RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W SSF2Q12153 453 aaPredicted RBP6.81□□□□□ -1.32
FOB1YDR110W CIT2P08679 460 aa6.8□□□□□ -1.32
FOB1YDR110W NOC2P39744 710 aaKnown RBP6.8□□□□□ -1.32
FOB1YDR110W OYE2Q03558 400 aaKnown RBP6.8□□□□□ -1.32
FOB1YDR110W TIF1P10081 395 aaKnown RBP6.79□□□□□ -1.32
FOB1YDR110W GRX4P32642 244 aa6.79□□□□□ -1.32
FOB1YDR110W NFU1P32860 256 aa6.79□□□□□ -1.32
FOB1YDR110W MAG2Q06436 670 aaKnown RBP6.79□□□□□ -1.32
FOB1YDR110W MAK16P10962 306 aaPredicted RBP6.79□□□□□ -1.32
FOB1YDR110W ATE1P16639 503 aa6.79□□□□□ -1.32
FOB1YDR110W SVL3Q03088 825 aaKnown RBP6.79□□□□□ -1.32
FOB1YDR110W COG4Q06096 861 aa6.79□□□□□ -1.32
FOB1YDR110W HIR3P47171 1648 aa6.78□□□□□ -1.32
FOB1YDR110W SEC20P28791 383 aa6.78□□□□□ -1.32
FOB1YDR110W STM1P39015 273 aaKnown RBP6.78□□□□□ -1.32
FOB1YDR110W HOS4P40480 1083 aa6.78□□□□□ -1.32
FOB1YDR110W RSM7P47150 247 aa6.78□□□□□ -1.32
FOB1YDR110W ATF2P53296 535 aa6.78□□□□□ -1.32
FOB1YDR110W NOP53Q12080 455 aaKnown RBP6.78□□□□□ -1.32
FOB1YDR110W KAR1P11927 433 aa6.77□□□□□ -1.33
FOB1YDR110W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
FOB1YDR110W PSD2P53037 1138 aaKnown RBP6.76□□□□□ -1.33
FOB1YDR110W NSE3Q05541 303 aa6.76□□□□□ -1.33
FOB1YDR110W ERP4Q12450 207 aa6.76□□□□□ -1.33
FOB1YDR110W MFT1P33441 392 aaKnown RBP6.76□□□□□ -1.33
FOB1YDR110W IOC3P43596 787 aa6.76□□□□□ -1.33
FOB1YDR110W ENT2Q05785 613 aa6.75□□□□□ -1.33
FOB1YDR110W PRI1P10363 409 aa6.74□□□□□ -1.33
FOB1YDR110W PWP2P25635 923 aaKnown RBP6.74□□□□□ -1.33
FOB1YDR110W NOP2P40991 618 aaKnown RBP6.74□□□□□ -1.33
FOB1YDR110W YPR204WQ08995 1032 aa6.74□□□□□ -1.33
FOB1YDR110W SNU66Q12420 587 aaPredicted RBP6.74□□□□□ -1.33
FOB1YDR110W NKP1Q12493 238 aa6.74□□□□□ -1.33
FOB1YDR110W FUI1P38196 639 aa6.73□□□□□ -1.33
FOB1YDR110W SVF1Q05515 481 aa6.73□□□□□ -1.33
FOB1YDR110W OPI1P21957 404 aa6.73□□□□□ -1.33
FOB1YDR110W PUP1P25043 261 aa6.73□□□□□ -1.33
FOB1YDR110W SEC6P32844 805 aa6.73□□□□□ -1.33
FOB1YDR110W SRP40P32583 406 aaPredicted RBP6.72□□□□□ -1.33
FOB1YDR110W BLI1P35727 113 aa6.72□□□□□ -1.33
FOB1YDR110W ENP1P38333 483 aaKnown RBP6.72□□□□□ -1.33
FOB1YDR110W RPL34BP40525 121 aaKnown RBP6.72□□□□□ -1.33
FOB1YDR110W IES1P43579 692 aa6.72□□□□□ -1.33
FOB1YDR110W JIP5Q06214 492 aaPredicted RBP6.72□□□□□ -1.33
FOB1YDR110W ECM5Q03214 1411 aa6.71□□□□□ -1.33
FOB1YDR110W MAL31P38156 614 aa6.71□□□□□ -1.34
FOB1YDR110W NMD3P38861 518 aaKnown RBP6.71□□□□□ -1.34
FOB1YDR110W POL32P47110 350 aa6.71□□□□□ -1.34
FOB1YDR110W ESF2P53743 316 aaKnown RBP6.71□□□□□ -1.34
FOB1YDR110W GRX3Q03835 250 aa6.71□□□□□ -1.34
FOB1YDR110W TRX2P22803 104 aaKnown RBP6.7□□□□□ -1.34
FOB1YDR110W YKL091CP33324 310 aaKnown RBP6.7□□□□□ -1.34
FOB1YDR110W POB3Q04636 552 aaKnown RBP6.7□□□□□ -1.34
FOB1YDR110W VAC8P39968 578 aa6.7□□□□□ -1.34
FOB1YDR110W FAF1P40546 346 aaPredicted RBP6.7□□□□□ -1.34
FOB1YDR110W MSC6Q08818 692 aaKnown RBP6.7□□□□□ -1.34
FOB1YDR110W GLO3P38682 493 aaKnown RBP6.69□□□□□ -1.34
FOB1YDR110W PPX1P38698 397 aa6.69□□□□□ -1.34
FOB1YDR110W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
FOB1YDR110W STB3Q12427 513 aa6.69□□□□□ -1.34
FOB1YDR110W YBL113CQ7M4S9 792 aa6.69□□□□□ -1.34
FOB1YDR110W THS1P04801 734 aaKnown RBP6.68□□□□□ -1.34
FOB1YDR110W SEC8P32855 1065 aa6.68□□□□□ -1.34
FOB1YDR110W VPS24P36095 224 aaKnown RBP6.68□□□□□ -1.34
FOB1YDR110W GRX7P38068 203 aa6.68□□□□□ -1.34
FOB1YDR110W RTG2P32608 588 aaKnown RBP6.67□□□□□ -1.34
FOB1YDR110W RCR1P38212 213 aa6.67□□□□□ -1.34
FOB1YDR110W YJR142WP47173 342 aa6.67□□□□□ -1.34
FOB1YDR110W ALD3P54114 506 aa6.67□□□□□ -1.34
FOB1YDR110W CEF1Q03654 590 aaPredicted RBP6.67□□□□□ -1.34
FOB1YDR110W XRN1P22147 1528 aaKnown RBP6.67□□□□□ -1.34
FOB1YDR110W RPN12P32496 274 aa6.67□□□□□ -1.34
FOB1YDR110W ERP5P38819 212 aa6.67□□□□□ -1.34
FOB1YDR110W SSN2P38931 1420 aa6.67□□□□□ -1.34
FOB1YDR110W BUD4P47136 1447 aa6.67□□□□□ -1.34
FOB1YDR110W THO2P53552 1597 aaKnown RBP6.67□□□□□ -1.34
FOB1YDR110W TY4B-PA0A0B7P3V8 1104 aa6.66□□□□□ -1.34
FOB1YDR110W TY1B-AO13527 1196 aaKnown RBP6.66□□□□□ -1.34
FOB1YDR110W REF2P42073 533 aaPredicted RBP6.66□□□□□ -1.34
FOB1YDR110W TY4A-HQ6Q5P6 413 aa6.66□□□□□ -1.34
FOB1YDR110W VMA1P17255 1071 aaKnown RBP6.65□□□□□ -1.34
FOB1YDR110W UBP12P39538 1254 aa6.65□□□□□ -1.34
FOB1YDR110W BUD6P41697 788 aa6.65□□□□□ -1.34
FOB1YDR110W CSN12P47130 423 aa6.65□□□□□ -1.34
FOB1YDR110W GDE1Q02979 1223 aa6.65□□□□□ -1.34
FOB1YDR110W PKH1Q03407 766 aa6.65□□□□□ -1.34
FOB1YDR110W WHI5Q12416 295 aa6.65□□□□□ -1.34
FOB1YDR110W RTT106P40161 455 aa6.64□□□□□ -1.35
FOB1YDR110W MDM1Q01846 1127 aa6.64□□□□□ -1.35
FOB1YDR110W QCR6P00127 147 aa6.64□□□□□ -1.35
FOB1YDR110W MUM2P38236 366 aa6.64□□□□□ -1.35
FOB1YDR110W PES4P39684 611 aa6.64□□□□□ -1.35
FOB1YDR110W ATG1P53104 897 aa6.64□□□□□ -1.35
FOB1YDR110W RPN4Q03465 531 aa6.64□□□□□ -1.35
FOB1YDR110W VPS5Q92331 675 aa6.63□□□□□ -1.35
FOB1YDR110W MNN1P39106 762 aa6.62□□□□□ -1.35
FOB1YDR110W YEN1P40028 759 aa6.62□□□□□ -1.35
FOB1YDR110W BDP1P46678 594 aa6.62□□□□□ -1.35
FOB1YDR110W ITC1P53125 1264 aa6.62□□□□□ -1.35
FOB1YDR110W FAP1P53971 965 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms