RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 HECW1Q76N89 1606 aa29.91■■■□□ 2.38
VPS72-207ENST00000640458 SCAPERQ9BY12 1400 aa29.88■■■□□ 2.37
VPS72-207ENST00000640458 DISP3Q9P2K9 1392 aa29.86■■■□□ 2.37
VPS72-207ENST00000640458 UBTFP17480 764 aaKnown RBP29.85■■■□□ 2.37
VPS72-207ENST00000640458 CEBPAP49715 358 aaPredicted RBP29.84■■■□□ 2.37
VPS72-207ENST00000640458 ILDR2Q71H61 639 aa29.83■■■□□ 2.37
VPS72-207ENST00000640458 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
VPS72-207ENST00000640458 ATP10AO60312 1499 aa29.81■■■□□ 2.36
VPS72-207ENST00000640458 PLCH2O75038 1416 aa29.8■■■□□ 2.36
VPS72-207ENST00000640458 CDK13Q14004 1512 aaKnown RBP29.8■■■□□ 2.36
VPS72-207ENST00000640458 ARHGEF12Q9NZN5 1544 aa29.8■■■□□ 2.36
VPS72-207ENST00000640458 DMRT2Q9Y5R5 561 aa29.78■■■□□ 2.36
VPS72-207ENST00000640458 PREX1Q8TCU6 1659 aa29.78■■■□□ 2.36
VPS72-207ENST00000640458 C9orf84Q5VXU9 1444 aa29.78■■■□□ 2.36
VPS72-207ENST00000640458 EFCAB2Q5VUJ9 269 aa29.75■■■□□ 2.35
VPS72-207ENST00000640458 SOCS7O14512 581 aa29.74■■■□□ 2.35
VPS72-207ENST00000640458 ATP1B4Q9UN42 357 aaPredicted RBP29.73■■■□□ 2.35
VPS72-207ENST00000640458 MYT1LQ9UL68 1186 aa29.69■■■□□ 2.34
VPS72-207ENST00000640458 STRCQ7RTU9 1775 aa29.69■■■□□ 2.34
VPS72-207ENST00000640458 UHRF1BP1Q6BDS2 1440 aa29.69■■■□□ 2.34
VPS72-207ENST00000640458 AFAP1Q8N556 730 aa29.64■■■□□ 2.34
VPS72-207ENST00000640458 MYO5CQ9NQX4 1742 aa29.63■■■□□ 2.33
VPS72-207ENST00000640458 ZNF518AQ6AHZ1 1483 aa29.61■■■□□ 2.33
VPS72-207ENST00000640458 SETD1BQ9UPS6 1966 aaKnown RBP29.61■■■□□ 2.33
VPS72-207ENST00000640458 CDK11AQ9UQ88 783 aaPredicted RBP29.6■■■□□ 2.33
VPS72-207ENST00000640458 ARHGAP35Q9NRY4 1499 aa29.57■■■□□ 2.32
VPS72-207ENST00000640458 ARHGAP5Q13017 1502 aa29.55■■■□□ 2.32
VPS72-207ENST00000640458 PTPRTO14522 1441 aa29.55■■■□□ 2.32
VPS72-207ENST00000640458 ESF1Q9H501 851 aaKnown RBP29.55■■■□□ 2.32
VPS72-207ENST00000640458 KIF14Q15058 1648 aa29.55■■■□□ 2.32
VPS72-207ENST00000640458 SPATA31D1Q6ZQQ2 1576 aa29.54■■■□□ 2.32
VPS72-207ENST00000640458 KDM5CP41229 1560 aa29.53■■■□□ 2.32
VPS72-207ENST00000640458 FMN1Q68DA7 1419 aa29.52■■■□□ 2.32
VPS72-207ENST00000640458 DIP2CQ9Y2E4 1556 aa29.52■■■□□ 2.32
VPS72-207ENST00000640458 C3P01024 1663 aa29.49■■■□□ 2.31
VPS72-207ENST00000640458 TROQ12816 1431 aaPredicted RBP29.48■■■□□ 2.31
VPS72-207ENST00000640458 TRAPPC8Q9Y2L5 1435 aa29.45■■■□□ 2.31
VPS72-207ENST00000640458 REREQ9P2R6 1566 aa29.45■■■□□ 2.31
VPS72-207ENST00000640458 LTBP4Q8N2S1 1624 aa29.45■■■□□ 2.3
VPS72-207ENST00000640458 CLIP1P30622 1438 aa29.45■■■□□ 2.3
VPS72-207ENST00000640458 ABCA6Q8N139 1617 aa29.44■■■□□ 2.3
VPS72-207ENST00000640458 MLH3Q9UHC1 1453 aa29.42■■■□□ 2.3
VPS72-207ENST00000640458 NCOA1Q15788 1441 aa29.39■■■□□ 2.3
VPS72-207ENST00000640458 AGLP35573 1532 aa29.39■■■□□ 2.3
VPS72-207ENST00000640458 IQSEC2Q5JU85 1478 aa29.37■■■□□ 2.29
VPS72-207ENST00000640458 CDC42BPBQ9Y5S2 1711 aa29.37■■■□□ 2.29
VPS72-207ENST00000640458 CNTLNQ9NXG0 1405 aa29.34■■■□□ 2.29
VPS72-207ENST00000640458 ABCC1P33527 1531 aa29.31■■■□□ 2.28
VPS72-207ENST00000640458 CAMSAP1Q5T5Y3 1602 aa29.31■■■□□ 2.28
VPS72-207ENST00000640458 LRRIQ1Q96JM4 1722 aa29.29■■■□□ 2.28
VPS72-207ENST00000640458 NCKAP5LQ9HCH0 1330 aa29.29■■■□□ 2.28
VPS72-207ENST00000640458 PREX2Q70Z35 1606 aa29.28■■■□□ 2.28
VPS72-207ENST00000640458 UBAP1LF5GYI3 381 aa29.28■■■□□ 2.28
VPS72-207ENST00000640458 ITSN2Q9NZM3 1697 aa29.28■■■□□ 2.28
VPS72-207ENST00000640458 ZNF335Q9H4Z2 1342 aaPredicted RBP29.27■■■□□ 2.28
VPS72-207ENST00000640458 KIDINS220Q9ULH0 1771 aa29.27■■■□□ 2.28
VPS72-207ENST00000640458 NPATQ14207 1427 aa29.25■■■□□ 2.27
VPS72-207ENST00000640458 ZMYM3Q14202 1370 aa29.25■■■□□ 2.27
VPS72-207ENST00000640458 CASKIN1Q8WXD9 1431 aa29.23■■■□□ 2.27
VPS72-207ENST00000640458 LOC105371045A0A1W2PR82 267 aa29.23■■■□□ 2.27
VPS72-207ENST00000640458 ZNF777Q9ULD5 760 aaPredicted RBP29.23■■■□□ 2.27
VPS72-207ENST00000640458 CEP162Q5TB80 1403 aa29.19■■■□□ 2.26
VPS72-207ENST00000640458 MROH2AA6NES4 1674 aa29.18■■■□□ 2.26
VPS72-207ENST00000640458 SAMD9LQ8IVG5 1584 aa29.17■■■□□ 2.26
VPS72-207ENST00000640458 SPAG9O60271 1321 aaKnown RBP29.17■■■□□ 2.26
VPS72-207ENST00000640458 PKD2Q13563 968 aa29.16■■■□□ 2.26
VPS72-207ENST00000640458 CCDC18Q5T9S5 1454 aa29.15■■■□□ 2.26
VPS72-207ENST00000640458 CDC42BPAQ5VT25 1732 aa29.14■■■□□ 2.26
VPS72-207ENST00000640458 SUPT6HQ7KZ85 1726 aaKnown RBP29.14■■■□□ 2.25
VPS72-207ENST00000640458 FYCO1Q9BQS8 1478 aa29.13■■■□□ 2.25
VPS72-207ENST00000640458 HNRNPMP52272 730 aaKnown RBP eCLIP29.13■■■□□ 2.25
VPS72-207ENST00000640458 CLTCQ00610 1675 aaKnown RBP29.1■■■□□ 2.25
VPS72-207ENST00000640458 SYCP2Q9BX26 1530 aa29.1■■■□□ 2.25
VPS72-207ENST00000640458 GGT6Q6P531 493 aa29.09■■■□□ 2.25
VPS72-207ENST00000640458 PLA2R1Q13018 1463 aa29.09■■■□□ 2.25
VPS72-207ENST00000640458 MYO3AQ8NEV4 1616 aa29.08■■■□□ 2.25
VPS72-207ENST00000640458 PPP6R1Q9UPN7 881 aa29.07■■■□□ 2.24
VPS72-207ENST00000640458 PTPRKQ15262 1439 aa29.06■■■□□ 2.24
VPS72-207ENST00000640458 SCAF1Q9H7N4 1312 aaKnown RBP29.06■■■□□ 2.24
VPS72-207ENST00000640458 ZNF142P52746 1687 aaPredicted RBP29.05■■■□□ 2.24
VPS72-207ENST00000640458 CEP170BQ9Y4F5 1589 aaPredicted RBP29.05■■■□□ 2.24
VPS72-207ENST00000640458 TCOF1Q13428 1488 aaKnown RBP29.05■■■□□ 2.24
VPS72-207ENST00000640458 ATP7AQ04656 1500 aa29.04■■■□□ 2.24
VPS72-207ENST00000640458 A2MP01023 1474 aa29.03■■■□□ 2.24
VPS72-207ENST00000640458 GPATCH8Q9UKJ3 1502 aaKnown RBP29.02■■■□□ 2.24
VPS72-207ENST00000640458 HSPA1LP34931 641 aa29■■■□□ 2.23
VPS72-207ENST00000640458 PIP4K2BP78356 416 aa29■■■□□ 2.23
VPS72-207ENST00000640458 CFDP1Q9UEE9 299 aaPredicted RBP28.99■■■□□ 2.23
VPS72-207ENST00000640458 PLXNC1O60486 1568 aa28.98■■■□□ 2.23
VPS72-207ENST00000640458 KIAA1107Q9UPP5 1409 aa28.96■■■□□ 2.23
VPS72-207ENST00000640458 INO80Q9ULG1 1556 aaPredicted RBP28.96■■■□□ 2.23
VPS72-207ENST00000640458 PLEKHH2Q8IVE3 1493 aa28.94■■■□□ 2.22
VPS72-207ENST00000640458 TOM1O60784 492 aa28.93■■■□□ 2.22
VPS72-207ENST00000640458 A2ML1A8K2U0 1454 aa28.92■■■□□ 2.22
VPS72-207ENST00000640458 MED1Q15648 1581 aaPredicted RBP28.92■■■□□ 2.22
VPS72-207ENST00000640458 CCNB3Q8WWL7 1395 aa28.91■■■□□ 2.22
VPS72-207ENST00000640458 DNMT1P26358 1616 aaKnown RBP28.89■■■□□ 2.22
VPS72-207ENST00000640458 VPS8Q8N3P4 1428 aa28.86■■■□□ 2.21
VPS72-207ENST00000640458 ADGBQ8N7X0 1667 aa28.85■■■□□ 2.21
VPS72-207ENST00000640458 FBXO31Q5XUX0 539 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms