RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W FKH1P40466 484 aa7.23□□□□□ -1.25
VMS1YDR049W STM1P39015 273 aaKnown RBP7.22□□□□□ -1.25
VMS1YDR049W MAK16P10962 306 aaPredicted RBP7.21□□□□□ -1.25
VMS1YDR049W YDL121CQ07541 149 aa7.21□□□□□ -1.25
VMS1YDR049W RAD2P07276 1031 aa7.21□□□□□ -1.26
VMS1YDR049W SSB1P11484 613 aaKnown RBP7.21□□□□□ -1.26
VMS1YDR049W SSB2P40150 613 aaKnown RBP7.21□□□□□ -1.26
VMS1YDR049W TFG1P41895 735 aaPredicted RBP7.21□□□□□ -1.26
VMS1YDR049W REF2P42073 533 aaPredicted RBP7.21□□□□□ -1.26
VMS1YDR049W RPA135P22138 1203 aaKnown RBP7.2□□□□□ -1.26
VMS1YDR049W RPS0AP32905 252 aaKnown RBP7.2□□□□□ -1.26
VMS1YDR049W GIR2Q03768 265 aaPredicted RBP7.2□□□□□ -1.26
VMS1YDR049W RRP15Q06511 250 aaPredicted RBP7.2□□□□□ -1.26
VMS1YDR049W YOL057WQ08225 711 aa7.2□□□□□ -1.26
VMS1YDR049W NOP53Q12080 455 aaKnown RBP7.2□□□□□ -1.26
VMS1YDR049W SEC20P28791 383 aa7.19□□□□□ -1.26
VMS1YDR049W NOP2P40991 618 aaKnown RBP7.19□□□□□ -1.26
VMS1YDR049W ULI1P43604 169 aa7.19□□□□□ -1.26
VMS1YDR049W VMA4P22203 233 aaKnown RBP7.18□□□□□ -1.26
VMS1YDR049W BOI2P39969 1040 aa7.18□□□□□ -1.26
VMS1YDR049W YML083CQ04526 418 aa7.18□□□□□ -1.26
VMS1YDR049W YPR204WQ08995 1032 aa7.18□□□□□ -1.26
VMS1YDR049W MPE1P35728 441 aaKnown RBP7.17□□□□□ -1.26
VMS1YDR049W ERP2P39704 215 aa7.17□□□□□ -1.26
VMS1YDR049W TMA64Q04600 565 aaKnown RBP7.17□□□□□ -1.26
VMS1YDR049W LDB19Q12502 818 aa7.17□□□□□ -1.26
VMS1YDR049W BIO2P32451 375 aa7.16□□□□□ -1.26
VMS1YDR049W CSN12P47130 423 aa7.16□□□□□ -1.26
VMS1YDR049W PIB1Q06651 286 aa7.16□□□□□ -1.26
VMS1YDR049W MAK11P20484 414 aaKnown RBP7.15□□□□□ -1.26
VMS1YDR049W ALG12P53730 551 aa7.15□□□□□ -1.26
VMS1YDR049W PUP1P25043 261 aa7.15□□□□□ -1.27
VMS1YDR049W RTG2P32608 588 aaKnown RBP7.15□□□□□ -1.27
VMS1YDR049W RCR1P38212 213 aa7.15□□□□□ -1.27
VMS1YDR049W ECM16Q04217 1267 aaKnown RBP7.14□□□□□ -1.27
VMS1YDR049W MAG2Q06436 670 aaKnown RBP7.14□□□□□ -1.27
VMS1YDR049W ATE1P16639 503 aa7.13□□□□□ -1.27
VMS1YDR049W NOC2P39744 710 aaKnown RBP7.13□□□□□ -1.27
VMS1YDR049W COX6P00427 148 aa7.13□□□□□ -1.27
VMS1YDR049W CIT2P08679 460 aa7.13□□□□□ -1.27
VMS1YDR049W MRM1P25270 412 aa7.13□□□□□ -1.27
VMS1YDR049W VPS27P40343 622 aaKnown RBP7.13□□□□□ -1.27
VMS1YDR049W MPP10P47083 593 aaKnown RBP7.13□□□□□ -1.27
VMS1YDR049W POL32P47110 350 aa7.13□□□□□ -1.27
VMS1YDR049W MSC6Q08818 692 aaKnown RBP7.13□□□□□ -1.27
VMS1YDR049W IOC2Q12072 812 aa7.13□□□□□ -1.27
VMS1YDR049W BMT6Q12291 365 aa7.13□□□□□ -1.27
VMS1YDR049W SRP40P32583 406 aaPredicted RBP7.12□□□□□ -1.27
VMS1YDR049W GRX4P32642 244 aa7.12□□□□□ -1.27
VMS1YDR049W MFT1P33441 392 aaKnown RBP7.12□□□□□ -1.27
VMS1YDR049W POL5P39985 1022 aaKnown RBP7.12□□□□□ -1.27
VMS1YDR049W MSB4Q12317 492 aa7.11□□□□□ -1.27
VMS1YDR049W YBL113CQ7M4S9 792 aa7.11□□□□□ -1.27
VMS1YDR049W KAR1P11927 433 aa7.11□□□□□ -1.27
VMS1YDR049W EAP1P36041 632 aaKnown RBP7.11□□□□□ -1.27
VMS1YDR049W POB3Q04636 552 aaKnown RBP7.11□□□□□ -1.27
VMS1YDR049W JIP5Q06214 492 aaPredicted RBP7.11□□□□□ -1.27
VMS1YDR049W OYE2Q03558 400 aaKnown RBP7.1□□□□□ -1.27
VMS1YDR049W DNM1P54861 757 aa7.09□□□□□ -1.27
VMS1YDR049W YBL036CP38197 257 aa7.09□□□□□ -1.28
VMS1YDR049W IOC3P43596 787 aa7.09□□□□□ -1.28
VMS1YDR049W YKL091CP33324 310 aaKnown RBP7.08□□□□□ -1.28
VMS1YDR049W COG4Q06096 861 aa7.08□□□□□ -1.28
VMS1YDR049W CEF1Q03654 590 aaPredicted RBP7.07□□□□□ -1.28
VMS1YDR049W NHA1Q99271 985 aa7.07□□□□□ -1.28
VMS1YDR049W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
VMS1YDR049W SEC8P32855 1065 aa7.07□□□□□ -1.28
VMS1YDR049W ERP5P38819 212 aa7.07□□□□□ -1.28
VMS1YDR049W STB3Q12427 513 aa7.07□□□□□ -1.28
VMS1YDR049W NKP1Q12493 238 aa7.07□□□□□ -1.28
VMS1YDR049W COQ8P27697 501 aa7.06□□□□□ -1.28
VMS1YDR049W YGL081WP53156 320 aa7.06□□□□□ -1.28
VMS1YDR049W ESF2P53743 316 aaKnown RBP7.06□□□□□ -1.28
VMS1YDR049W DAL5P15365 543 aa7.05□□□□□ -1.28
VMS1YDR049W IES1P43579 692 aa7.05□□□□□ -1.28
VMS1YDR049W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
VMS1YDR049W SSF2Q12153 453 aaPredicted RBP7.05□□□□□ -1.28
VMS1YDR049W UBP14P38237 781 aaKnown RBP7.04□□□□□ -1.28
VMS1YDR049W VAC8P39968 578 aa7.04□□□□□ -1.28
VMS1YDR049W NSE3Q05541 303 aa7.04□□□□□ -1.28
VMS1YDR049W SPT16P32558 1035 aaKnown RBP7.04□□□□□ -1.28
VMS1YDR049W PSH1Q12161 406 aa7.04□□□□□ -1.28
VMS1YDR049W TAF13P11747 167 aa7.03□□□□□ -1.28
VMS1YDR049W PWP2P25635 923 aaKnown RBP7.03□□□□□ -1.28
VMS1YDR049W KTR1P27810 393 aaKnown RBP7.03□□□□□ -1.28
VMS1YDR049W SEC6P32844 805 aa7.03□□□□□ -1.28
VMS1YDR049W GRX7P38068 203 aa7.03□□□□□ -1.28
VMS1YDR049W ENP1P38333 483 aaKnown RBP7.03□□□□□ -1.28
VMS1YDR049W YHL050CP38721 697 aa7.03□□□□□ -1.28
VMS1YDR049W YHR219WP38900 624 aa7.03□□□□□ -1.28
VMS1YDR049W HOS4P40480 1083 aa7.03□□□□□ -1.28
VMS1YDR049W YNL108CP53929 270 aa7.03□□□□□ -1.28
VMS1YDR049W ENT2Q05785 613 aa7.03□□□□□ -1.28
VMS1YDR049W YEL077CQ3E7X8 1277 aa7.03□□□□□ -1.28
VMS1YDR049W RPN4Q03465 531 aa7.02□□□□□ -1.28
VMS1YDR049W WHI5Q12416 295 aa7.02□□□□□ -1.28
VMS1YDR049W YGR161W-CQ3E744 92 aa7.02□□□□□ -1.28
VMS1YDR049W RTG1P32607 177 aa7.02□□□□□ -1.29
VMS1YDR049W VPS24P36095 224 aaKnown RBP7.02□□□□□ -1.29
VMS1YDR049W SET4P42948 560 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms