RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W RTF1P53064 558 aa9.03□□□□□ -0.96
PAF1YBR279W YNL115CP53925 644 aa9.01□□□□□ -0.97
PAF1YBR279W TFB3Q03290 321 aa9.01□□□□□ -0.97
PAF1YBR279W TYW1Q08960 810 aaKnown RBP9.01□□□□□ -0.97
PAF1YBR279W PDR1P12383 1068 aa9□□□□□ -0.97
PAF1YBR279W SLY41P22215 453 aa8.97□□□□□ -0.97
PAF1YBR279W KTR1P27810 393 aaKnown RBP8.96□□□□□ -0.98
PAF1YBR279W PKH3Q03306 898 aaPredicted RBP8.96□□□□□ -0.98
PAF1YBR279W YDR344CQ05510 147 aa8.96□□□□□ -0.98
PAF1YBR279W ESS1P22696 170 aa8.95□□□□□ -0.98
PAF1YBR279W YML082WQ04533 649 aaKnown RBP8.95□□□□□ -0.98
PAF1YBR279W KEX2P13134 814 aa8.94□□□□□ -0.98
PAF1YBR279W SCJ1P25303 377 aa8.94□□□□□ -0.98
PAF1YBR279W GCD11P32481 527 aaKnown RBP8.94□□□□□ -0.98
PAF1YBR279W ISM1P48526 1002 aa8.92□□□□□ -0.98
PAF1YBR279W ARG8P18544 423 aa8.91□□□□□ -0.98
PAF1YBR279W STR2P47164 639 aa8.91□□□□□ -0.98
PAF1YBR279W LAM6Q08001 693 aa8.91□□□□□ -0.98
PAF1YBR279W RLF2Q12495 606 aa8.91□□□□□ -0.98
PAF1YBR279W RAM1P22007 431 aa8.9□□□□□ -0.98
PAF1YBR279W RAD59Q12223 238 aa8.9□□□□□ -0.98
PAF1YBR279W PAT1P25644 796 aaKnown RBP8.89□□□□□ -0.99
PAF1YBR279W YBL036CP38197 257 aa8.89□□□□□ -0.99
PAF1YBR279W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
PAF1YBR279W PUS6P53294 404 aa8.89□□□□□ -0.99
PAF1YBR279W TBF1Q02457 562 aa8.89□□□□□ -0.99
PAF1YBR279W PRT1P06103 763 aaKnown RBP8.88□□□□□ -0.99
PAF1YBR279W CSE4P36012 229 aa8.88□□□□□ -0.99
PAF1YBR279W PKC1P24583 1151 aa8.87□□□□□ -0.99
PAF1YBR279W YJU3P28321 313 aa8.87□□□□□ -0.99
PAF1YBR279W BUD20Q08004 166 aaPredicted RBP8.87□□□□□ -0.99
PAF1YBR279W ERF2Q06551 359 aa8.85□□□□□ -0.99
PAF1YBR279W SAS4Q04003 481 aa8.84□□□□□ -0.99
PAF1YBR279W GYP1Q08484 637 aa8.84□□□□□ -0.99
PAF1YBR279W TRM1P15565 570 aaKnown RBP8.83□□□□□ -1
PAF1YBR279W YJL007CP47080 104 aa8.83□□□□□ -1
PAF1YBR279W SPT16P32558 1035 aaKnown RBP8.82□□□□□ -1
PAF1YBR279W YPR015CQ12531 247 aa8.82□□□□□ -1
PAF1YBR279W RPL34BP40525 121 aaKnown RBP8.81□□□□□ -1
PAF1YBR279W TY1A-DR4O74302 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-HP0C2I4 478 aaKnown RBP8.8□□□□□ -1
PAF1YBR279W TY1A-AP0CX57 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-PR1P0CX58 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-ORP0CX59 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-PR2P0CX60 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-DR5P0CX65 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-ER2P0CX66 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-GR3P0CX67 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-LR1P0CX68 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-MR2P0CX69 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-JR2P47099 440 aa8.8□□□□□ -1
PAF1YBR279W TUB4P53378 473 aa8.8□□□□□ -1
PAF1YBR279W TY1A-DR1Q03856 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-ML1Q04706 440 aaKnown RBP8.8□□□□□ -1
PAF1YBR279W TY1A-BRQ12217 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-NL2Q12470 440 aa8.8□□□□□ -1
PAF1YBR279W TY1A-GR2Q12485 440 aa8.8□□□□□ -1
PAF1YBR279W SEC2P17065 759 aa8.8□□□□□ -1
PAF1YBR279W RSC30P38781 883 aa8.8□□□□□ -1
PAF1YBR279W VRP1P37370 817 aa8.79□□□□□ -1
PAF1YBR279W SPT5P27692 1063 aaKnown RBP8.78□□□□□ -1
PAF1YBR279W BIM1P40013 344 aa8.78□□□□□ -1
PAF1YBR279W RRN7P40992 514 aa8.78□□□□□ -1
PAF1YBR279W MRF1P30775 413 aaPredicted RBP8.77□□□□□ -1.01
PAF1YBR279W KXD1P53158 218 aa8.77□□□□□ -1.01
PAF1YBR279W ALR1Q08269 859 aa8.77□□□□□ -1.01
PAF1YBR279W MAK16P10962 306 aaPredicted RBP8.76□□□□□ -1.01
PAF1YBR279W RPA14P50106 137 aa8.76□□□□□ -1.01
PAF1YBR279W AGE1Q04412 482 aa8.76□□□□□ -1.01
PAF1YBR279W YDL206WQ12424 762 aa8.76□□□□□ -1.01
PAF1YBR279W BCK2P33306 851 aa8.75□□□□□ -1.01
PAF1YBR279W ATG32P40458 529 aa8.72□□□□□ -1.01
PAF1YBR279W NAF1P53919 492 aaKnown RBP8.72□□□□□ -1.01
PAF1YBR279W YPR097WQ06839 1073 aa8.72□□□□□ -1.01
PAF1YBR279W ERG12P07277 443 aa8.71□□□□□ -1.02
PAF1YBR279W PAC1P39946 494 aaKnown RBP8.71□□□□□ -1.02
PAF1YBR279W BIO2P32451 375 aa8.7□□□□□ -1.02
PAF1YBR279W TIF1P10081 395 aaKnown RBP8.69□□□□□ -1.02
PAF1YBR279W YNL108CP53929 270 aa8.69□□□□□ -1.02
PAF1YBR279W YPP1P46951 817 aa8.68□□□□□ -1.02
PAF1YBR279W PDC1P06169 563 aaKnown RBP8.66□□□□□ -1.02
PAF1YBR279W RTG2P32608 588 aaKnown RBP8.66□□□□□ -1.02
PAF1YBR279W HXT10P43581 546 aa8.66□□□□□ -1.02
PAF1YBR279W SUP45P12385 437 aaKnown RBP8.65□□□□□ -1.02
PAF1YBR279W XDJ1P39102 459 aa8.65□□□□□ -1.02
PAF1YBR279W TPD3P31383 635 aa8.64□□□□□ -1.03
PAF1YBR279W YEL077CQ3E7X8 1277 aa8.64□□□□□ -1.03
PAF1YBR279W YDJ1P25491 409 aaKnown RBP8.62□□□□□ -1.03
PAF1YBR279W TEC1P18412 486 aa8.61□□□□□ -1.03
PAF1YBR279W RRD1P40454 393 aaKnown RBP8.61□□□□□ -1.03
PAF1YBR279W YPR204WQ08995 1032 aa8.61□□□□□ -1.03
PAF1YBR279W ENO2P00925 437 aaKnown RBP8.59□□□□□ -1.03
PAF1YBR279W GUT2P32191 649 aa8.59□□□□□ -1.03
PAF1YBR279W SIS2P36024 562 aa8.59□□□□□ -1.03
PAF1YBR279W MOD5P07884 428 aa8.58□□□□□ -1.04
PAF1YBR279W MRX12P47084 519 aa8.58□□□□□ -1.04
PAF1YBR279W STE20Q03497 939 aaKnown RBP8.58□□□□□ -1.04
PAF1YBR279W MCM16Q12262 181 aa8.58□□□□□ -1.04
PAF1YBR279W SSA4P22202 642 aaKnown RBP8.56□□□□□ -1.04
PAF1YBR279W ATG3P40344 310 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 712.5 ms