RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C TY2B-LR1P0C2J3 1770 aa2.71□□□□□ -1.97
MSH6YDR097C TY2B-FP0CX63 1770 aa2.71□□□□□ -1.97
MSH6YDR097C TY2B-GR2P0CX64 1770 aa2.71□□□□□ -1.97
MSH6YDR097C TY2B-CP25384 1770 aa2.71□□□□□ -1.97
MSH6YDR097C TY2B-DR2Q03494 1770 aa2.71□□□□□ -1.97
MSH6YDR097C TY1B-DR1Q03855 1755 aa2.71□□□□□ -1.97
MSH6YDR097C TY2B-DR3Q07791 1770 aaKnown RBP2.71□□□□□ -1.97
MSH6YDR097C TY2B-OR1Q12113 1770 aa2.71□□□□□ -1.97
MSH6YDR097C TY2B-DR1Q12472 1770 aa2.71□□□□□ -1.97
MSH6YDR097C TY2B-OR2Q12501 1770 aa2.71□□□□□ -1.97
MSH6YDR097C NUP42P49686 430 aaKnown RBP2.71□□□□□ -1.98
MSH6YDR097C SSA4P22202 642 aaKnown RBP2.71□□□□□ -1.98
MSH6YDR097C SCJ1P25303 377 aa2.71□□□□□ -1.98
MSH6YDR097C STS1P38637 319 aa2.71□□□□□ -1.98
MSH6YDR097C PKH3Q03306 898 aaPredicted RBP2.71□□□□□ -1.98
MSH6YDR097C YML083CQ04526 418 aa2.71□□□□□ -1.98
MSH6YDR097C SNF2P22082 1703 aa2.7□□□□□ -1.98
MSH6YDR097C VPS29P38759 282 aa2.7□□□□□ -1.98
MSH6YDR097C TGL3P40308 642 aa2.7□□□□□ -1.98
MSH6YDR097C ATH1P48016 1211 aa2.7□□□□□ -1.98
MSH6YDR097C IOC4Q04213 475 aa2.7□□□□□ -1.98
MSH6YDR097C NST1P53935 1240 aa2.7□□□□□ -1.98
MSH6YDR097C TIF1P10081 395 aaKnown RBP2.69□□□□□ -1.98
MSH6YDR097C ARG8P18544 423 aa2.69□□□□□ -1.98
MSH6YDR097C UBP14P38237 781 aaKnown RBP2.69□□□□□ -1.98
MSH6YDR097C ESS1P22696 170 aa2.69□□□□□ -1.98
MSH6YDR097C SLD2P34252 453 aa2.69□□□□□ -1.98
MSH6YDR097C SPP1Q03012 353 aa2.69□□□□□ -1.98
MSH6YDR097C YOR238WQ08634 303 aa2.69□□□□□ -1.98
MSH6YDR097C YJL171CP46992 396 aa2.68□□□□□ -1.98
MSH6YDR097C PTC3P34221 468 aaKnown RBP2.68□□□□□ -1.98
MSH6YDR097C RAD54P32863 898 aa2.68□□□□□ -1.98
MSH6YDR097C NOP8Q08287 484 aaPredicted RBP2.68□□□□□ -1.98
MSH6YDR097C TRM3Q07527 1436 aa2.67□□□□□ -1.98
MSH6YDR097C MAK21Q12176 1025 aaKnown RBP2.67□□□□□ -1.98
MSH6YDR097C SSA2P10592 639 aaKnown RBP2.67□□□□□ -1.98
MSH6YDR097C GAP1P19145 602 aaPredicted RBP2.67□□□□□ -1.98
MSH6YDR097C DCW1P36091 449 aa2.66□□□□□ -1.98
MSH6YDR097C HPC2Q01448 625 aa2.66□□□□□ -1.98
MSH6YDR097C TY1B-NL2Q99337 1749 aaKnown RBP2.66□□□□□ -1.98
MSH6YDR097C XRN1P22147 1528 aaKnown RBP2.66□□□□□ -1.98
MSH6YDR097C COX6P00427 148 aa2.66□□□□□ -1.98
MSH6YDR097C GLN1P32288 370 aaKnown RBP2.66□□□□□ -1.98
MSH6YDR097C YMR1P47147 688 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
MSH6YDR097C TEA1P47988 759 aa2.66□□□□□ -1.98
MSH6YDR097C YDR090CQ03193 310 aa2.66□□□□□ -1.98
MSH6YDR097C ITT1Q04638 464 aa2.66□□□□□ -1.98
MSH6YDR097C JIP5Q06214 492 aaPredicted RBP2.66□□□□□ -1.98
MSH6YDR097C TAF2P23255 1407 aa2.66□□□□□ -1.98
MSH6YDR097C TRM732Q03496 1420 aa2.66□□□□□ -1.98
MSH6YDR097C MST1P07236 462 aa2.66□□□□□ -1.98
MSH6YDR097C TY2B-BQ12491 1770 aa2.65□□□□□ -1.98
MSH6YDR097C YJU3P28321 313 aa2.65□□□□□ -1.98
MSH6YDR097C BIO2P32451 375 aa2.65□□□□□ -1.98
MSH6YDR097C RRN6P32786 894 aa2.65□□□□□ -1.98
MSH6YDR097C YDJ1P25491 409 aaKnown RBP2.65□□□□□ -1.99
MSH6YDR097C CDC3P32457 520 aaKnown RBP2.65□□□□□ -1.99
MSH6YDR097C ECM23Q02710 187 aa2.65□□□□□ -1.99
MSH6YDR097C GDB1Q06625 1536 aa2.64□□□□□ -1.99
MSH6YDR097C KTR1P27810 393 aaKnown RBP2.64□□□□□ -1.99
MSH6YDR097C IML1P47170 1584 aa2.64□□□□□ -1.99
MSH6YDR097C GRE2Q12068 342 aaKnown RBP2.64□□□□□ -1.99
MSH6YDR097C SNU71P53207 620 aaKnown RBP2.63□□□□□ -1.99
MSH6YDR097C ISF1P32488 338 aa2.63□□□□□ -1.99
MSH6YDR097C MRX12P47084 519 aa2.63□□□□□ -1.99
MSH6YDR097C CHD1P32657 1468 aa2.63□□□□□ -1.99
MSH6YDR097C TTI1P36097 1038 aa2.63□□□□□ -1.99
MSH6YDR097C GRS1P38088 690 aaKnown RBP2.63□□□□□ -1.99
MSH6YDR097C UBX7P38349 436 aa2.63□□□□□ -1.99
MSH6YDR097C YAP5P40574 245 aa2.63□□□□□ -1.99
MSH6YDR097C SET4P42948 560 aa2.63□□□□□ -1.99
MSH6YDR097C ORC1P54784 914 aaPredicted RBP2.63□□□□□ -1.99
MSH6YDR097C NOB1Q08444 459 aaKnown RBP2.63□□□□□ -1.99
MSH6YDR097C MMP1Q12372 583 aa2.62□□□□□ -1.99
MSH6YDR097C ENO1P00924 437 aaKnown RBP2.62□□□□□ -1.99
MSH6YDR097C PEX21P50091 288 aa2.62□□□□□ -1.99
MSH6YDR097C RAD59Q12223 238 aa2.62□□□□□ -1.99
MSH6YDR097C YPK9Q12697 1472 aa2.62□□□□□ -1.99
MSH6YDR097C IPL1P38991 367 aa2.62□□□□□ -1.99
MSH6YDR097C ENV9Q08651 330 aa2.62□□□□□ -1.99
MSH6YDR097C SAM3Q08986 587 aa2.62□□□□□ -1.99
MSH6YDR097C TY1B-JR2P47100 1755 aaKnown RBP2.61□□□□□ -1.99
MSH6YDR097C TY1B-ER2Q03619 1755 aa2.61□□□□□ -1.99
MSH6YDR097C TY1B-MR1Q04214 1755 aa2.61□□□□□ -1.99
MSH6YDR097C TY1B-MR2Q04670 1755 aaKnown RBP2.61□□□□□ -1.99
MSH6YDR097C TY1B-LR1Q12088 1755 aaKnown RBP2.61□□□□□ -1.99
MSH6YDR097C TY1B-NL1Q12112 1755 aa2.61□□□□□ -1.99
MSH6YDR097C TY1B-GR1Q12141 1755 aa2.61□□□□□ -1.99
MSH6YDR097C TY1B-BLQ12490 1755 aa2.61□□□□□ -1.99
MSH6YDR097C YPR109WQ06104 294 aa2.61□□□□□ -1.99
MSH6YDR097C YLR326WQ06170 240 aaKnown RBP2.61□□□□□ -1.99
MSH6YDR097C SLY41P22215 453 aa2.61□□□□□ -1.99
MSH6YDR097C YBL113CQ7M4S9 792 aa2.6□□□□□ -1.99
MSH6YDR097C PAN1P32521 1480 aa2.6□□□□□ -1.99
MSH6YDR097C VNX1P42839 908 aa2.6□□□□□ -1.99
MSH6YDR097C TUM1Q08686 304 aaKnown RBP2.6□□□□□ -1.99
MSH6YDR097C TY1B-DR3Q99231 1755 aa2.6□□□□□ -1.99
MSH6YDR097C PCS60P38137 543 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
MSH6YDR097C SOL3P38858 249 aa2.59□□□□□ -1.99
MSH6YDR097C ULI1P43604 169 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms