RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W SPT5P27692 1063 aaKnown RBP9.1□□□□□ -0.95
TRP1YDR007W DPL1Q05567 589 aa9.1□□□□□ -0.95
TRP1YDR007W LAM6Q08001 693 aa9.1□□□□□ -0.95
TRP1YDR007W YRR1Q12172 810 aa9.09□□□□□ -0.95
TRP1YDR007W RSC30P38781 883 aa9.08□□□□□ -0.96
TRP1YDR007W VNX1P42839 908 aa9.08□□□□□ -0.96
TRP1YDR007W ENO2P00925 437 aaKnown RBP9.07□□□□□ -0.96
TRP1YDR007W YDJ1P25491 409 aaKnown RBP9.07□□□□□ -0.96
TRP1YDR007W ULI1P43604 169 aa9.07□□□□□ -0.96
TRP1YDR007W YNL115CP53925 644 aa9.07□□□□□ -0.96
TRP1YDR007W NOB1Q08444 459 aaKnown RBP9.07□□□□□ -0.96
TRP1YDR007W MAK16P10962 306 aaPredicted RBP9.06□□□□□ -0.96
TRP1YDR007W RTF1P53064 558 aa9.06□□□□□ -0.96
TRP1YDR007W ENO1P00924 437 aaKnown RBP9.05□□□□□ -0.96
TRP1YDR007W SIS2P36024 562 aa9.05□□□□□ -0.96
TRP1YDR007W MID1P41821 548 aa9.05□□□□□ -0.96
TRP1YDR007W PML39Q03760 334 aa9.05□□□□□ -0.96
TRP1YDR007W MPC54Q08550 464 aa9.05□□□□□ -0.96
TRP1YDR007W ISU2Q12056 156 aa9.04□□□□□ -0.96
TRP1YDR007W TIF11P38912 153 aaKnown RBP9.03□□□□□ -0.96
TRP1YDR007W CDC3P32457 520 aaKnown RBP9.02□□□□□ -0.97
TRP1YDR007W SLD2P34252 453 aa9.02□□□□□ -0.97
TRP1YDR007W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
TRP1YDR007W MRX10Q05648 414 aa9.02□□□□□ -0.97
TRP1YDR007W SPP1Q03012 353 aa9.01□□□□□ -0.97
TRP1YDR007W TRM1P15565 570 aaKnown RBP9□□□□□ -0.97
TRP1YDR007W PUP1P25043 261 aa9□□□□□ -0.97
TRP1YDR007W RIM21P48565 533 aa9□□□□□ -0.97
TRP1YDR007W PUS6P53294 404 aa9□□□□□ -0.97
TRP1YDR007W YNL035CP53962 389 aaKnown RBP9□□□□□ -0.97
TRP1YDR007W PEX29Q03370 554 aa9□□□□□ -0.97
TRP1YDR007W YPP1P46951 817 aa8.99□□□□□ -0.97
TRP1YDR007W NMA111P53920 997 aa8.98□□□□□ -0.97
TRP1YDR007W YML083CQ04526 418 aa8.98□□□□□ -0.97
TRP1YDR007W KEX2P13134 814 aa8.97□□□□□ -0.97
TRP1YDR007W NAF1P53919 492 aaKnown RBP8.97□□□□□ -0.97
TRP1YDR007W IOC2Q12072 812 aa8.97□□□□□ -0.97
TRP1YDR007W NUD1P32336 851 aa8.96□□□□□ -0.98
TRP1YDR007W TGL4P36165 910 aa8.96□□□□□ -0.98
TRP1YDR007W NPL4P33755 580 aa8.95□□□□□ -0.98
TRP1YDR007W TBF1Q02457 562 aa8.95□□□□□ -0.98
TRP1YDR007W ERF2Q06551 359 aa8.94□□□□□ -0.98
TRP1YDR007W RTG1P32607 177 aa8.92□□□□□ -0.98
TRP1YDR007W MCM16Q12262 181 aa8.91□□□□□ -0.98
TRP1YDR007W PEP12P32854 288 aa8.9□□□□□ -0.98
TRP1YDR007W SEC61P32915 480 aa8.9□□□□□ -0.98
TRP1YDR007W SSF1P38789 453 aaPredicted RBP8.9□□□□□ -0.98
TRP1YDR007W HAT1Q12341 374 aa8.9□□□□□ -0.98
TRP1YDR007W KTR7P40504 517 aa8.88□□□□□ -0.99
TRP1YDR007W TFG1P41895 735 aaPredicted RBP8.88□□□□□ -0.99
TRP1YDR007W MRX12P47084 519 aa8.88□□□□□ -0.99
TRP1YDR007W ECM23Q02710 187 aa8.88□□□□□ -0.99
TRP1YDR007W ENV9Q08651 330 aa8.88□□□□□ -0.99
TRP1YDR007W PDR1P12383 1068 aa8.87□□□□□ -0.99
TRP1YDR007W RDS2P19541 446 aaKnown RBP8.87□□□□□ -0.99
TRP1YDR007W LDB19Q12502 818 aa8.87□□□□□ -0.99
TRP1YDR007W ISF1P32488 338 aa8.86□□□□□ -0.99
TRP1YDR007W YDL206WQ12424 762 aa8.86□□□□□ -0.99
TRP1YDR007W EMP47P43555 445 aa8.85□□□□□ -0.99
TRP1YDR007W ISM1P48526 1002 aa8.85□□□□□ -0.99
TRP1YDR007W GCD11P32481 527 aaKnown RBP8.84□□□□□ -0.99
TRP1YDR007W STR2P47164 639 aa8.83□□□□□ -1
TRP1YDR007W TUB4P53378 473 aa8.83□□□□□ -1
TRP1YDR007W HAP5Q02516 242 aa8.83□□□□□ -1
TRP1YDR007W YDL129WQ07555 291 aa8.83□□□□□ -1
TRP1YDR007W RPA14P50106 137 aa8.82□□□□□ -1
TRP1YDR007W NCR1Q12200 1170 aa8.82□□□□□ -1
TRP1YDR007W GAL2P13181 574 aa8.81□□□□□ -1
TRP1YDR007W RAM1P22007 431 aa8.81□□□□□ -1
TRP1YDR007W HEM3P28789 327 aa8.81□□□□□ -1
TRP1YDR007W UBX7P38349 436 aa8.81□□□□□ -1
TRP1YDR007W NOP7P53261 605 aaKnown RBP8.81□□□□□ -1
TRP1YDR007W SEN54Q02825 467 aaPredicted RBP8.81□□□□□ -1
TRP1YDR007W STE20Q03497 939 aaKnown RBP8.81□□□□□ -1
TRP1YDR007W TEC1P18412 486 aa8.8□□□□□ -1
TRP1YDR007W SNU71P53207 620 aaKnown RBP8.8□□□□□ -1
TRP1YDR007W AGE1Q04412 482 aa8.8□□□□□ -1
TRP1YDR007W ATG3P40344 310 aa8.79□□□□□ -1
TRP1YDR007W YPR097WQ06839 1073 aa8.79□□□□□ -1
TRP1YDR007W GUT2P32191 649 aa8.78□□□□□ -1
TRP1YDR007W ALR1Q08269 859 aa8.78□□□□□ -1
TRP1YDR007W FRA1Q07825 749 aa8.77□□□□□ -1.01
TRP1YDR007W TY1A-DR4O74302 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-HP0C2I4 478 aaKnown RBP8.76□□□□□ -1.01
TRP1YDR007W TY1A-AP0CX57 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-PR1P0CX58 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-ORP0CX59 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-PR2P0CX60 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-DR5P0CX65 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-ER2P0CX66 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-GR3P0CX67 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-LR1P0CX68 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-MR2P0CX69 440 aa8.76□□□□□ -1.01
TRP1YDR007W SEC2P17065 759 aa8.76□□□□□ -1.01
TRP1YDR007W FKH1P40466 484 aa8.76□□□□□ -1.01
TRP1YDR007W FIG4P42837 879 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-JR2P47099 440 aa8.76□□□□□ -1.01
TRP1YDR007W ARH1P48360 493 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-DR1Q03856 440 aa8.76□□□□□ -1.01
TRP1YDR007W TY1A-ML1Q04706 440 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 148.1 ms