RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 TPM3P06753 285 aa6.79□□□□□ -1.32
RTTN-214ENST00000639128 GOLGA6L7A0A1B0GV03 622 aa6.78□□□□□ -1.32
RTTN-214ENST00000639128 PLCD4Q9BRC7 762 aa6.78□□□□□ -1.32
RTTN-214ENST00000639128 ADRA2BP18089 450 aa6.78□□□□□ -1.32
RTTN-214ENST00000639128 HSP90B2PQ58FF3 399 aa6.78□□□□□ -1.32
RTTN-214ENST00000639128 DIAPH3Q9NSV4 1193 aa6.78□□□□□ -1.32
RTTN-214ENST00000639128 GOLGA6L19H0YKK7 550 aa6.77□□□□□ -1.33
RTTN-214ENST00000639128 ITGAEP38570 1179 aa6.77□□□□□ -1.33
RTTN-214ENST00000639128 IRX3P78415 501 aaPredicted RBP6.77□□□□□ -1.33
RTTN-214ENST00000639128 TPRNQ4KMQ1 711 aa6.77□□□□□ -1.33
RTTN-214ENST00000639128 AK7Q96M32 723 aa6.77□□□□□ -1.33
RTTN-214ENST00000639128 GIMAP7Q8NHV1 300 aa6.77□□□□□ -1.33
RTTN-214ENST00000639128 FBXO3Q9UK99 471 aa6.77□□□□□ -1.33
RTTN-214ENST00000639128 ERCC4Q92889 916 aaPredicted RBP6.77□□□□□ -1.33
RTTN-214ENST00000639128 HSP90AB3PQ58FF7 597 aa6.76□□□□□ -1.33
RTTN-214ENST00000639128 ARID3AQ99856 593 aa6.76□□□□□ -1.33
RTTN-214ENST00000639128 GOLGA6L10A0A0M3HER8 536 aa6.76□□□□□ -1.33
RTTN-214ENST00000639128 SKOR2Q2VWA4 1001 aaPredicted RBP6.76□□□□□ -1.33
RTTN-214ENST00000639128 LEKR1Q6ZMV7 388 aa6.76□□□□□ -1.33
RTTN-214ENST00000639128 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
RTTN-214ENST00000639128 MS4A1P11836 297 aa6.75□□□□□ -1.33
RTTN-214ENST00000639128 CLSTN1O94985 981 aa6.75□□□□□ -1.33
RTTN-214ENST00000639128 FAM43AQ8N2R8 423 aa6.75□□□□□ -1.33
RTTN-214ENST00000639128 FAM13BQ9NYF5 915 aa6.75□□□□□ -1.33
RTTN-214ENST00000639128 DDX11L8A8MPP1 907 aa6.75□□□□□ -1.33
RTTN-214ENST00000639128 PDCL2Q8N4E4 241 aa6.74□□□□□ -1.33
RTTN-214ENST00000639128 KIF3AQ9Y496 699 aa6.74□□□□□ -1.33
RTTN-214ENST00000639128 FYB1O15117 783 aa6.74□□□□□ -1.33
RTTN-214ENST00000639128 FAM107BQ9H098 131 aa6.74□□□□□ -1.33
RTTN-214ENST00000639128 GSE1Q14687 1217 aa6.74□□□□□ -1.33
RTTN-214ENST00000639128 CTR9Q6PD62 1173 aa6.73□□□□□ -1.33
RTTN-214ENST00000639128 MNS1Q8NEH6 495 aa6.73□□□□□ -1.33
RTTN-214ENST00000639128 CAVIN1Q6NZI2 390 aaKnown RBP6.73□□□□□ -1.33
RTTN-214ENST00000639128 SENP3Q9H4L4 574 aaPredicted RBP6.73□□□□□ -1.33
RTTN-214ENST00000639128 CALCOCO1Q9P1Z2 691 aa6.73□□□□□ -1.33
RTTN-214ENST00000639128 TMC1Q8TDI8 760 aa6.73□□□□□ -1.33
RTTN-214ENST00000639128 MCCP23508 829 aa6.72□□□□□ -1.33
RTTN-214ENST00000639128 RSPH4AQ5TD94 716 aa6.72□□□□□ -1.33
RTTN-214ENST00000639128 KIAA0754O94854 1291 aa6.71□□□□□ -1.33
RTTN-214ENST00000639128 MIER1Q8N108 512 aa6.71□□□□□ -1.33
RTTN-214ENST00000639128 IPO9Q96P70 1041 aaKnown RBP6.71□□□□□ -1.33
RTTN-214ENST00000639128 CCP110O43303 1012 aa6.71□□□□□ -1.34
RTTN-214ENST00000639128 CEP89Q96ST8 783 aa6.71□□□□□ -1.34
RTTN-214ENST00000639128 RUFY1Q96T51 708 aa6.71□□□□□ -1.34
RTTN-214ENST00000639128 OS9Q13438 667 aaPredicted RBP6.71□□□□□ -1.34
RTTN-214ENST00000639128 FAM50AQ14320 339 aaKnown RBP6.71□□□□□ -1.34
RTTN-214ENST00000639128 TIMELESSQ9UNS1 1208 aa6.71□□□□□ -1.34
RTTN-214ENST00000639128 SUDS3Q9H7L9 328 aaPredicted RBP6.71□□□□□ -1.34
RTTN-214ENST00000639128 DNAJC2Q99543 621 aaKnown RBP6.7□□□□□ -1.34
RTTN-214ENST00000639128 SPATA24Q86W54 205 aa6.7□□□□□ -1.34
RTTN-214ENST00000639128 KIF16BQ96L93 1317 aa6.7□□□□□ -1.34
RTTN-214ENST00000639128 SWAP70Q9UH65 585 aa6.69□□□□□ -1.34
RTTN-214ENST00000639128 BBXQ8WY36 941 aaPredicted RBP6.69□□□□□ -1.34
RTTN-214ENST00000639128 FAM114A1Q8IWE2 563 aa6.69□□□□□ -1.34
RTTN-214ENST00000639128 BCCIPQ9P287 314 aaKnown RBP eCLIP6.69□□□□□ -1.34
RTTN-214ENST00000639128 SUPT16HQ9Y5B9 1047 aaKnown RBP6.69□□□□□ -1.34
RTTN-214ENST00000639128 DHX8Q14562 1220 aaKnown RBP6.69□□□□□ -1.34
RTTN-214ENST00000639128 POLR3GO15318 223 aaPredicted RBP6.68□□□□□ -1.34
RTTN-214ENST00000639128 GBP2P32456 591 aaPredicted RBP6.68□□□□□ -1.34
RTTN-214ENST00000639128 KIAA1328Q86T90 577 aa6.68□□□□□ -1.34
RTTN-214ENST00000639128 PAF1Q8N7H5 531 aa6.68□□□□□ -1.34
RTTN-214ENST00000639128 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.68□□□□□ -1.34
RTTN-214ENST00000639128 FAM9BQ8IZU0 186 aa6.68□□□□□ -1.34
RTTN-214ENST00000639128 TRIM52Q96A61 297 aa6.68□□□□□ -1.34
RTTN-214ENST00000639128 DDX11Q96FC9 970 aa6.68□□□□□ -1.34
RTTN-214ENST00000639128 ISY1Q9ULR0 285 aaKnown RBP6.68□□□□□ -1.34
RTTN-214ENST00000639128 TPM1P09493 284 aa6.68□□□□□ -1.34
RTTN-214ENST00000639128 RASSF8Q8NHQ8 419 aa6.68□□□□□ -1.34
RTTN-214ENST00000639128 MRS2Q9HD23 443 aa6.68□□□□□ -1.34
RTTN-214ENST00000639128 WDR66Q8TBY9 1149 aa6.67□□□□□ -1.34
RTTN-214ENST00000639128 SEPT6Q14141 434 aa6.67□□□□□ -1.34
RTTN-214ENST00000639128 STK31Q9BXU1 1019 aa6.67□□□□□ -1.34
RTTN-214ENST00000639128 TSR1Q2NL82 804 aaKnown RBP6.66□□□□□ -1.34
RTTN-214ENST00000639128 MRVI1Q9Y6F6 885 aa6.66□□□□□ -1.34
RTTN-214ENST00000639128 FANCIQ9NVI1 1328 aa6.66□□□□□ -1.34
RTTN-214ENST00000639128 TDO2P48775 406 aa6.66□□□□□ -1.34
RTTN-214ENST00000639128 HIRIP3Q9BW71 556 aaPredicted RBP6.66□□□□□ -1.34
RTTN-214ENST00000639128 GNL2Q13823 731 aaKnown RBP6.66□□□□□ -1.34
RTTN-214ENST00000639128 MYO6Q9UM54 1294 aa6.66□□□□□ -1.34
RTTN-214ENST00000639128 MPHOSPH10O00566 681 aaKnown RBP6.66□□□□□ -1.34
RTTN-214ENST00000639128 LIG1P18858 919 aa6.66□□□□□ -1.34
RTTN-214ENST00000639128 FAM193AP78312 1265 aa6.66□□□□□ -1.34
RTTN-214ENST00000639128 RNF20Q5VTR2 975 aa6.66□□□□□ -1.34
RTTN-214ENST00000639128 CPSF2Q9P2I0 782 aaKnown RBP6.66□□□□□ -1.34
RTTN-214ENST00000639128 SHTN1A0MZ66 631 aa6.65□□□□□ -1.34
RTTN-214ENST00000639128 SEPT14Q6ZU15 432 aa6.65□□□□□ -1.34
RTTN-214ENST00000639128 CHMP4CQ96CF2 233 aa6.65□□□□□ -1.34
RTTN-214ENST00000639128 IPO7O95373 1038 aaKnown RBP6.65□□□□□ -1.34
RTTN-214ENST00000639128 RALBP1Q15311 655 aa6.65□□□□□ -1.34
RTTN-214ENST00000639128 TTLL5Q6EMB2 1281 aa6.65□□□□□ -1.34
RTTN-214ENST00000639128 ANO8Q9HCE9 1232 aaPredicted RBP6.65□□□□□ -1.34
RTTN-214ENST00000639128 SEPT11Q9NVA2 429 aaKnown RBP6.65□□□□□ -1.34
RTTN-214ENST00000639128 CFAP57Q96MR6 1250 aa6.65□□□□□ -1.35
RTTN-214ENST00000639128 VGFO15240 615 aaPredicted RBP6.64□□□□□ -1.35
RTTN-214ENST00000639128 EIF3JO75822 258 aaKnown RBP6.64□□□□□ -1.35
RTTN-214ENST00000639128 ZNF622Q969S3 477 aaKnown RBP eCLIP6.64□□□□□ -1.35
RTTN-214ENST00000639128 PDCL3Q9H2J4 239 aa6.64□□□□□ -1.35
RTTN-214ENST00000639128 SARNPP82979 210 aaKnown RBP6.64□□□□□ -1.35
RTTN-214ENST00000639128 FGD1P98174 961 aa6.64□□□□□ -1.35
RTTN-214ENST00000639128 WWC1Q8IX03 1113 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms