RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C SEC3P33332 1336 aaKnown RBP6.92□□□□□ -1.3
ATG20YDL113C SPE2P21182 396 aa6.91□□□□□ -1.3
ATG20YDL113C YLR419WQ06698 1435 aaKnown RBP6.91□□□□□ -1.3
ATG20YDL113C ENP1P38333 483 aaKnown RBP6.91□□□□□ -1.3
ATG20YDL113C PDS5Q04264 1277 aa6.91□□□□□ -1.3
ATG20YDL113C ALD4P46367 519 aaKnown RBP6.9□□□□□ -1.3
ATG20YDL113C NST1P53935 1240 aa6.89□□□□□ -1.31
ATG20YDL113C MGA2P40578 1113 aa6.89□□□□□ -1.31
ATG20YDL113C RLF2Q12495 606 aa6.88□□□□□ -1.31
ATG20YDL113C KRE5P22023 1365 aa6.87□□□□□ -1.31
ATG20YDL113C CHZ1P40019 153 aaPredicted RBP6.86□□□□□ -1.31
ATG20YDL113C MRX12P47084 519 aa6.86□□□□□ -1.31
ATG20YDL113C RTG3P38165 486 aa6.85□□□□□ -1.31
ATG20YDL113C RIA1P53893 1110 aa6.85□□□□□ -1.31
ATG20YDL113C BCK1Q01389 1478 aa6.84□□□□□ -1.31
ATG20YDL113C MAK10Q02197 733 aa6.84□□□□□ -1.32
ATG20YDL113C CST9Q06032 482 aa6.83□□□□□ -1.32
ATG20YDL113C YIL055CP40523 627 aaKnown RBP6.82□□□□□ -1.32
ATG20YDL113C DNF3Q12674 1656 aa6.82□□□□□ -1.32
ATG20YDL113C RCM1P53972 490 aa6.82□□□□□ -1.32
ATG20YDL113C NAP1P25293 417 aaKnown RBP6.81□□□□□ -1.32
ATG20YDL113C PRY3P47033 881 aa6.79□□□□□ -1.32
ATG20YDL113C PPH3P32345 308 aa6.78□□□□□ -1.32
ATG20YDL113C PRS1P32895 427 aaKnown RBP6.78□□□□□ -1.32
ATG20YDL113C FKH1P40466 484 aa6.78□□□□□ -1.32
ATG20YDL113C TRK1P12685 1235 aa6.76□□□□□ -1.33
ATG20YDL113C SCT1P32784 759 aa6.76□□□□□ -1.33
ATG20YDL113C RSM7P47150 247 aa6.76□□□□□ -1.33
ATG20YDL113C YML133CQ03099 1374 aa6.74□□□□□ -1.33
ATG20YDL113C CFT1Q06632 1357 aaKnown RBP6.74□□□□□ -1.33
ATG20YDL113C YLL067CQ07888 1374 aa6.74□□□□□ -1.33
ATG20YDL113C YLL066CQ99208 1374 aa6.74□□□□□ -1.33
ATG20YDL113C YEF3P16521 1044 aaKnown RBP6.74□□□□□ -1.33
ATG20YDL113C YNR029CP53729 429 aaKnown RBP6.74□□□□□ -1.33
ATG20YDL113C HAP1P0CE41 1502 aa6.74□□□□□ -1.33
ATG20YDL113C SPB4P25808 606 aaPredicted RBP6.74□□□□□ -1.33
ATG20YDL113C NOP2P40991 618 aaKnown RBP6.74□□□□□ -1.33
ATG20YDL113C YKR023WP36119 530 aaKnown RBP6.73□□□□□ -1.33
ATG20YDL113C FUN12P39730 1002 aaKnown RBP6.73□□□□□ -1.33
ATG20YDL113C CPS1P27614 576 aa6.72□□□□□ -1.33
ATG20YDL113C YPR148CQ06523 435 aa6.72□□□□□ -1.33
ATG20YDL113C MLP1Q02455 1875 aaKnown RBP6.7□□□□□ -1.34
ATG20YDL113C SET1P38827 1080 aaKnown RBP6.69□□□□□ -1.34
ATG20YDL113C HIM1Q06674 414 aa6.69□□□□□ -1.34
ATG20YDL113C PSK1P31374 1356 aa6.69□□□□□ -1.34
ATG20YDL113C LEU2P04173 364 aaPredicted RBP6.68□□□□□ -1.34
ATG20YDL113C AAD16Q02895 342 aa6.68□□□□□ -1.34
ATG20YDL113C RAM2P29703 316 aa6.68□□□□□ -1.34
ATG20YDL113C THI12P42883 340 aa6.68□□□□□ -1.34
ATG20YDL113C THI5P43534 340 aa6.68□□□□□ -1.34
ATG20YDL113C VPS70P47161 811 aa6.68□□□□□ -1.34
ATG20YDL113C THI11P47183 340 aa6.68□□□□□ -1.34
ATG20YDL113C YDL144CQ07589 356 aa6.68□□□□□ -1.34
ATG20YDL113C THI13Q07748 340 aa6.68□□□□□ -1.34
ATG20YDL113C USO1P25386 1790 aa6.67□□□□□ -1.34
ATG20YDL113C RPS24AP0CX31 135 aaKnown RBP6.67□□□□□ -1.34
ATG20YDL113C RPS24BP0CX32 135 aaKnown RBP6.67□□□□□ -1.34
ATG20YDL113C KAR2P16474 682 aaKnown RBP6.67□□□□□ -1.34
ATG20YDL113C CSE4P36012 229 aa6.66□□□□□ -1.34
ATG20YDL113C PAP2P53632 584 aaKnown RBP6.66□□□□□ -1.34
ATG20YDL113C GAS4Q08271 471 aa6.66□□□□□ -1.34
ATG20YDL113C MPP10P47083 593 aaKnown RBP6.66□□□□□ -1.34
ATG20YDL113C RRP46P53256 223 aaPredicted RBP6.66□□□□□ -1.34
ATG20YDL113C PDI1P17967 522 aaKnown RBP6.65□□□□□ -1.34
ATG20YDL113C TSR3Q12094 313 aaKnown RBP6.65□□□□□ -1.34
ATG20YDL113C MTR4P47047 1073 aaKnown RBP6.64□□□□□ -1.35
ATG20YDL113C RTR1P40084 226 aaPredicted RBP6.64□□□□□ -1.35
ATG20YDL113C YMR196WQ04336 1088 aa6.64□□□□□ -1.35
ATG20YDL113C RVB2Q12464 471 aaKnown RBP6.64□□□□□ -1.35
ATG20YDL113C DSF2P38213 736 aa6.63□□□□□ -1.35
ATG20YDL113C VPS27P40343 622 aaKnown RBP6.63□□□□□ -1.35
ATG20YDL113C AUS1Q08409 1394 aa6.63□□□□□ -1.35
ATG20YDL113C KIN1P13185 1064 aa6.62□□□□□ -1.35
ATG20YDL113C SUI2P20459 304 aaKnown RBP6.62□□□□□ -1.35
ATG20YDL113C RTF1P53064 558 aa6.62□□□□□ -1.35
ATG20YDL113C DPS1P04802 557 aaKnown RBP6.62□□□□□ -1.35
ATG20YDL113C CDC45Q08032 650 aa6.62□□□□□ -1.35
ATG20YDL113C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
ATG20YDL113C TAP42Q04372 366 aa6.61□□□□□ -1.35
ATG20YDL113C TY1B-NL2Q99337 1749 aaKnown RBP6.6□□□□□ -1.35
ATG20YDL113C RPP0P05317 312 aaKnown RBP6.6□□□□□ -1.35
ATG20YDL113C MIF2P35201 549 aa6.6□□□□□ -1.35
ATG20YDL113C AI2P03876 854 aa6.59□□□□□ -1.35
ATG20YDL113C ADE6P38972 1358 aaKnown RBP6.59□□□□□ -1.35
ATG20YDL113C PRD1P25375 712 aa6.58□□□□□ -1.36
ATG20YDL113C TPD3P31383 635 aa6.58□□□□□ -1.36
ATG20YDL113C GRX4P32642 244 aa6.58□□□□□ -1.36
ATG20YDL113C SAP155P43612 1002 aa6.58□□□□□ -1.36
ATG20YDL113C THI22Q06490 572 aa6.58□□□□□ -1.36
ATG20YDL113C PRP43P53131 767 aaKnown RBP6.57□□□□□ -1.36
ATG20YDL113C YNR021WP53723 404 aaKnown RBP6.57□□□□□ -1.36
ATG20YDL113C TFC8Q12308 588 aa6.57□□□□□ -1.36
ATG20YDL113C HOP09932 586 aa6.56□□□□□ -1.36
ATG20YDL113C SNF2P22082 1703 aa6.56□□□□□ -1.36
ATG20YDL113C PRP45P28004 379 aaPredicted RBP6.56□□□□□ -1.36
ATG20YDL113C IOC4Q04213 475 aa6.56□□□□□ -1.36
ATG20YDL113C PBS2P08018 668 aa6.55□□□□□ -1.36
ATG20YDL113C RTT109Q07794 436 aa6.55□□□□□ -1.36
ATG20YDL113C PRP5P21372 849 aaPredicted RBP6.54□□□□□ -1.36
ATG20YDL113C RCR1P38212 213 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms