RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 KTN1Q86UP2 1357 aaKnown RBP15.31■□□□□ 0.04
MACF1-235ENST00000641104 ERICH6BQ5W0A0 696 aa15.31■□□□□ 0.04
MACF1-235ENST00000641104 NOP58Q9Y2X3 529 aaKnown RBP15.31■□□□□ 0.04
MACF1-235ENST00000641104 CFAP44Q96MT7 982 aa15.3■□□□□ 0.04
MACF1-235ENST00000641104 GOLGA6L6A8MZA4 724 aa15.29■□□□□ 0.04
MACF1-235ENST00000641104 NAP1L2Q9ULW6 460 aaPredicted RBP15.29■□□□□ 0.04
MACF1-235ENST00000641104 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
MACF1-235ENST00000641104 HSCBQ8IWL3 235 aa15.29■□□□□ 0.04
MACF1-235ENST00000641104 STK26Q9P289 416 aa15.28■□□□□ 0.04
MACF1-235ENST00000641104 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
MACF1-235ENST00000641104 MCCP23508 829 aa15.28■□□□□ 0.04
MACF1-235ENST00000641104 PLCB2Q00722 1185 aa15.28■□□□□ 0.04
MACF1-235ENST00000641104 EFCAB2Q5VUJ9 269 aa15.28■□□□□ 0.04
MACF1-235ENST00000641104 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
MACF1-235ENST00000641104 FMN1Q68DA7 1419 aa15.28■□□□□ 0.04
MACF1-235ENST00000641104 IPO8O15397 1037 aaKnown RBP15.27■□□□□ 0.03
MACF1-235ENST00000641104 GOLGA6L4A6NEF3 574 aa15.26■□□□□ 0.03
MACF1-235ENST00000641104 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
MACF1-235ENST00000641104 CALD1Q05682 793 aaKnown RBP15.25■□□□□ 0.03
MACF1-235ENST00000641104 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
MACF1-235ENST00000641104 NRDCO43847 1150 aa15.25■□□□□ 0.03
MACF1-235ENST00000641104 KANK4Q5T7N3 995 aaPredicted RBP15.25■□□□□ 0.03
MACF1-235ENST00000641104 ROCK2O75116 1388 aaKnown RBP15.25■□□□□ 0.03
MACF1-235ENST00000641104 NUP155O75694 1391 aa15.25■□□□□ 0.03
MACF1-235ENST00000641104 MPHOSPH9Q99550 1183 aa15.24■□□□□ 0.03
MACF1-235ENST00000641104 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
MACF1-235ENST00000641104 FOXD1Q16676 465 aa15.24■□□□□ 0.03
MACF1-235ENST00000641104 RALBP1Q15311 655 aa15.23■□□□□ 0.03
MACF1-235ENST00000641104 U2AF1L5P0DN76 240 aaPredicted RBP15.21■□□□□ 0.03
MACF1-235ENST00000641104 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.03
MACF1-235ENST00000641104 TDRD9Q8NDG6 1382 aaKnown RBP15.21■□□□□ 0.03
MACF1-235ENST00000641104 EIF3AQ14152 1382 aaKnown RBP15.21■□□□□ 0.02
MACF1-235ENST00000641104 RAB3GAP2Q9H2M9 1393 aa15.2■□□□□ 0.02
MACF1-235ENST00000641104 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
MACF1-235ENST00000641104 CHMP4AQ9BY43 222 aa15.19■□□□□ 0.02
MACF1-235ENST00000641104 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
MACF1-235ENST00000641104 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
MACF1-235ENST00000641104 NAP1L5Q96NT1 182 aaPredicted RBP15.17■□□□□ 0.02
MACF1-235ENST00000641104 CSB-PGBD3P0DP91 1061 aa15.17■□□□□ 0.02
MACF1-235ENST00000641104 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
MACF1-235ENST00000641104 RCAN3Q9UKA8 241 aa15.16■□□□□ 0.02
MACF1-235ENST00000641104 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
MACF1-235ENST00000641104 KIF3BO15066 747 aa15.16■□□□□ 0.02
MACF1-235ENST00000641104 RSPH4AQ5TD94 716 aa15.16■□□□□ 0.02
MACF1-235ENST00000641104 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
MACF1-235ENST00000641104 APBB1O00213 710 aa15.14■□□□□ 0.01
MACF1-235ENST00000641104 ITPRIPQ8IWB1 547 aa15.14■□□□□ 0.01
MACF1-235ENST00000641104 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
MACF1-235ENST00000641104 L1TD1Q5T7N2 865 aaKnown RBP15.13■□□□□ 0.01
MACF1-235ENST00000641104 STK31Q9BXU1 1019 aa15.12■□□□□ 0.01
MACF1-235ENST00000641104 GNL2Q13823 731 aaKnown RBP15.11■□□□□ 0.01
MACF1-235ENST00000641104 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
MACF1-235ENST00000641104 HNRNPMP52272 730 aaKnown RBP eCLIP15.11■□□□□ 0.01
MACF1-235ENST00000641104 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
MACF1-235ENST00000641104 EID1Q9Y6B2 187 aa15.1■□□□□ 0.01
MACF1-235ENST00000641104 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
MACF1-235ENST00000641104 HDAC5Q9UQL6 1122 aa15.1■□□□□ 0.01
MACF1-235ENST00000641104 CCDC18Q5T9S5 1454 aa15.1■□□□□ 0.01
MACF1-235ENST00000641104 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
MACF1-235ENST00000641104 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
MACF1-235ENST00000641104 ZNF330Q9Y3S2 320 aaPredicted RBP15.09■□□□□ 0.01
MACF1-235ENST00000641104 PTMSP20962 102 aa15.08■□□□□ 0.01
MACF1-235ENST00000641104 L3MBTL2Q969R5 705 aa15.08■□□□□ 0.01
MACF1-235ENST00000641104 WASHC2CQ9Y4E1 1318 aa15.08■□□□□ 0
MACF1-235ENST00000641104 TCERG1O14776 1098 aaKnown RBP15.08■□□□□ 0
MACF1-235ENST00000641104 MSNP26038 577 aaKnown RBP15.08■□□□□ 0
MACF1-235ENST00000641104 GBP4Q96PP9 640 aa15.07■□□□□ 0
MACF1-235ENST00000641104 DRC7Q8IY82 874 aa15.07■□□□□ 0
MACF1-235ENST00000641104 SMC4Q9NTJ3 1288 aa15.07■□□□□ 0
MACF1-235ENST00000641104 NLRP13Q86W25 1043 aa15.06■□□□□ 0
MACF1-235ENST00000641104 FHOD3Q2V2M9 1422 aa15.06■□□□□ 0
MACF1-235ENST00000641104 HMMRO75330 724 aa15.06■□□□□ 0
MACF1-235ENST00000641104 CADPSQ9ULU8 1353 aa15.06■□□□□ 0
MACF1-235ENST00000641104 LMOD3Q0VAK6 560 aa15.06■□□□□ 0
MACF1-235ENST00000641104 RTN4Q9NQC3 1192 aaKnown RBP15.05■□□□□ 0
MACF1-235ENST00000641104 NGDNQ8NEJ9 315 aaKnown RBP15.05■□□□□ -0
MACF1-235ENST00000641104 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
MACF1-235ENST00000641104 RBM19Q9Y4C8 960 aaKnown RBP15.05■□□□□ -0
MACF1-235ENST00000641104 GPATCH3Q96I76 525 aa15.05■□□□□ -0
MACF1-235ENST00000641104 HTATSF1O43719 755 aaKnown RBP15.04■□□□□ -0
MACF1-235ENST00000641104 PDE3BQ13370 1112 aa15.04■□□□□ -0
MACF1-235ENST00000641104 GORABQ5T7V8 394 aa15.04■□□□□ -0
MACF1-235ENST00000641104 CLSTN1O94985 981 aa15.03■□□□□ -0
MACF1-235ENST00000641104 JPH4Q96JJ6 628 aa15.02■□□□□ -0
MACF1-235ENST00000641104 TMX4Q9H1E5 349 aaPredicted RBP15.02■□□□□ -0
MACF1-235ENST00000641104 PHLDB1Q86UU1 1377 aa15.02■□□□□ -0
MACF1-235ENST00000641104 AMPHP49418 695 aa15.02□□□□□ -0.01
MACF1-235ENST00000641104 CENPJQ9HC77 1338 aaPredicted RBP15.01□□□□□ -0.01
MACF1-235ENST00000641104 TAF7LQ5H9L4 462 aa15.01□□□□□ -0.01
MACF1-235ENST00000641104 NUTM2DQ5VT03 806 aaPredicted RBP15.01□□□□□ -0.01
MACF1-235ENST00000641104 CHMP3Q9Y3E7 222 aa15□□□□□ -0.01
MACF1-235ENST00000641104 CCDC146Q8IYE0 955 aa15□□□□□ -0.01
MACF1-235ENST00000641104 CCDC9Q9Y3X0 531 aaKnown RBP14.99□□□□□ -0.01
MACF1-235ENST00000641104 TRIM6-TRIM34B2RNG4 842 aa14.99□□□□□ -0.01
MACF1-235ENST00000641104 SYAP1Q96A49 352 aaPredicted RBP14.99□□□□□ -0.01
MACF1-235ENST00000641104 SLC4A10Q6U841 1118 aa14.98□□□□□ -0.01
MACF1-235ENST00000641104 KIF15Q9NS87 1388 aa14.98□□□□□ -0.01
MACF1-235ENST00000641104 MFAP1P55081 439 aaKnown RBP14.98□□□□□ -0.01
MACF1-235ENST00000641104 TRAK1Q9UPV9 953 aa14.98□□□□□ -0.01
MACF1-235ENST00000641104 CCDC144AA2RUR9 1427 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms