RNA–Protein interactions for RNA: ENST00000637887.1

ARID1B-231, Transcript of AT-rich interaction domain 1B, human

TSL 5

Gene ARID1B, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1B-231	ENST00000637887	ZNF710	Q8N1W2	664 aa		14.07	□□□□□ -0.16
ARID1B-231	ENST00000637887	C2orf72	A6NCS6	295 aa		14.06	□□□□□ -0.16
ARID1B-231	ENST00000637887	RTN4	Q9NQC3	1192 aa	Known RBP	14.06	□□□□□ -0.16
ARID1B-231	ENST00000637887	KIF3C	O14782	793 aa		14.05	□□□□□ -0.16
ARID1B-231	ENST00000637887	AMER1	Q5JTC6	1135 aa	Predicted RBP	14.05	□□□□□ -0.16
ARID1B-231	ENST00000637887	EMP3	P54852	163 aa		14.04	□□□□□ -0.16
ARID1B-231	ENST00000637887	CDAN1	Q8IWY9	1227 aa		14.04	□□□□□ -0.16
ARID1B-231	ENST00000637887	PCDH10	Q9P2E7	1040 aa		14.04	□□□□□ -0.16
ARID1B-231	ENST00000637887	HOXB1	P14653	301 aa	Predicted RBP	14	□□□□□ -0.17
ARID1B-231	ENST00000637887	TMC2	Q8TDI7	906 aa		14	□□□□□ -0.17
ARID1B-231	ENST00000637887	RIMBP2	O15034	1052 aa		13.99	□□□□□ -0.17
ARID1B-231	ENST00000637887	GTPBP6	O43824	516 aa	Predicted RBP	13.99	□□□□□ -0.17
ARID1B-231	ENST00000637887	RYDEN	Q9NUL5	291 aa	Known RBP	13.99	□□□□□ -0.17
ARID1B-231	ENST00000637887	FAM205C	A6NFA0	338 aa		13.98	□□□□□ -0.17
ARID1B-231	ENST00000637887	POTEB3	A0JP26	581 aa		13.96	□□□□□ -0.17
ARID1B-231	ENST00000637887	POTEB	Q6S5H4	581 aa		13.96	□□□□□ -0.17
ARID1B-231	ENST00000637887	GPR153	Q6NV75	609 aa		13.93	□□□□□ -0.18
ARID1B-231	ENST00000637887	HS3ST6	Q96QI5	342 aa		13.93	□□□□□ -0.18
ARID1B-231	ENST00000637887	ZSWIM6	Q9HCJ5	1215 aa		13.93	□□□□□ -0.18
ARID1B-231	ENST00000637887	ARSI	Q5FYB1	569 aa		13.92	□□□□□ -0.18
ARID1B-231	ENST00000637887	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	4e-7	■■■□□ 19.1
ARID1B-231	ENST00000637887	GPHN	Q9NQX3	736 aa	Predicted RBP	13.88	□□□□□ -0.19
ARID1B-231	ENST00000637887	ERBB3	P21860	1342 aa		13.87	□□□□□ -0.19
ARID1B-231	ENST00000637887	FOXK1	P85037	733 aa		13.85	□□□□□ -0.19
ARID1B-231	ENST00000637887	DSG2	Q14126	1118 aa		13.84	□□□□□ -0.19
ARID1B-231	ENST00000637887	PLPP6	Q8IY26	295 aa		13.84	□□□□□ -0.19
ARID1B-231	ENST00000637887	SLC34A2	O95436	690 aa		13.82	□□□□□ -0.2
ARID1B-231	ENST00000637887	VARS2	Q5ST30	1063 aa	Known RBP	13.82	□□□□□ -0.2
ARID1B-231	ENST00000637887	BBX	Q8WY36	941 aa	Predicted RBP	13.81	□□□□□ -0.2
ARID1B-231	ENST00000637887	PCDHGA4	Q9Y5G9	962 aa		13.81	□□□□□ -0.2
ARID1B-231	ENST00000637887	CRISPLD2	Q9H0B8	497 aa		13.8	□□□□□ -0.2
ARID1B-231	ENST00000637887	NCKAP5L	Q9HCH0	1330 aa		13.79	□□□□□ -0.2
ARID1B-231	ENST00000637887	NUDT7	P0C024	238 aa		13.79	□□□□□ -0.2
ARID1B-231	ENST00000637887	KRTAP3-3	Q9BYR6	98 aa		13.78	□□□□□ -0.2
ARID1B-231	ENST00000637887	KRTAP3-2	Q9BYR7	98 aa		13.78	□□□□□ -0.2
ARID1B-231	ENST00000637887	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.74	□□□□□ -0.21
ARID1B-231	ENST00000637887	PDE4A	P27815	886 aa		13.74	□□□□□ -0.21
ARID1B-231	ENST00000637887	CADPS2	Q86UW7	1296 aa		13.74	□□□□□ -0.21
ARID1B-231	ENST00000637887	PTCD2	Q8WV60	388 aa	Known RBP	13.73	□□□□□ -0.21
ARID1B-231	ENST00000637887	PPP1R15B	Q5SWA1	713 aa		13.72	□□□□□ -0.21
ARID1B-231	ENST00000637887	LARP6	Q9BRS8	491 aa	Known RBP	13.71	□□□□□ -0.21
ARID1B-231	ENST00000637887	LHX6	Q9UPM6	363 aa		13.7	□□□□□ -0.22
ARID1B-231	ENST00000637887	ZNF687	Q8N1G0	1237 aa		13.69	□□□□□ -0.22
ARID1B-231	ENST00000637887	SPNS2	Q8IVW8	549 aa		13.68	□□□□□ -0.22
ARID1B-231	ENST00000637887	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.67	□□□□□ -0.22
ARID1B-231	ENST00000637887	SPRYD3	Q8NCJ5	442 aa		13.67	□□□□□ -0.22
ARID1B-231	ENST00000637887	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
ARID1B-231	ENST00000637887	KDM4F	A0A1W2PPD8	638 aa		13.66	□□□□□ -0.22
ARID1B-231	ENST00000637887	DDX27	Q96GQ7	796 aa	Known RBP	13.65	□□□□□ -0.22
ARID1B-231	ENST00000637887	OXER1	Q8TDS5	423 aa		13.64	□□□□□ -0.23
ARID1B-231	ENST00000637887	TBC1D12	O60347	775 aa		13.62	□□□□□ -0.23
ARID1B-231	ENST00000637887	MFSD10	Q14728	455 aa		13.62	□□□□□ -0.23
ARID1B-231	ENST00000637887	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.61	□□□□□ -0.23
ARID1B-231	ENST00000637887	CFAP44	Q96MT7	982 aa		13.61	□□□□□ -0.23
ARID1B-231	ENST00000637887	MMRN1	Q13201	1228 aa		13.59	□□□□□ -0.23
ARID1B-231	ENST00000637887	POTEE	Q6S8J3	1075 aa		13.55	□□□□□ -0.24
ARID1B-231	ENST00000637887	EMILIN3	Q9NT22	766 aa		13.54	□□□□□ -0.24
ARID1B-231	ENST00000637887	AXIN2	Q9Y2T1	843 aa		13.54	□□□□□ -0.24
ARID1B-231	ENST00000637887	PSD	A5PKW4	1024 aa	Predicted RBP	13.51	□□□□□ -0.25
ARID1B-231	ENST00000637887	ANKRD13D	Q6ZTN6	518 aa		13.5	□□□□□ -0.25
ARID1B-231	ENST00000637887	EVI5	O60447	810 aa		13.48	□□□□□ -0.25
ARID1B-231	ENST00000637887	PBX2	P40425	430 aa		13.48	□□□□□ -0.25
ARID1B-231	ENST00000637887	MAP3K9	P80192	1104 aa		13.48	□□□□□ -0.25
ARID1B-231	ENST00000637887	LSM11	P83369	360 aa	Known RBP eCLIP	13.48	□□□□□ -0.25	2e-8	■■■■□ 20.3
ARID1B-231	ENST00000637887	PPP4R3B	Q5MIZ7	849 aa		13.47	□□□□□ -0.25
ARID1B-231	ENST00000637887	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.44	□□□□□ -0.26
ARID1B-231	ENST00000637887	ARHGAP33	O14559	1287 aa		13.43	□□□□□ -0.26
ARID1B-231	ENST00000637887	CAMK2B	Q13554	666 aa		13.43	□□□□□ -0.26
ARID1B-231	ENST00000637887	ZNF454	Q8N9F8	522 aa		13.43	□□□□□ -0.26
ARID1B-231	ENST00000637887	PSEN2	P49810	448 aa		13.42	□□□□□ -0.26
ARID1B-231	ENST00000637887	FOSB	P53539	338 aa		13.39	□□□□□ -0.27
ARID1B-231	ENST00000637887	DMRTA1	Q5VZB9	504 aa		13.39	□□□□□ -0.27
ARID1B-231	ENST00000637887	DPYSL4	O14531	572 aa		13.38	□□□□□ -0.27
ARID1B-231	ENST00000637887	MYT1L	Q9UL68	1186 aa		13.37	□□□□□ -0.27
ARID1B-231	ENST00000637887	KCNK17	Q96T54	332 aa		13.36	□□□□□ -0.27
ARID1B-231	ENST00000637887	JPH4	Q96JJ6	628 aa		13.35	□□□□□ -0.27
ARID1B-231	ENST00000637887	RNF166	Q96A37	237 aa	Predicted RBP	13.34	□□□□□ -0.27
ARID1B-231	ENST00000637887	TSHZ2	Q9NRE2	1034 aa		13.34	□□□□□ -0.27
ARID1B-231	ENST00000637887	ADGRD1	Q6QNK2	874 aa		13.33	□□□□□ -0.28
ARID1B-231	ENST00000637887	BCL2L12	Q9HB09	334 aa		13.32	□□□□□ -0.28
ARID1B-231	ENST00000637887	PTGER2	P43116	358 aa		13.31	□□□□□ -0.28
ARID1B-231	ENST00000637887	ZDHHC16	Q969W1	377 aa		13.31	□□□□□ -0.28
ARID1B-231	ENST00000637887	ADAM33	Q9BZ11	813 aa		13.31	□□□□□ -0.28
ARID1B-231	ENST00000637887	WDR70	Q9NW82	654 aa		13.31	□□□□□ -0.28
ARID1B-231	ENST00000637887	PCDHGA10	Q9Y5H3	936 aa		13.3	□□□□□ -0.28
ARID1B-231	ENST00000637887	E2F4	Q16254	413 aa		13.29	□□□□□ -0.28
ARID1B-231	ENST00000637887	KCNH8	Q96L42	1107 aa		13.29	□□□□□ -0.28
ARID1B-231	ENST00000637887	TK2	O00142	265 aa		13.27	□□□□□ -0.29
ARID1B-231	ENST00000637887	PTPRE	P23469	700 aa		13.26	□□□□□ -0.29
ARID1B-231	ENST00000637887	HR	O43593	1189 aa		13.23	□□□□□ -0.29
ARID1B-231	ENST00000637887	PHF14	O94880	888 aa		13.23	□□□□□ -0.29
ARID1B-231	ENST00000637887	DDX12P	Q92771	950 aa		13.23	□□□□□ -0.29
ARID1B-231	ENST00000637887	TYW1B	Q6NUM6	668 aa		13.22	□□□□□ -0.29
ARID1B-231	ENST00000637887	VPS9D1	Q9Y2B5	631 aa		13.22	□□□□□ -0.29
ARID1B-231	ENST00000637887	PDIA6	Q15084	440 aa		13.21	□□□□□ -0.3
ARID1B-231	ENST00000637887	FBXW7	Q969H0	707 aa		13.19	□□□□□ -0.3
ARID1B-231	ENST00000637887	ZBED2	Q9BTP6	218 aa		13.18	□□□□□ -0.3
ARID1B-231	ENST00000637887	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.16	□□□□□ -0.3
ARID1B-231	ENST00000637887	EPAS1	Q99814	870 aa		13.16	□□□□□ -0.3
ARID1B-231	ENST00000637887	SLC4A5	Q9BY07	1137 aa		13.16	□□□□□ -0.3

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