RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 ZNF777Q9ULD5 760 aaPredicted RBP31.52■■■□□ 2.64
SPIN3-244ENST00000640728 AKNAQ7Z591 1439 aa31.51■■■□□ 2.64
SPIN3-244ENST00000640728 DNMT1P26358 1616 aaKnown RBP31.51■■■□□ 2.63
SPIN3-244ENST00000640728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.47■■■□□ 2.63
SPIN3-244ENST00000640728 RRP7BPQ9NSQ0 103 aa31.47■■■□□ 2.63
SPIN3-244ENST00000640728 KCNH8Q96L42 1107 aa31.47■■■□□ 2.63
SPIN3-244ENST00000640728 ROCK1Q13464 1354 aa31.46■■■□□ 2.63
SPIN3-244ENST00000640728 TTC37Q6PGP7 1564 aa31.42■■■□□ 2.62
SPIN3-244ENST00000640728 PREX2Q70Z35 1606 aa31.4■■■□□ 2.62
SPIN3-244ENST00000640728 CDC42BPBQ9Y5S2 1711 aa31.36■■■□□ 2.61
SPIN3-244ENST00000640728 GCC2Q8IWJ2 1684 aa31.36■■■□□ 2.61
SPIN3-244ENST00000640728 WDR7Q9Y4E6 1490 aa31.36■■■□□ 2.61
SPIN3-244ENST00000640728 MAPKBP1O60336 1514 aa31.35■■■□□ 2.61
SPIN3-244ENST00000640728 PLCH2O75038 1416 aa31.32■■■□□ 2.6
SPIN3-244ENST00000640728 MBD5Q9P267 1494 aa31.31■■■□□ 2.6
SPIN3-244ENST00000640728 ARHGAP5Q13017 1502 aa31.3■■■□□ 2.6
SPIN3-244ENST00000640728 SAMD9LQ8IVG5 1584 aa31.3■■■□□ 2.6
SPIN3-244ENST00000640728 NPM1P06748 294 aaKnown RBP eCLIP31.3■■■□□ 2.6
SPIN3-244ENST00000640728 NCOA1Q15788 1441 aa31.3■■■□□ 2.6
SPIN3-244ENST00000640728 ADGRL2O95490 1459 aa31.3■■■□□ 2.6
SPIN3-244ENST00000640728 HNRNPMP52272 730 aaKnown RBP eCLIP31.3■■■□□ 2.6
SPIN3-244ENST00000640728 ASXL2Q76L83 1435 aa31.29■■■□□ 2.6
SPIN3-244ENST00000640728 ARHGEF5Q12774 1597 aa31.28■■■□□ 2.6
SPIN3-244ENST00000640728 RSPH4AQ5TD94 716 aa31.28■■■□□ 2.6
SPIN3-244ENST00000640728 SHANK2Q9UPX8 1470 aa31.28■■■□□ 2.6
SPIN3-244ENST00000640728 MYO5CQ9NQX4 1742 aa31.27■■■□□ 2.6
SPIN3-244ENST00000640728 CROCC2H7BZ55 1655 aa31.27■■■□□ 2.6
SPIN3-244ENST00000640728 KDM6BO15054 1643 aa31.25■■■□□ 2.59
SPIN3-244ENST00000640728 ANKRD30AQ9BXX3 1397 aa31.24■■■□□ 2.59
SPIN3-244ENST00000640728 TSPY4P0CV99 314 aa31.24■■■□□ 2.59
SPIN3-244ENST00000640728 TSPY10P0CW01 314 aa31.24■■■□□ 2.59
SPIN3-244ENST00000640728 ACIN1Q9UKV3 1341 aaKnown RBP31.23■■■□□ 2.59
SPIN3-244ENST00000640728 EFCAB2Q5VUJ9 269 aa31.23■■■□□ 2.59
SPIN3-244ENST00000640728 KIAA1107Q9UPP5 1409 aa31.23■■■□□ 2.59
SPIN3-244ENST00000640728 C9orf84Q5VXU9 1444 aa31.23■■■□□ 2.59
SPIN3-244ENST00000640728 PLEKHH2Q8IVE3 1493 aa31.22■■■□□ 2.59
SPIN3-244ENST00000640728 ADGBQ8N7X0 1667 aa31.2■■■□□ 2.59
SPIN3-244ENST00000640728 CCDC141Q6ZP82 1450 aa31.2■■■□□ 2.59
SPIN3-244ENST00000640728 ARAP3Q8WWN8 1544 aa31.18■■■□□ 2.58
SPIN3-244ENST00000640728 SYCP2Q9BX26 1530 aa31.16■■■□□ 2.58
SPIN3-244ENST00000640728 TRIM52Q96A61 297 aa31.16■■■□□ 2.58
SPIN3-244ENST00000640728 ABCA9Q8IUA7 1624 aa31.15■■■□□ 2.58
SPIN3-244ENST00000640728 CYB5RLQ6IPT4 315 aa31.12■■■□□ 2.57
SPIN3-244ENST00000640728 RIMBP3CA6NJZ7 1639 aa31.12■■■□□ 2.57
SPIN3-244ENST00000640728 RIMBP3BA6NNM3 1639 aa31.12■■■□□ 2.57
SPIN3-244ENST00000640728 RIMBP3Q9UFD9 1639 aa31.12■■■□□ 2.57
SPIN3-244ENST00000640728 ARHGEF12Q9NZN5 1544 aa31.12■■■□□ 2.57
SPIN3-244ENST00000640728 SIN3AQ96ST3 1273 aa31.11■■■□□ 2.57
SPIN3-244ENST00000640728 ANKRD50Q9ULJ7 1429 aa31.08■■■□□ 2.57
SPIN3-244ENST00000640728 MPHOSPH9Q99550 1183 aa31.08■■■□□ 2.57
SPIN3-244ENST00000640728 DENND4BO75064 1496 aaPredicted RBP31.06■■■□□ 2.56
SPIN3-244ENST00000640728 ABCC1P33527 1531 aa31.06■■■□□ 2.56
SPIN3-244ENST00000640728 MAST1Q9Y2H9 1570 aa31.05■■■□□ 2.56
SPIN3-244ENST00000640728 KIF15Q9NS87 1388 aa31.05■■■□□ 2.56
SPIN3-244ENST00000640728 NEUROD1Q13562 356 aa31.03■■■□□ 2.56
SPIN3-244ENST00000640728 TIMELESSQ9UNS1 1208 aa31.03■■■□□ 2.56
SPIN3-244ENST00000640728 FANCAO15360 1455 aa31.02■■■□□ 2.56
SPIN3-244ENST00000640728 TRAPPC8Q9Y2L5 1435 aa30.99■■■□□ 2.55
SPIN3-244ENST00000640728 CD109Q6YHK3 1445 aa30.94■■■□□ 2.54
SPIN3-244ENST00000640728 SLC4A1APQ9BWU0 796 aaKnown RBP30.94■■■□□ 2.54
SPIN3-244ENST00000640728 PZPP20742 1482 aa30.93■■■□□ 2.54
SPIN3-244ENST00000640728 PLXNC1O60486 1568 aa30.91■■■□□ 2.54
SPIN3-244ENST00000640728 AFAP1Q8N556 730 aa30.91■■■□□ 2.54
SPIN3-244ENST00000640728 ADGRL1O94910 1474 aa30.89■■■□□ 2.54
SPIN3-244ENST00000640728 ZNF316A6NFI3 1004 aaPredicted RBP30.88■■■□□ 2.53
SPIN3-244ENST00000640728 RTEL1-TNFRSF6BF6WH68 1400 aa30.88■■■□□ 2.53
SPIN3-244ENST00000640728 SCAPERQ9BY12 1400 aa30.88■■■□□ 2.53
SPIN3-244ENST00000640728 SPAG9O60271 1321 aaKnown RBP30.87■■■□□ 2.53
SPIN3-244ENST00000640728 FOXD1Q16676 465 aa30.86■■■□□ 2.53
SPIN3-244ENST00000640728 NUP155O75694 1391 aa30.85■■■□□ 2.53
SPIN3-244ENST00000640728 ANKRD30BQ9BXX2 1392 aa30.85■■■□□ 2.53
SPIN3-244ENST00000640728 KDM5DQ9BY66 1539 aa30.82■■■□□ 2.53
SPIN3-244ENST00000640728 DUOX2Q9NRD8 1548 aa30.82■■■□□ 2.53
SPIN3-244ENST00000640728 TONSLQ96HA7 1378 aa30.82■■■□□ 2.52
SPIN3-244ENST00000640728 PPP1R15AO75807 674 aaPredicted RBP30.81■■■□□ 2.52
SPIN3-244ENST00000640728 ZFYVE16Q7Z3T8 1539 aa30.78■■■□□ 2.52
SPIN3-244ENST00000640728 ERBINQ96RT1 1412 aa30.78■■■□□ 2.52
SPIN3-244ENST00000640728 PKD2Q13563 968 aa30.77■■■□□ 2.52
SPIN3-244ENST00000640728 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.51
SPIN3-244ENST00000640728 GLI2P10070 1586 aa30.75■■■□□ 2.51
SPIN3-244ENST00000640728 NEO1Q92859 1461 aa30.73■■■□□ 2.51
SPIN3-244ENST00000640728 INO80Q9ULG1 1556 aaPredicted RBP30.71■■■□□ 2.51
SPIN3-244ENST00000640728 ATP7AQ04656 1500 aa30.71■■■□□ 2.51
SPIN3-244ENST00000640728 ZNF518AQ6AHZ1 1483 aa30.7■■■□□ 2.51
SPIN3-244ENST00000640728 UNC13BO14795 1591 aa30.7■■■□□ 2.5
SPIN3-244ENST00000640728 RPRD2Q5VT52 1461 aaKnown RBP30.69■■■□□ 2.5
SPIN3-244ENST00000640728 MAP3K4Q9Y6R4 1608 aa30.69■■■□□ 2.5
SPIN3-244ENST00000640728 FAM135AQ9P2D6 1515 aa30.67■■■□□ 2.5
SPIN3-244ENST00000640728 POGZQ7Z3K3 1410 aa30.67■■■□□ 2.5
SPIN3-244ENST00000640728 FAM69CQ0P6D2 419 aa30.66■■■□□ 2.5
SPIN3-244ENST00000640728 MAGI2Q86UL8 1455 aa30.64■■■□□ 2.49
SPIN3-244ENST00000640728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.63■■■□□ 2.49
SPIN3-244ENST00000640728 MYT1LQ9UL68 1186 aa30.63■■■□□ 2.49
SPIN3-244ENST00000640728 DIP2BQ9P265 1576 aa30.62■■■□□ 2.49
SPIN3-244ENST00000640728 KDM5CP41229 1560 aa30.61■■■□□ 2.49
SPIN3-244ENST00000640728 DHX29Q7Z478 1369 aaKnown RBP30.6■■■□□ 2.49
SPIN3-244ENST00000640728 L3MBTL2Q969R5 705 aa30.59■■■□□ 2.49
SPIN3-244ENST00000640728 DIEXFQ68CQ4 756 aaKnown RBP30.58■■■□□ 2.49
SPIN3-244ENST00000640728 MLH3Q9UHC1 1453 aa30.58■■■□□ 2.49
SPIN3-244ENST00000640728 IQGAP3Q86VI3 1631 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms