RNA–Protein interactions for RNA: YBR041W

FAT1, Transcript of Very long chain fatty acyl-CoA synthetase and fatty acid transporter, yeast

Gene FAT1, Length 2,010 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAT1	YBR041W	URN1	Q06525	465 aa	Known RBP	4.99	□□□□□ -1.61
FAT1	YBR041W	SNF2	P22082	1703 aa		4.98	□□□□□ -1.61
FAT1	YBR041W	KIP3	P53086	805 aa	Known RBP	4.98	□□□□□ -1.61
FAT1	YBR041W	TYS1	P36421	394 aa	Known RBP	4.97	□□□□□ -1.61
FAT1	YBR041W	SPE2	P21182	396 aa		4.97	□□□□□ -1.61
FAT1	YBR041W	CDC27	P38042	758 aa		4.96	□□□□□ -1.62
FAT1	YBR041W	YAP3	P38749	330 aa		4.96	□□□□□ -1.62
FAT1	YBR041W	RAD9	P14737	1309 aa		4.96	□□□□□ -1.62
FAT1	YBR041W	ALD4	P46367	519 aa	Known RBP	4.96	□□□□□ -1.62
FAT1	YBR041W	ORC1	P54784	914 aa	Predicted RBP	4.96	□□□□□ -1.62
FAT1	YBR041W	YML133C	Q03099	1374 aa		4.95	□□□□□ -1.62
FAT1	YBR041W	YLL067C	Q07888	1374 aa		4.95	□□□□□ -1.62
FAT1	YBR041W	YLL066C	Q99208	1374 aa		4.95	□□□□□ -1.62
FAT1	YBR041W	NST1	P53935	1240 aa		4.95	□□□□□ -1.62
FAT1	YBR041W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.94	□□□□□ -1.62
FAT1	YBR041W	FKH1	P40466	484 aa		4.94	□□□□□ -1.62
FAT1	YBR041W	CFT1	Q06632	1357 aa	Known RBP	4.93	□□□□□ -1.62
FAT1	YBR041W	RPP0	P05317	312 aa	Known RBP	4.92	□□□□□ -1.62
FAT1	YBR041W	LEU3	P08638	886 aa		4.92	□□□□□ -1.62
FAT1	YBR041W	USO1	P25386	1790 aa		4.92	□□□□□ -1.62
FAT1	YBR041W	TAF8	Q03750	510 aa		4.92	□□□□□ -1.62
FAT1	YBR041W	PSK1	P31374	1356 aa		4.92	□□□□□ -1.62
FAT1	YBR041W	RTG3	P38165	486 aa		4.9	□□□□□ -1.63
FAT1	YBR041W	YEF3	P16521	1044 aa	Known RBP	4.89	□□□□□ -1.63
FAT1	YBR041W	APC1	P53886	1748 aa		4.89	□□□□□ -1.63
FAT1	YBR041W	NAP1	P25293	417 aa	Known RBP	4.89	□□□□□ -1.63
FAT1	YBR041W	YKR023W	P36119	530 aa	Known RBP	4.89	□□□□□ -1.63
FAT1	YBR041W	CAB1	Q04430	367 aa		4.89	□□□□□ -1.63
FAT1	YBR041W	CDC45	Q08032	650 aa		4.88	□□□□□ -1.63
FAT1	YBR041W	SPT21	P35209	758 aa		4.87	□□□□□ -1.63
FAT1	YBR041W	VPS27	P40343	622 aa	Known RBP	4.87	□□□□□ -1.63
FAT1	YBR041W	CHZ1	P40019	153 aa	Predicted RBP	4.87	□□□□□ -1.63
FAT1	YBR041W	KRE5	P22023	1365 aa		4.86	□□□□□ -1.63
FAT1	YBR041W	TY4B-H	P0C2J7	1802 aa		4.86	□□□□□ -1.63
FAT1	YBR041W	TY4B-J	P47024	1803 aa		4.86	□□□□□ -1.63
FAT1	YBR041W	TRK1	P12685	1235 aa		4.85	□□□□□ -1.63
FAT1	YBR041W	YRB30	P53107	440 aa	Predicted RBP	4.85	□□□□□ -1.63
FAT1	YBR041W	AUS1	Q08409	1394 aa		4.85	□□□□□ -1.63
FAT1	YBR041W	YIL177C	P40434	1758 aa		4.84	□□□□□ -1.63
FAT1	YBR041W	YJL225C	P40889	1758 aa		4.84	□□□□□ -1.63
FAT1	YBR041W	TAP42	Q04372	366 aa		4.84	□□□□□ -1.63
FAT1	YBR041W	YRF1-2	P40105	1681 aa		4.84	□□□□□ -1.63
FAT1	YBR041W	YDL144C	Q07589	356 aa		4.83	□□□□□ -1.64
FAT1	YBR041W	RVB2	Q12464	471 aa	Known RBP	4.83	□□□□□ -1.64
FAT1	YBR041W	PPH3	P32345	308 aa		4.82	□□□□□ -1.64
FAT1	YBR041W	MRX12	P47084	519 aa		4.82	□□□□□ -1.64
FAT1	YBR041W	RRP46	P53256	223 aa	Predicted RBP	4.82	□□□□□ -1.64
FAT1	YBR041W	ADE6	P38972	1358 aa	Known RBP	4.82	□□□□□ -1.64
FAT1	YBR041W	RRP5	Q05022	1729 aa	Known RBP	4.82	□□□□□ -1.64
FAT1	YBR041W	YRF1-4	O13559	1382 aa		4.82	□□□□□ -1.64
FAT1	YBR041W	SIR4	P11978	1358 aa		4.82	□□□□□ -1.64
FAT1	YBR041W	SUI2	P20459	304 aa	Known RBP	4.82	□□□□□ -1.64
FAT1	YBR041W	MAP2	P38174	421 aa	Known RBP	4.82	□□□□□ -1.64
FAT1	YBR041W	MAK10	Q02197	733 aa		4.82	□□□□□ -1.64
FAT1	YBR041W	RIA1	P53893	1110 aa		4.81	□□□□□ -1.64
FAT1	YBR041W	PRP43	P53131	767 aa	Known RBP	4.8	□□□□□ -1.64
FAT1	YBR041W	RCM1	P53972	490 aa		4.8	□□□□□ -1.64
FAT1	YBR041W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
FAT1	YBR041W	CPS1	P27614	576 aa		4.8	□□□□□ -1.64
FAT1	YBR041W	YNR029C	P53729	429 aa	Known RBP	4.8	□□□□□ -1.64
FAT1	YBR041W	FKS3	Q04952	1785 aa		4.79	□□□□□ -1.64
FAT1	YBR041W	DCD1	P06773	312 aa		4.79	□□□□□ -1.64
FAT1	YBR041W	HO	P09932	586 aa		4.79	□□□□□ -1.64
FAT1	YBR041W	GRX4	P32642	244 aa		4.79	□□□□□ -1.64
FAT1	YBR041W	MPP10	P47083	593 aa	Known RBP	4.79	□□□□□ -1.64
FAT1	YBR041W	UBP10	P53874	792 aa	Predicted RBP	4.79	□□□□□ -1.64
FAT1	YBR041W	URB1	P34241	1764 aa	Known RBP	4.79	□□□□□ -1.64
FAT1	YBR041W	RPO41	P13433	1351 aa	Known RBP	4.79	□□□□□ -1.64
FAT1	YBR041W	PDI1	P17967	522 aa	Known RBP	4.79	□□□□□ -1.64
FAT1	YBR041W	MTR4	P47047	1073 aa	Known RBP	4.79	□□□□□ -1.64
FAT1	YBR041W	LEU2	P04173	364 aa	Predicted RBP	4.78	□□□□□ -1.64
FAT1	YBR041W	HEF3	P53978	1044 aa	Known RBP	4.78	□□□□□ -1.64
FAT1	YBR041W	KAR2	P16474	682 aa	Known RBP	4.77	□□□□□ -1.65
FAT1	YBR041W	RTR1	P40084	226 aa	Predicted RBP	4.77	□□□□□ -1.65
FAT1	YBR041W	PRD1	P25375	712 aa		4.77	□□□□□ -1.65
FAT1	YBR041W	THI22	Q06490	572 aa		4.77	□□□□□ -1.65
FAT1	YBR041W	TFC8	Q12308	588 aa		4.77	□□□□□ -1.65
FAT1	YBR041W	SAP155	P43612	1002 aa		4.76	□□□□□ -1.65
FAT1	YBR041W	RTF1	P53064	558 aa		4.75	□□□□□ -1.65
FAT1	YBR041W	HIM1	Q06674	414 aa		4.75	□□□□□ -1.65
FAT1	YBR041W	ABP1	P15891	592 aa	Known RBP	4.75	□□□□□ -1.65
FAT1	YBR041W	FUN12	P39730	1002 aa	Known RBP	4.75	□□□□□ -1.65
FAT1	YBR041W	YIL092W	P40497	633 aa		4.73	□□□□□ -1.65
FAT1	YBR041W	YIR014W	P40570	242 aa		4.73	□□□□□ -1.65
FAT1	YBR041W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
FAT1	YBR041W	RPC31	P17890	251 aa		4.73	□□□□□ -1.65
FAT1	YBR041W	TPD3	P31383	635 aa		4.72	□□□□□ -1.65
FAT1	YBR041W	FPR3	P38911	411 aa	Known RBP	4.72	□□□□□ -1.65
FAT1	YBR041W	RTT109	Q07794	436 aa		4.72	□□□□□ -1.65
FAT1	YBR041W	RAD2	P07276	1031 aa		4.72	□□□□□ -1.65
FAT1	YBR041W	OPY1	P38271	328 aa		4.72	□□□□□ -1.65
FAT1	YBR041W	PTP3	P40048	928 aa		4.72	□□□□□ -1.65
FAT1	YBR041W	YMR196W	Q04336	1088 aa		4.72	□□□□□ -1.65
FAT1	YBR041W	EDE1	P34216	1381 aa		4.71	□□□□□ -1.66
FAT1	YBR041W	RPS24A	P0CX31	135 aa	Known RBP	4.7	□□□□□ -1.66
FAT1	YBR041W	RPS24B	P0CX32	135 aa	Known RBP	4.7	□□□□□ -1.66
FAT1	YBR041W	SIS1	P25294	352 aa	Known RBP	4.7	□□□□□ -1.66
FAT1	YBR041W	IME2	P32581	645 aa		4.7	□□□□□ -1.66
FAT1	YBR041W	CSE4	P36012	229 aa		4.7	□□□□□ -1.66
FAT1	YBR041W	POL32	P47110	350 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms