RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 ABCC5O15440 1437 aa25.28■■□□□ 1.64
PHGDH-208ENST00000641023 ZNF777Q9ULD5 760 aaPredicted RBP25.28■■□□□ 1.64
PHGDH-208ENST00000641023 ROCK1Q13464 1354 aa25.27■■□□□ 1.64
PHGDH-208ENST00000641023 GCC2Q8IWJ2 1684 aa25.24■■□□□ 1.63
PHGDH-208ENST00000641023 CDC42BPAQ5VT25 1732 aa25.24■■□□□ 1.63
PHGDH-208ENST00000641023 KDM5BQ9UGL1 1544 aa25.22■■□□□ 1.63
PHGDH-208ENST00000641023 ACIN1Q9UKV3 1341 aaKnown RBP25.21■■□□□ 1.63
PHGDH-208ENST00000641023 ZCCHC11Q5TAX3 1644 aaKnown RBP25.17■■□□□ 1.62
PHGDH-208ENST00000641023 ZNF316A6NFI3 1004 aaPredicted RBP25.16■■□□□ 1.62
PHGDH-208ENST00000641023 PREX2Q70Z35 1606 aa25.12■■□□□ 1.61
PHGDH-208ENST00000641023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.12■■□□□ 1.616e-6■■■■■ 38.2
PHGDH-208ENST00000641023 KCNH8Q96L42 1107 aa25.12■■□□□ 1.61
PHGDH-208ENST00000641023 TIMELESSQ9UNS1 1208 aa25.12■■□□□ 1.61
PHGDH-208ENST00000641023 TRIM52Q96A61 297 aa25.11■■□□□ 1.61
PHGDH-208ENST00000641023 NCOA1Q15788 1441 aa25.1■■□□□ 1.61
PHGDH-208ENST00000641023 SIN3AQ96ST3 1273 aa25.1■■□□□ 1.61
PHGDH-208ENST00000641023 ADGRL2O95490 1459 aa25.1■■□□□ 1.61
PHGDH-208ENST00000641023 CROCC2H7BZ55 1655 aa25.09■■□□□ 1.61
PHGDH-208ENST00000641023 TSPY4P0CV99 314 aa25.09■■□□□ 1.61
PHGDH-208ENST00000641023 TSPY10P0CW01 314 aa25.09■■□□□ 1.61
PHGDH-208ENST00000641023 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
PHGDH-208ENST00000641023 CDC42BPBQ9Y5S2 1711 aa25.09■■□□□ 1.61
PHGDH-208ENST00000641023 ANKRD30AQ9BXX3 1397 aa25.09■■□□□ 1.61
PHGDH-208ENST00000641023 TTC37Q6PGP7 1564 aa25.08■■□□□ 1.61
PHGDH-208ENST00000641023 RSPH4AQ5TD94 716 aa25.08■■□□□ 1.61
PHGDH-208ENST00000641023 KDM6BO15054 1643 aa25.08■■□□□ 1.61
PHGDH-208ENST00000641023 ADGBQ8N7X0 1667 aa25.08■■□□□ 1.61
PHGDH-208ENST00000641023 SHANK2Q9UPX8 1470 aa25.07■■□□□ 1.6
PHGDH-208ENST00000641023 ARHGEF5Q12774 1597 aa25.05■■□□□ 1.6
PHGDH-208ENST00000641023 ARHGAP5Q13017 1502 aa25.05■■□□□ 1.6
PHGDH-208ENST00000641023 HNRNPMP52272 730 aaKnown RBP eCLIP25.05■■□□□ 1.61e-6■■■■□ 22.8
PHGDH-208ENST00000641023 SAMD9LQ8IVG5 1584 aa25.04■■□□□ 1.6
PHGDH-208ENST00000641023 MBD5Q9P267 1494 aa25.03■■□□□ 1.6
PHGDH-208ENST00000641023 MYO5CQ9NQX4 1742 aa25.03■■□□□ 1.6
PHGDH-208ENST00000641023 C9orf84Q5VXU9 1444 aa25.03■■□□□ 1.6
PHGDH-208ENST00000641023 MPHOSPH9Q99550 1183 aa25.01■■□□□ 1.59
PHGDH-208ENST00000641023 PLCH2O75038 1416 aa25■■□□□ 1.59
PHGDH-208ENST00000641023 CCDC141Q6ZP82 1450 aa25■■□□□ 1.59
PHGDH-208ENST00000641023 PLEKHH2Q8IVE3 1493 aa25■■□□□ 1.59
PHGDH-208ENST00000641023 WDR7Q9Y4E6 1490 aa24.98■■□□□ 1.59
PHGDH-208ENST00000641023 DIEXFQ68CQ4 756 aaKnown RBP24.98■■□□□ 1.59
PHGDH-208ENST00000641023 KIAA1107Q9UPP5 1409 aa24.97■■□□□ 1.59
PHGDH-208ENST00000641023 EFCAB2Q5VUJ9 269 aa24.97■■□□□ 1.59
PHGDH-208ENST00000641023 ANKRD50Q9ULJ7 1429 aa24.95■■□□□ 1.59
PHGDH-208ENST00000641023 NPM1P06748 294 aaKnown RBP eCLIP24.95■■□□□ 1.59
PHGDH-208ENST00000641023 TONSLQ96HA7 1378 aa24.94■■□□□ 1.58
PHGDH-208ENST00000641023 DENND4BO75064 1496 aaPredicted RBP24.94■■□□□ 1.58
PHGDH-208ENST00000641023 SYCP2Q9BX26 1530 aa24.93■■□□□ 1.58
PHGDH-208ENST00000641023 SLC4A1APQ9BWU0 796 aaKnown RBP24.91■■□□□ 1.58
PHGDH-208ENST00000641023 ARAP3Q8WWN8 1544 aa24.9■■□□□ 1.58
PHGDH-208ENST00000641023 ASXL2Q76L83 1435 aa24.89■■□□□ 1.58
PHGDH-208ENST00000641023 KIF15Q9NS87 1388 aa24.89■■□□□ 1.58
PHGDH-208ENST00000641023 PPP1R15AO75807 674 aaPredicted RBP24.89■■□□□ 1.57
PHGDH-208ENST00000641023 MAST1Q9Y2H9 1570 aa24.86■■□□□ 1.57
PHGDH-208ENST00000641023 ABCA9Q8IUA7 1624 aa24.83■■□□□ 1.57
PHGDH-208ENST00000641023 ARHGEF12Q9NZN5 1544 aa24.82■■□□□ 1.56
PHGDH-208ENST00000641023 PZPP20742 1482 aa24.82■■□□□ 1.56
PHGDH-208ENST00000641023 ABCC1P33527 1531 aa24.81■■□□□ 1.56
PHGDH-208ENST00000641023 FOXD1Q16676 465 aa24.81■■□□□ 1.56
PHGDH-208ENST00000641023 ANKRD30BQ9BXX2 1392 aa24.81■■□□□ 1.56
PHGDH-208ENST00000641023 NUP155O75694 1391 aa24.79■■□□□ 1.56
PHGDH-208ENST00000641023 FANCAO15360 1455 aa24.76■■□□□ 1.55
PHGDH-208ENST00000641023 PLXNC1O60486 1568 aa24.76■■□□□ 1.55
PHGDH-208ENST00000641023 KDM5DQ9BY66 1539 aa24.74■■□□□ 1.55
PHGDH-208ENST00000641023 TRAPPC8Q9Y2L5 1435 aa24.73■■□□□ 1.55
PHGDH-208ENST00000641023 PKD2Q13563 968 aa24.73■■□□□ 1.55
PHGDH-208ENST00000641023 RPRD2Q5VT52 1461 aaKnown RBP24.72■■□□□ 1.55
PHGDH-208ENST00000641023 DUOX2Q9NRD8 1548 aa24.7■■□□□ 1.54
PHGDH-208ENST00000641023 SPAG9O60271 1321 aaKnown RBP24.69■■□□□ 1.54
PHGDH-208ENST00000641023 RTEL1-TNFRSF6BF6WH68 1400 aa24.69■■□□□ 1.54
PHGDH-208ENST00000641023 AFAP1Q8N556 730 aa24.68■■□□□ 1.54
PHGDH-208ENST00000641023 ADGRL1O94910 1474 aa24.67■■□□□ 1.54
PHGDH-208ENST00000641023 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
PHGDH-208ENST00000641023 ERBINQ96RT1 1412 aa24.66■■□□□ 1.54
PHGDH-208ENST00000641023 L3MBTL2Q969R5 705 aa24.65■■□□□ 1.54
PHGDH-208ENST00000641023 CD109Q6YHK3 1445 aa24.64■■□□□ 1.54
PHGDH-208ENST00000641023 SCAPERQ9BY12 1400 aa24.64■■□□□ 1.54
PHGDH-208ENST00000641023 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
PHGDH-208ENST00000641023 UNC13BO14795 1591 aa24.61■■□□□ 1.53
PHGDH-208ENST00000641023 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
PHGDH-208ENST00000641023 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
PHGDH-208ENST00000641023 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
PHGDH-208ENST00000641023 ZFYVE16Q7Z3T8 1539 aa24.6■■□□□ 1.53
PHGDH-208ENST00000641023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.57■■□□□ 1.525e-16■■□□□ 13.6
PHGDH-208ENST00000641023 TEX14Q8IWB6 1497 aa24.57■■□□□ 1.52
PHGDH-208ENST00000641023 CFAP74Q9C0B2 1584 aa24.57■■□□□ 1.52
PHGDH-208ENST00000641023 ATP7AQ04656 1500 aa24.55■■□□□ 1.52
PHGDH-208ENST00000641023 MYT1LQ9UL68 1186 aa24.55■■□□□ 1.52
PHGDH-208ENST00000641023 INO80Q9ULG1 1556 aaPredicted RBP24.54■■□□□ 1.52
PHGDH-208ENST00000641023 MAGI2Q86UL8 1455 aa24.53■■□□□ 1.52
PHGDH-208ENST00000641023 ZNF518AQ6AHZ1 1483 aa24.53■■□□□ 1.52
PHGDH-208ENST00000641023 IQGAP3Q86VI3 1631 aa24.52■■□□□ 1.52
PHGDH-208ENST00000641023 MIER1Q8N108 512 aa24.51■■□□□ 1.51
PHGDH-208ENST00000641023 NEO1Q92859 1461 aa24.48■■□□□ 1.51
PHGDH-208ENST00000641023 HIRIP3Q9BW71 556 aaPredicted RBP24.47■■□□□ 1.51
PHGDH-208ENST00000641023 DHX29Q7Z478 1369 aaKnown RBP24.45■■□□□ 1.51
PHGDH-208ENST00000641023 POGZQ7Z3K3 1410 aa24.45■■□□□ 1.5
PHGDH-208ENST00000641023 NBPF8Q3BBV2 869 aa24.44■■□□□ 1.5
PHGDH-208ENST00000641023 CCDC144AA2RUR9 1427 aa24.43■■□□□ 1.5
PHGDH-208ENST00000641023 EIF4G2P78344 907 aaKnown RBP eCLIP24.43■■□□□ 1.57e-14■■■■■ 63.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms