RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-222ENST00000641321 ERBB3P21860 1342 aa13.79□□□□□ -0.2
CASC19-222ENST00000641321 NISCHQ9Y2I1 1504 aa13.79□□□□□ -0.2
CASC19-222ENST00000641321 NLRP6P59044 892 aa13.77□□□□□ -0.21
CASC19-222ENST00000641321 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
CASC19-222ENST00000641321 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
CASC19-222ENST00000641321 GPR153Q6NV75 609 aa13.72□□□□□ -0.21
CASC19-222ENST00000641321 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
CASC19-222ENST00000641321 MFRPQ9BY79 579 aa13.69□□□□□ -0.22
CASC19-222ENST00000641321 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
CASC19-222ENST00000641321 STK25O00506 426 aa13.66□□□□□ -0.22
CASC19-222ENST00000641321 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
CASC19-222ENST00000641321 ZNF687Q8N1G0 1237 aa13.64□□□□□ -0.23
CASC19-222ENST00000641321 PKD2Q13563 968 aa13.61□□□□□ -0.23
CASC19-222ENST00000641321 KIF3CO14782 793 aa13.6□□□□□ -0.23
CASC19-222ENST00000641321 ARSIQ5FYB1 569 aa13.6□□□□□ -0.23
CASC19-222ENST00000641321 RGL2O15211 777 aa13.58□□□□□ -0.24
CASC19-222ENST00000641321 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
CASC19-222ENST00000641321 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
CASC19-222ENST00000641321 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.252e-6■□□□□ 9.6
CASC19-222ENST00000641321 RNF166Q96A37 237 aaPredicted RBP13.5□□□□□ -0.25
CASC19-222ENST00000641321 SLC34A2O95436 690 aa13.49□□□□□ -0.25
CASC19-222ENST00000641321 PTGER2P43116 358 aa13.48□□□□□ -0.25
CASC19-222ENST00000641321 TMC2Q8TDI7 906 aa13.48□□□□□ -0.25
CASC19-222ENST00000641321 MYT1LQ9UL68 1186 aa13.47□□□□□ -0.25
CASC19-222ENST00000641321 PPP1R37O75864 691 aa13.42□□□□□ -0.26
CASC19-222ENST00000641321 NUDT7P0C024 238 aa13.42□□□□□ -0.26
CASC19-222ENST00000641321 PCDHGA4Q9Y5G9 962 aa13.41□□□□□ -0.26
CASC19-222ENST00000641321 ANKRD13DQ6ZTN6 518 aa13.4□□□□□ -0.26
CASC19-222ENST00000641321 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
CASC19-222ENST00000641321 PBX2P40425 430 aa13.37□□□□□ -0.27
CASC19-222ENST00000641321 LHX6Q9UPM6 363 aa13.36□□□□□ -0.27
CASC19-222ENST00000641321 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
CASC19-222ENST00000641321 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
CASC19-222ENST00000641321 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
CASC19-222ENST00000641321 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
CASC19-222ENST00000641321 PTCD2Q8WV60 388 aaKnown RBP13.29□□□□□ -0.28
CASC19-222ENST00000641321 FOXK1P85037 733 aa13.28□□□□□ -0.28
CASC19-222ENST00000641321 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
CASC19-222ENST00000641321 AXIN2Q9Y2T1 843 aa13.26□□□□□ -0.29
CASC19-222ENST00000641321 PLPP6Q8IY26 295 aa13.23□□□□□ -0.29
CASC19-222ENST00000641321 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
CASC19-222ENST00000641321 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
CASC19-222ENST00000641321 TBC1D12O60347 775 aa13.21□□□□□ -0.29
CASC19-222ENST00000641321 RYDENQ9NUL5 291 aaKnown RBP13.2□□□□□ -0.3
CASC19-222ENST00000641321 DSG2Q14126 1118 aa13.19□□□□□ -0.3
CASC19-222ENST00000641321 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
CASC19-222ENST00000641321 ADGRD1Q6QNK2 874 aa13.16□□□□□ -0.3
CASC19-222ENST00000641321 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
CASC19-222ENST00000641321 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
CASC19-222ENST00000641321 TK2O00142 265 aa13.14□□□□□ -0.31
CASC19-222ENST00000641321 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
CASC19-222ENST00000641321 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
CASC19-222ENST00000641321 HRO43593 1189 aa13.09□□□□□ -0.31
CASC19-222ENST00000641321 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
CASC19-222ENST00000641321 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
CASC19-222ENST00000641321 ABCC9O60706 1549 aa13.08□□□□□ -0.31
CASC19-222ENST00000641321 PSEN2P49810 448 aa13.08□□□□□ -0.32
CASC19-222ENST00000641321 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
CASC19-222ENST00000641321 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.32
CASC19-222ENST00000641321 PPP1R15BQ5SWA1 713 aa13□□□□□ -0.33
CASC19-222ENST00000641321 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
CASC19-222ENST00000641321 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
CASC19-222ENST00000641321 KCNK17Q96T54 332 aa12.99□□□□□ -0.33
CASC19-222ENST00000641321 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
CASC19-222ENST00000641321 PDE4AP27815 886 aa12.97□□□□□ -0.33
CASC19-222ENST00000641321 ZNF454Q8N9F8 522 aa12.95□□□□□ -0.34
CASC19-222ENST00000641321 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
CASC19-222ENST00000641321 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
CASC19-222ENST00000641321 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
CASC19-222ENST00000641321 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
CASC19-222ENST00000641321 VPS9D1Q9Y2B5 631 aa12.94□□□□□ -0.34
CASC19-222ENST00000641321 FOSBP53539 338 aa12.93□□□□□ -0.34
CASC19-222ENST00000641321 KCTD12Q96CX2 325 aaKnown RBP12.93□□□□□ -0.34
CASC19-222ENST00000641321 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
CASC19-222ENST00000641321 PTPREP23469 700 aa12.88□□□□□ -0.35
CASC19-222ENST00000641321 JPH4Q96JJ6 628 aa12.87□□□□□ -0.35
CASC19-222ENST00000641321 LARP6Q9BRS8 491 aaKnown RBP12.86□□□□□ -0.35
CASC19-222ENST00000641321 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
CASC19-222ENST00000641321 BHMG1C9JSJ3 638 aaPredicted RBP12.85□□□□□ -0.35
CASC19-222ENST00000641321 EVI5O60447 810 aa12.85□□□□□ -0.35
CASC19-222ENST00000641321 MFSD10Q14728 455 aa12.85□□□□□ -0.35
CASC19-222ENST00000641321 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
CASC19-222ENST00000641321 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
CASC19-222ENST00000641321 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
CASC19-222ENST00000641321 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
CASC19-222ENST00000641321 PTPN5P54829 565 aa12.8□□□□□ -0.36
CASC19-222ENST00000641321 ADAM33Q9BZ11 813 aa12.8□□□□□ -0.36
CASC19-222ENST00000641321 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
CASC19-222ENST00000641321 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
CASC19-222ENST00000641321 NBPF3Q9H094 633 aa12.78□□□□□ -0.36
CASC19-222ENST00000641321 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
CASC19-222ENST00000641321 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
CASC19-222ENST00000641321 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
CASC19-222ENST00000641321 WNT2BQ93097 391 aa12.74□□□□□ -0.37
CASC19-222ENST00000641321 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
CASC19-222ENST00000641321 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
CASC19-222ENST00000641321 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
CASC19-222ENST00000641321 PHF14O94880 888 aa12.67□□□□□ -0.38
CASC19-222ENST00000641321 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
CASC19-222ENST00000641321 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms