RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 MSNP26038 577 aaKnown RBP20.96■□□□□ 0.95
CACNA1A-238ENST00000637276 STK26Q9P289 416 aa20.96■□□□□ 0.95
CACNA1A-238ENST00000637276 EIF4G2P78344 907 aaKnown RBP eCLIP20.95■□□□□ 0.94
CACNA1A-238ENST00000637276 KNSTRNQ9Y448 316 aa20.94■□□□□ 0.94
CACNA1A-238ENST00000637276 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
CACNA1A-238ENST00000637276 FBXW7Q969H0 707 aa20.91■□□□□ 0.94
CACNA1A-238ENST00000637276 NRDCO43847 1150 aa20.91■□□□□ 0.94
CACNA1A-238ENST00000637276 TAF7LQ5H9L4 462 aa20.91■□□□□ 0.94
CACNA1A-238ENST00000637276 TOMM22Q9NS69 142 aa20.91■□□□□ 0.94
CACNA1A-238ENST00000637276 TNNT3P45378 269 aaPredicted RBP20.9■□□□□ 0.94
CACNA1A-238ENST00000637276 MTUS2Q5JR59 1369 aa20.89■□□□□ 0.93
CACNA1A-238ENST00000637276 ANP32EQ9BTT0 268 aa20.87■□□□□ 0.93
CACNA1A-238ENST00000637276 MARCH6O60337 910 aa20.87■□□□□ 0.93
CACNA1A-238ENST00000637276 FRAT2O75474 233 aaPredicted RBP20.87■□□□□ 0.93
CACNA1A-238ENST00000637276 FOXD4L6Q3SYB3 417 aaPredicted RBP20.86■□□□□ 0.93
CACNA1A-238ENST00000637276 FOXD4L3Q6VB84 417 aaPredicted RBP20.86■□□□□ 0.93
CACNA1A-238ENST00000637276 GORABQ5T7V8 394 aa20.86■□□□□ 0.93
CACNA1A-238ENST00000637276 HSCBQ8IWL3 235 aa20.83■□□□□ 0.93
CACNA1A-238ENST00000637276 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
CACNA1A-238ENST00000637276 NOP58Q9Y2X3 529 aaKnown RBP20.83■□□□□ 0.92
CACNA1A-238ENST00000637276 SRPK2P78362 688 aaKnown RBP20.82■□□□□ 0.92
CACNA1A-238ENST00000637276 NUTM2FA1L443 756 aa20.82■□□□□ 0.92
CACNA1A-238ENST00000637276 CEP89Q96ST8 783 aa20.8■□□□□ 0.92
CACNA1A-238ENST00000637276 CARD11Q9BXL7 1154 aa20.79■□□□□ 0.92
CACNA1A-238ENST00000637276 VSIG10Q8N0Z9 540 aa20.78■□□□□ 0.92
CACNA1A-238ENST00000637276 CCAR2Q8N163 923 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-238ENST00000637276 LTV1Q96GA3 475 aaPredicted RBP20.78■□□□□ 0.92
CACNA1A-238ENST00000637276 RTF1Q92541 710 aaKnown RBP20.77■□□□□ 0.92
CACNA1A-238ENST00000637276 NUTM2DQ5VT03 806 aaPredicted RBP20.76■□□□□ 0.91
CACNA1A-238ENST00000637276 DHX37Q8IY37 1157 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-238ENST00000637276 CWC22Q9HCG8 908 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-238ENST00000637276 TRIM6-TRIM34B2RNG4 842 aa20.75■□□□□ 0.91
CACNA1A-238ENST00000637276 NGEFQ8N5V2 710 aa20.75■□□□□ 0.91
CACNA1A-238ENST00000637276 KIAA1211Q6ZU35 1233 aa20.73■□□□□ 0.91
CACNA1A-238ENST00000637276 KDM4AO75164 1064 aa20.73■□□□□ 0.91
CACNA1A-238ENST00000637276 MCCP23508 829 aa20.73■□□□□ 0.91
CACNA1A-238ENST00000637276 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
CACNA1A-238ENST00000637276 SLKQ9H2G2 1235 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-238ENST00000637276 GTF2E1P29083 439 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-238ENST00000637276 PTMSP20962 102 aa20.7■□□□□ 0.9
CACNA1A-238ENST00000637276 SLC4A10Q6U841 1118 aa20.7■□□□□ 0.9
CACNA1A-238ENST00000637276 SIN3AQ96ST3 1273 aa20.7■□□□□ 0.9
CACNA1A-238ENST00000637276 DEKP35659 375 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-238ENST00000637276 TCEAL9Q9UHQ7 104 aa20.69■□□□□ 0.9
CACNA1A-238ENST00000637276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.69■□□□□ 0.97e-11■■■■■ 260.8
CACNA1A-238ENST00000637276 GOLGA6L1Q8N7Z2 621 aa20.68■□□□□ 0.9
CACNA1A-238ENST00000637276 IBSPP21815 317 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-238ENST00000637276 FOSBP53539 338 aa20.66■□□□□ 0.9
CACNA1A-238ENST00000637276 SKIDA1Q1XH10 827 aa20.64■□□□□ 0.9
CACNA1A-238ENST00000637276 PPP1R1BQ9UD71 204 aaPredicted RBP20.64■□□□□ 0.9
CACNA1A-238ENST00000637276 CTDP1Q9Y5B0 961 aaPredicted RBP20.64■□□□□ 0.89
CACNA1A-238ENST00000637276 MTMR7Q9Y216 660 aa20.63■□□□□ 0.89
CACNA1A-238ENST00000637276 TPD52L1Q16890 204 aaPredicted RBP20.63■□□□□ 0.89
CACNA1A-238ENST00000637276 MEX3CQ5U5Q3 659 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-238ENST00000637276 SLC4A3P48751 1232 aa20.62■□□□□ 0.89
CACNA1A-238ENST00000637276 ITPRIPQ8IWB1 547 aa20.62■□□□□ 0.89
CACNA1A-238ENST00000637276 WDR70Q9NW82 654 aa20.62■□□□□ 0.89
CACNA1A-238ENST00000637276 PLEKHD1A6NEE1 506 aa20.61■□□□□ 0.89
CACNA1A-238ENST00000637276 MFAP1P55081 439 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-238ENST00000637276 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
CACNA1A-238ENST00000637276 PPP4R2Q9NY27 417 aa20.59■□□□□ 0.89
CACNA1A-238ENST00000637276 PCMTD1Q96MG8 357 aaPredicted RBP20.59■□□□□ 0.89
CACNA1A-238ENST00000637276 SYTL4Q96C24 671 aaPredicted RBP20.58■□□□□ 0.89
CACNA1A-238ENST00000637276 TRIM34Q9BYJ4 488 aa20.57■□□□□ 0.88
CACNA1A-238ENST00000637276 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-238ENST00000637276 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-238ENST00000637276 TPM4P67936 248 aa20.54■□□□□ 0.88
CACNA1A-238ENST00000637276 DHX16O60231 1041 aaKnown RBP20.53■□□□□ 0.88
CACNA1A-238ENST00000637276 ZNF592Q92610 1267 aa20.53■□□□□ 0.88
CACNA1A-238ENST00000637276 MORC1Q86VD1 984 aa20.53■□□□□ 0.88
CACNA1A-238ENST00000637276 FYB1O15117 783 aa20.52■□□□□ 0.88
CACNA1A-238ENST00000637276 ZNF428Q96B54 188 aa20.52■□□□□ 0.88
CACNA1A-238ENST00000637276 NECTIN2Q92692 538 aa20.52■□□□□ 0.88
CACNA1A-238ENST00000637276 CDCA8Q53HL2 280 aa20.51■□□□□ 0.87
CACNA1A-238ENST00000637276 PAF1Q8N7H5 531 aa20.51■□□□□ 0.87
CACNA1A-238ENST00000637276 GGT6Q6P531 493 aa20.51■□□□□ 0.87
CACNA1A-238ENST00000637276 DCAF11Q8TEB1 546 aa20.49■□□□□ 0.87
CACNA1A-238ENST00000637276 TPM3P06753 285 aa20.49■□□□□ 0.87
CACNA1A-238ENST00000637276 PPM1FP49593 454 aaPredicted RBP20.49■□□□□ 0.87
CACNA1A-238ENST00000637276 AK7Q96M32 723 aa20.49■□□□□ 0.87
CACNA1A-238ENST00000637276 SF3A1Q15459 793 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-238ENST00000637276 CALRP27797 417 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-238ENST00000637276 CCDC146Q8IYE0 955 aa20.47■□□□□ 0.87
CACNA1A-238ENST00000637276 ZFYVE27Q5T4F4 411 aa20.46■□□□□ 0.87
CACNA1A-238ENST00000637276 MCTP1Q6DN14 999 aa20.45■□□□□ 0.86
CACNA1A-238ENST00000637276 EVA1CP58658 441 aa20.45■□□□□ 0.86
CACNA1A-238ENST00000637276 FOXD1Q16676 465 aa20.45■□□□□ 0.86
CACNA1A-238ENST00000637276 CLUAP1Q96AJ1 413 aa20.44■□□□□ 0.86
CACNA1A-238ENST00000637276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.44■□□□□ 0.86
CACNA1A-238ENST00000637276 CLIP1P30622 1438 aa20.43■□□□□ 0.86
CACNA1A-238ENST00000637276 RILPL2Q969X0 211 aa20.43■□□□□ 0.86
CACNA1A-238ENST00000637276 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
CACNA1A-238ENST00000637276 PLCD4Q9BRC7 762 aa20.41■□□□□ 0.86
CACNA1A-238ENST00000637276 SETQ01105 290 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-238ENST00000637276 NAP1L1P55209 391 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-238ENST00000637276 H3BQV1 296 aa20.4■□□□□ 0.86
CACNA1A-238ENST00000637276 IFFO2Q5TF58 517 aa20.4■□□□□ 0.86
CACNA1A-238ENST00000637276 TMEM132AQ24JP5 1023 aa20.39■□□□□ 0.85
CACNA1A-238ENST00000637276 RRP12Q5JTH9 1297 aaKnown RBP20.38■□□□□ 0.85
CACNA1A-238ENST00000637276 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms