P38333 483 aaKnown RBP9.85□□□□□ -0.83
CKI1YLR133W MTR4P47047 1073 aaKnown RBP9.85□□□□□ -0.83
CKI1YLR133W MSB3P48566 633 aaPredicted RBP9.85□□□□□ -0.83
CKI1YLR133W YRF1-2P40105 1681 aa9.85□□□□□ -0.83
CKI1YLR133W NOP2P40991 618 aaKnown RBP9.85□□□□□ -0.83
CKI1YLR133W SEC3P33332 1336 aaKnown RBP9.83□□□□□ -0.84
CKI1YLR133W CSE4P36012 229 aa9.82□□□□□ -0.84
CKI1YLR133W RPS24AP0CX31 135 aaKnown RBP9.81□□□□□ -0.84
CKI1YLR133W RPS24BP0CX32 135 aaKnown RBP9.81□□□□□ -0.84
CKI1YLR133W SLM3Q12093 417 aa9.8□□□□□ -0.84
CKI1YLR133W TCB1Q12466 1186 aa9.8□□□□□ -0.84
CKI1YLR133W LEU3P08638 886 aa9.79□□□□□ -0.84
CKI1YLR133W PRI1P10363 409 aa9.79□□□□□ -0.84
CKI1YLR133W YML133CQ03099 1374 aa9.79□□□□□ -0.84
CKI1YLR133W YLL067CQ07888 1374 aa9.79□□□□□ -0.84
CKI1YLR133W YLL066CQ99208 1374 aa9.79□□□□□ -0.84
CKI1YLR133W IES2P40154 320 aa9.79□□□□□ -0.84
CKI1YLR133W FKH1P40466 484 aa9.77□□□□□ -0.85
CKI1YLR133W YRB30P53107 440 aaPredicted RBP9.77□□□□□ -0.85
CKI1YLR133W RSF2P46974 1380 aa9.76□□□□□ -0.85
CKI1YLR133W BUD31P25337 157 aaPredicted RBP9.76□□□□□ -0.85
CKI1YLR133W DOT5P40553 215 aa9.75□□□□□ -0.85
CKI1YLR133W URB1P34241 1764 aaKnown RBP9.74□□□□□ -0.85
CKI1YLR133W MHP1P43638 1398 aa9.73□□□□□ -0.85
CKI1YLR133W RPN11P43588 306 aaKnown RBP9.72□□□□□ -0.85
CKI1YLR133W ROM2P51862 1356 aaKnown RBP9.72□□□□□ -0.85
CKI1YLR133W RTG3P38165 486 aa9.71□□□□□ -0.85
CKI1YLR133W PSD2P53037 1138 aaKnown RBP9.71□□□□□ -0.85
CKI1YLR133W XKS1P42826 600 aa9.7□□□□□ -0.86
CKI1YLR133W MLP1Q02455 1875 aaKnown RBP9.7□□□□□ -0.86
CKI1YLR133W YEF3P16521 1044 aaKnown RBP9.7□□□□□ -0.86
CKI1YLR133W FOX2Q02207 900 aaKnown RBP9.7□□□□□ -0.86
CKI1YLR133W YRF1-3P0CX14 1859 aa9.7□□□□□ -0.86
CKI1YLR133W YRF1-7P0CX15 1859 aa9.7□□□□□ -0.86
CKI1YLR133W YRF1-6P53819 1859 aa9.7□□□□□ -0.86
CKI1YLR133W PDI1P17967 522 aaKnown RBP9.69□□□□□ -0.86
CKI1YLR133W UBP1P25037 809 aa9.69□□□□□ -0.86
CKI1YLR133W RTF1P53064 558 aa9.69□□□□□ -0.86
CKI1YLR133W YKL133CP36066 463 aa9.68□□□□□ -0.86
CKI1YLR133W GAS4Q08271 471 aa9.68□□□□□ -0.86
CKI1YLR133W YIL177CP40434 1758 aa9.68□□□□□ -0.86
CKI1YLR133W YJL225CP40889 1758 aa9.68□□□□□ -0.86
CKI1YLR133W DPS1P04802 557 aaKnown RBP9.68□□□□□ -0.86
CKI1YLR133W YFR016CP43597 1233 aaKnown RBP9.68□□□□□ -0.86
CKI1YLR133W FKS3Q04952 1785 aa9.66□□□□□ -0.86
CKI1YLR133W PDS5Q04264 1277 aa9.66□□□□□ -0.86
CKI1YLR133W TAP42Q04372 366 aa9.66□□□□□ -0.86
CKI1YLR133W EDE1P34216 1381 aa9.65□□□□□ -0.86
CKI1YLR133W APC1P53886 1748 aa9.64□□□□□ -0.87
CKI1YLR133W GRX4P32642 244 aa9.64□□□□□ -0.87
CKI1YLR133W YJL181WP46987 611 aa9.64□□□□□ -0.87
CKI1YLR133W NPR2P39923 615 aa9.63□□□□□ -0.87
CKI1YLR133W LAM6Q08001 693 aa9.63□□□□□ -0.87
CKI1YLR133W COBP00163 385 aa9.62□□□□□ -0.87
CKI1YLR133W PRS1P32895 427 aaKnown RBP9.62□□□□□ -0.87
CKI1YLR133W AUS1Q08409 1394 aa9.62□□□□□ -0.87
CKI1YLR133W YKR075CP36155 307 aa9.61□□□□□ -0.87
CKI1YLR133W RCR1P38212 213 aa9.61□□□□□ -0.87
CKI1YLR133W LYS4P49367 693 aaPredicted RBP9.61□□□□□ -0.87
CKI1YLR133W HIM1Q06674 414 aa9.61□□□□□ -0.87
CKI1YLR133W PRP40P33203 583 aaKnown RBP9.6□□□□□ -0.87
CKI1YLR133W YBL086CP38177 466 aa9.6□□□□□ -0.87
CKI1YLR133W GTT3P39996 337 aa9.6□□□□□ -0.87
CKI1YLR133W MEC3Q02574 474 aa9.6□□□□□ -0.87
CKI1YLR133W YRF1-4O13559 1382 aa9.59□□□□□ -0.87
CKI1YLR133W SIR4P11978 1358 aa9.58□□□□□ -0.88
CKI1YLR133W RPS0BP46654 252 aaKnown RBP9.58□□□□□ -0.88
CKI1YLR133W UGA2P38067 497 aa9.57□□□□□ -0.88
CKI1YLR133W NST1P53935 1240 aa9.57□□□□□ -0.88
CKI1YLR133W ADE16P54113 591 aaKnown RBP9.56□□□□□ -0.88
CKI1YLR133W FRK1Q03002 865 aaPredicted RBP9.56□□□□□ -0.88
CKI1YLR133W ALD2P47771 506 aa9.56□□□□□ -0.88
CKI1YLR133W AIM44Q99299 758 aa9.56□□□□□ -0.88
CKI1YLR133W KAR2P16474 682 aaKnown RBP9.54□□□□□ -0.88
CKI1YLR133W SNF2P22082 1703 aa9.54□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms