RNA–Protein interactions for RNA: YBR273C

UBX7, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeast

Gene UBX7, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBX7	YBR273C	BNR1	P40450	1375 aa		6.44	□□□□□ -1.38
UBX7	YBR273C	RAV1	P47104	1357 aa		6.43	□□□□□ -1.38
UBX7	YBR273C	AIR2	Q12476	344 aa	Known RBP	6.43	□□□□□ -1.38
UBX7	YBR273C	PRS1	P32895	427 aa	Known RBP	6.42	□□□□□ -1.38
UBX7	YBR273C	RTC1	Q08281	1341 aa		6.42	□□□□□ -1.38
UBX7	YBR273C	TIF11	P38912	153 aa	Known RBP	6.41	□□□□□ -1.38
UBX7	YBR273C	YJL171C	P46992	396 aa		6.41	□□□□□ -1.38
UBX7	YBR273C	FKH1	P40466	484 aa		6.4	□□□□□ -1.39
UBX7	YBR273C	RSM7	P47150	247 aa		6.4	□□□□□ -1.39
UBX7	YBR273C	TRM3	Q07527	1436 aa		6.4	□□□□□ -1.39
UBX7	YBR273C	TFA1	P36100	482 aa		6.38	□□□□□ -1.39
UBX7	YBR273C	PSD2	P53037	1138 aa	Known RBP	6.38	□□□□□ -1.39
UBX7	YBR273C	WSC3	Q12215	556 aa		6.38	□□□□□ -1.39
UBX7	YBR273C	NUP188	P52593	1655 aa	Known RBP	6.37	□□□□□ -1.39
UBX7	YBR273C	DOP1	Q03921	1698 aa		6.37	□□□□□ -1.39
UBX7	YBR273C	AI2	P03876	854 aa		6.37	□□□□□ -1.39
UBX7	YBR273C	ESL2	P36168	1195 aa		6.37	□□□□□ -1.39
UBX7	YBR273C	VMR1	P38735	1592 aa		6.36	□□□□□ -1.39
UBX7	YBR273C	PDS5	Q04264	1277 aa		6.36	□□□□□ -1.39
UBX7	YBR273C	IML1	P47170	1584 aa		6.36	□□□□□ -1.39
UBX7	YBR273C	PDR11	P40550	1411 aa		6.34	□□□□□ -1.4
UBX7	YBR273C	DRS2	P39524	1355 aa		6.34	□□□□□ -1.4
UBX7	YBR273C	LEU3	P08638	886 aa		6.33	□□□□□ -1.4
UBX7	YBR273C	GTT3	P39996	337 aa		6.33	□□□□□ -1.4
UBX7	YBR273C	TAF5	P38129	798 aa		6.32	□□□□□ -1.4
UBX7	YBR273C	ORC1	P54784	914 aa	Predicted RBP	6.32	□□□□□ -1.4
UBX7	YBR273C	DNF2	Q12675	1612 aa		6.32	□□□□□ -1.4
UBX7	YBR273C	KIP3	P53086	805 aa	Known RBP	6.3	□□□□□ -1.4
UBX7	YBR273C	NUP192	P47054	1683 aa		6.3	□□□□□ -1.4
UBX7	YBR273C	RPP0	P05317	312 aa	Known RBP	6.29	□□□□□ -1.4
UBX7	YBR273C	IOC4	Q04213	475 aa		6.29	□□□□□ -1.4
UBX7	YBR273C	IOC2	Q12072	812 aa		6.28	□□□□□ -1.4
UBX7	YBR273C	LDB19	Q12502	818 aa		6.28	□□□□□ -1.4
UBX7	YBR273C	ULI1	P43604	169 aa		6.27	□□□□□ -1.41
UBX7	YBR273C	BMT6	Q12291	365 aa		6.27	□□□□□ -1.41
UBX7	YBR273C	MLP1	Q02455	1875 aa	Known RBP	6.27	□□□□□ -1.41
UBX7	YBR273C	SPE2	P21182	396 aa		6.26	□□□□□ -1.41
UBX7	YBR273C	URN1	Q06525	465 aa	Known RBP	6.26	□□□□□ -1.41
UBX7	YBR273C	CDC45	Q08032	650 aa		6.25	□□□□□ -1.41
UBX7	YBR273C	VPS27	P40343	622 aa	Known RBP	6.25	□□□□□ -1.41
UBX7	YBR273C	YRB30	P53107	440 aa	Predicted RBP	6.24	□□□□□ -1.41
UBX7	YBR273C	HAP1	P0CE41	1502 aa		6.24	□□□□□ -1.41
UBX7	YBR273C	NAP1	P25293	417 aa	Known RBP	6.23	□□□□□ -1.41
UBX7	YBR273C	MSB4	Q12317	492 aa		6.23	□□□□□ -1.41
UBX7	YBR273C	BCK1	Q01389	1478 aa		6.22	□□□□□ -1.41
UBX7	YBR273C	IPL1	P38991	367 aa		6.22	□□□□□ -1.41
UBX7	YBR273C	EAP1	P36041	632 aa	Known RBP	6.21	□□□□□ -1.42
UBX7	YBR273C	ALD4	P46367	519 aa	Known RBP	6.21	□□□□□ -1.42
UBX7	YBR273C	NST1	P53935	1240 aa		6.21	□□□□□ -1.42
UBX7	YBR273C	YAH1	Q12184	172 aa	Known RBP	6.21	□□□□□ -1.42
UBX7	YBR273C	CFT1	Q06632	1357 aa	Known RBP	6.19	□□□□□ -1.42
UBX7	YBR273C	FPR3	P38911	411 aa	Known RBP	6.19	□□□□□ -1.42
UBX7	YBR273C	TAF8	Q03750	510 aa		6.19	□□□□□ -1.42
UBX7	YBR273C	SNF2	P22082	1703 aa		6.18	□□□□□ -1.42
UBX7	YBR273C	RTG3	P38165	486 aa		6.18	□□□□□ -1.42
UBX7	YBR273C	YAP3	P38749	330 aa		6.18	□□□□□ -1.42
UBX7	YBR273C	TYS1	P36421	394 aa	Known RBP	6.17	□□□□□ -1.42
UBX7	YBR273C	CHZ1	P40019	153 aa	Predicted RBP	6.17	□□□□□ -1.42
UBX7	YBR273C	YDL144C	Q07589	356 aa		6.16	□□□□□ -1.42
UBX7	YBR273C	RVB2	Q12464	471 aa	Known RBP	6.16	□□□□□ -1.42
UBX7	YBR273C	RAD9	P14737	1309 aa		6.16	□□□□□ -1.42
UBX7	YBR273C	YLR271W	Q06152	274 aa		6.15	□□□□□ -1.43
UBX7	YBR273C	RPC31	P17890	251 aa		6.14	□□□□□ -1.43
UBX7	YBR273C	PIB1	Q06651	286 aa		6.13	□□□□□ -1.43
UBX7	YBR273C	DNF3	Q12674	1656 aa		6.12	□□□□□ -1.43
UBX7	YBR273C	YEF3	P16521	1044 aa	Known RBP	6.12	□□□□□ -1.43
UBX7	YBR273C	RTG1	P32607	177 aa		6.12	□□□□□ -1.43
UBX7	YBR273C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.12	□□□□□ -1.43	not detected
UBX7	YBR273C	NCR1	Q12200	1170 aa		6.12	□□□□□ -1.43
UBX7	YBR273C	BNI1	P41832	1953 aa		6.11	□□□□□ -1.43
UBX7	YBR273C	PSK1	P31374	1356 aa		6.11	□□□□□ -1.43
UBX7	YBR273C	YML133C	Q03099	1374 aa		6.11	□□□□□ -1.43
UBX7	YBR273C	YLL067C	Q07888	1374 aa		6.11	□□□□□ -1.43
UBX7	YBR273C	YLL066C	Q99208	1374 aa		6.11	□□□□□ -1.43
UBX7	YBR273C	TRK1	P12685	1235 aa		6.11	□□□□□ -1.43
UBX7	YBR273C	CAB1	Q04430	367 aa		6.11	□□□□□ -1.43
UBX7	YBR273C	ABP1	P15891	592 aa	Known RBP	6.1	□□□□□ -1.43
UBX7	YBR273C	SUI2	P20459	304 aa	Known RBP	6.1	□□□□□ -1.43
UBX7	YBR273C	SEC61	P32915	480 aa		6.1	□□□□□ -1.43
UBX7	YBR273C	TRP5	P00931	707 aa	Known RBP	6.09	□□□□□ -1.43
UBX7	YBR273C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	not detected
UBX7	YBR273C	YNL035C	P53962	389 aa	Known RBP	6.09	□□□□□ -1.43
UBX7	YBR273C	TAP42	Q04372	366 aa		6.09	□□□□□ -1.43
UBX7	YBR273C	YOL036W	Q08206	761 aa		6.09	□□□□□ -1.43
UBX7	YBR273C	YRF1-4	O13559	1382 aa		6.09	□□□□□ -1.44
UBX7	YBR273C	RAD2	P07276	1031 aa		6.08	□□□□□ -1.44
UBX7	YBR273C	KAR2	P16474	682 aa	Known RBP	6.08	□□□□□ -1.44
UBX7	YBR273C	FUN12	P39730	1002 aa	Known RBP	6.08	□□□□□ -1.44
UBX7	YBR273C	RTR1	P40084	226 aa	Predicted RBP	6.08	□□□□□ -1.44
UBX7	YBR273C	MPP10	P47083	593 aa	Known RBP	6.08	□□□□□ -1.44
UBX7	YBR273C	MRX12	P47084	519 aa		6.08	□□□□□ -1.44
UBX7	YBR273C	ITT1	Q04638	464 aa		6.08	□□□□□ -1.44
UBX7	YBR273C	KRE5	P22023	1365 aa		6.08	□□□□□ -1.44
UBX7	YBR273C	PDI1	P17967	522 aa	Known RBP	6.07	□□□□□ -1.44
UBX7	YBR273C	MRM1	P25270	412 aa		6.07	□□□□□ -1.44
UBX7	YBR273C	IME2	P32581	645 aa		6.07	□□□□□ -1.44
UBX7	YBR273C	YIR014W	P40570	242 aa		6.07	□□□□□ -1.44
UBX7	YBR273C	SIR4	P11978	1358 aa		6.07	□□□□□ -1.44
UBX7	YBR273C	GRX4	P32642	244 aa		6.06	□□□□□ -1.44
UBX7	YBR273C	SET4	P42948	560 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms