RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ATP1B4Q9UN42 357 aaPredicted RBP29.9■■■□□ 2.38
CLN6-214ENST00000636314 YEATS2Q9ULM3 1422 aa29.89■■■□□ 2.38
CLN6-214ENST00000636314 FER1L4A9Z1Z3 1794 aa29.87■■■□□ 2.37
CLN6-214ENST00000636314 MYO5CQ9NQX4 1742 aa29.85■■■□□ 2.37
CLN6-214ENST00000636314 MAGI2Q86UL8 1455 aa29.85■■■□□ 2.37
CLN6-214ENST00000636314 PLCH2O75038 1416 aa29.83■■■□□ 2.37
CLN6-214ENST00000636314 CLIP1P30622 1438 aa29.82■■■□□ 2.36
CLN6-214ENST00000636314 SCAPERQ9BY12 1400 aa29.82■■■□□ 2.36
CLN6-214ENST00000636314 MLECQ14165 292 aa29.82■■■□□ 2.36
CLN6-214ENST00000636314 LRRIQ1Q96JM4 1722 aa29.82■■■□□ 2.36
CLN6-214ENST00000636314 HSPA2P54652 639 aa29.79■■■□□ 2.36
CLN6-214ENST00000636314 CASKIN1Q8WXD9 1431 aa29.77■■■□□ 2.36
CLN6-214ENST00000636314 KIF14Q15058 1648 aa29.75■■■□□ 2.35
CLN6-214ENST00000636314 CDK11AQ9UQ88 783 aaPredicted RBP29.75■■■□□ 2.35
CLN6-214ENST00000636314 CCDC18Q5T9S5 1454 aa29.73■■■□□ 2.35
CLN6-214ENST00000636314 EFCAB2Q5VUJ9 269 aa29.72■■■□□ 2.35
CLN6-214ENST00000636314 ATP10AO60312 1499 aa29.71■■■□□ 2.35
CLN6-214ENST00000636314 FYCO1Q9BQS8 1478 aa29.71■■■□□ 2.35
CLN6-214ENST00000636314 TROQ12816 1431 aaPredicted RBP29.7■■■□□ 2.34
CLN6-214ENST00000636314 C9orf84Q5VXU9 1444 aa29.7■■■□□ 2.34
CLN6-214ENST00000636314 ARHGAP5Q13017 1502 aa29.67■■■□□ 2.34
CLN6-214ENST00000636314 ARHGEF12Q9NZN5 1544 aa29.67■■■□□ 2.34
CLN6-214ENST00000636314 PREX1Q8TCU6 1659 aa29.65■■■□□ 2.34
CLN6-214ENST00000636314 ZNF518AQ6AHZ1 1483 aa29.63■■■□□ 2.33
CLN6-214ENST00000636314 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
CLN6-214ENST00000636314 MYT1LQ9UL68 1186 aa29.6■■■□□ 2.33
CLN6-214ENST00000636314 CDC42BPBQ9Y5S2 1711 aa29.59■■■□□ 2.33
CLN6-214ENST00000636314 KDM5CP41229 1560 aa29.59■■■□□ 2.33
CLN6-214ENST00000636314 AFAP1Q8N556 730 aa29.56■■■□□ 2.32
CLN6-214ENST00000636314 CEBPAP49715 358 aaPredicted RBP29.55■■■□□ 2.32
CLN6-214ENST00000636314 DIP2CQ9Y2E4 1556 aa29.55■■■□□ 2.32
CLN6-214ENST00000636314 CERKQ8TCT0 537 aa29.52■■■□□ 2.32
CLN6-214ENST00000636314 PREX2Q70Z35 1606 aa29.52■■■□□ 2.32
CLN6-214ENST00000636314 ABCA6Q8N139 1617 aa29.52■■■□□ 2.32
CLN6-214ENST00000636314 ITSN2Q9NZM3 1697 aa29.49■■■□□ 2.31
CLN6-214ENST00000636314 REREQ9P2R6 1566 aa29.48■■■□□ 2.31
CLN6-214ENST00000636314 SETD1BQ9UPS6 1966 aaKnown RBP29.48■■■□□ 2.31
CLN6-214ENST00000636314 STRCQ7RTU9 1775 aa29.47■■■□□ 2.31
CLN6-214ENST00000636314 ABCC1P33527 1531 aa29.46■■■□□ 2.31
CLN6-214ENST00000636314 C3P01024 1663 aa29.45■■■□□ 2.31
CLN6-214ENST00000636314 UHRF1BP1Q6BDS2 1440 aa29.45■■■□□ 2.3
CLN6-214ENST00000636314 MLH3Q9UHC1 1453 aa29.44■■■□□ 2.3
CLN6-214ENST00000636314 CDC42BPAQ5VT25 1732 aa29.44■■■□□ 2.3
CLN6-214ENST00000636314 LOC105371045A0A1W2PR82 267 aa29.43■■■□□ 2.3
CLN6-214ENST00000636314 TRAPPC8Q9Y2L5 1435 aa29.41■■■□□ 2.3
CLN6-214ENST00000636314 KIDINS220Q9ULH0 1771 aa29.39■■■□□ 2.29
CLN6-214ENST00000636314 ESF1Q9H501 851 aaKnown RBP29.38■■■□□ 2.29
CLN6-214ENST00000636314 AGLP35573 1532 aa29.37■■■□□ 2.29
CLN6-214ENST00000636314 DMRT2Q9Y5R5 561 aa29.37■■■□□ 2.29
CLN6-214ENST00000636314 MTUS2Q5JR59 1369 aa29.37■■■□□ 2.29
CLN6-214ENST00000636314 EHBP1L1Q8N3D4 1523 aa29.34■■■□□ 2.29
CLN6-214ENST00000636314 VPS8Q8N3P4 1428 aa29.28■■■□□ 2.28
CLN6-214ENST00000636314 SAMD9LQ8IVG5 1584 aa29.28■■■□□ 2.28
CLN6-214ENST00000636314 ZNF777Q9ULD5 760 aaPredicted RBP29.28■■■□□ 2.28
CLN6-214ENST00000636314 GPATCH8Q9UKJ3 1502 aaKnown RBP29.28■■■□□ 2.28
CLN6-214ENST00000636314 SUPT6HQ7KZ85 1726 aaKnown RBP29.25■■■□□ 2.27
CLN6-214ENST00000636314 SYCP2Q9BX26 1530 aa29.25■■■□□ 2.27
CLN6-214ENST00000636314 CNTLNQ9NXG0 1405 aa29.25■■■□□ 2.27
CLN6-214ENST00000636314 CCNB3Q8WWL7 1395 aa29.25■■■□□ 2.27
CLN6-214ENST00000636314 PTPRTO14522 1441 aa29.23■■■□□ 2.27
CLN6-214ENST00000636314 TIAM1Q13009 1591 aa29.22■■■□□ 2.27
CLN6-214ENST00000636314 MROH2AA6NES4 1674 aa29.22■■■□□ 2.27
CLN6-214ENST00000636314 SPAG9O60271 1321 aaKnown RBP29.19■■■□□ 2.26
CLN6-214ENST00000636314 HNRNPMP52272 730 aaKnown RBP eCLIP29.17■■■□□ 2.26
CLN6-214ENST00000636314 CFDP1Q9UEE9 299 aaPredicted RBP29.17■■■□□ 2.26
CLN6-214ENST00000636314 PLEKHH2Q8IVE3 1493 aa29.16■■■□□ 2.26
CLN6-214ENST00000636314 CLTCQ00610 1675 aaKnown RBP29.15■■■□□ 2.26
CLN6-214ENST00000636314 ATP7AQ04656 1500 aa29.15■■■□□ 2.26
CLN6-214ENST00000636314 NCOA1Q15788 1441 aa29.14■■■□□ 2.26
CLN6-214ENST00000636314 INO80Q9ULG1 1556 aaPredicted RBP29.13■■■□□ 2.25
CLN6-214ENST00000636314 CAMSAP1Q5T5Y3 1602 aa29.12■■■□□ 2.25
CLN6-214ENST00000636314 NPATQ14207 1427 aa29.11■■■□□ 2.25
CLN6-214ENST00000636314 LTBP4Q8N2S1 1624 aa29.11■■■□□ 2.25
CLN6-214ENST00000636314 KIAA1107Q9UPP5 1409 aa29.11■■■□□ 2.25
CLN6-214ENST00000636314 NCOA2Q15596 1464 aa29.1■■■□□ 2.25
CLN6-214ENST00000636314 ZMYM3Q14202 1370 aa29.1■■■□□ 2.25
CLN6-214ENST00000636314 DISP3Q9P2K9 1392 aa29.1■■■□□ 2.25
CLN6-214ENST00000636314 PLXNC1O60486 1568 aa29.09■■■□□ 2.25
CLN6-214ENST00000636314 A2MP01023 1474 aa29.08■■■□□ 2.25
CLN6-214ENST00000636314 LRRC9Q6ZRR7 1453 aa29.07■■■□□ 2.24
CLN6-214ENST00000636314 MYO3AQ8NEV4 1616 aa29.06■■■□□ 2.24
CLN6-214ENST00000636314 MAP3K1Q13233 1512 aa29.06■■■□□ 2.24
CLN6-214ENST00000636314 ADGBQ8N7X0 1667 aa29.05■■■□□ 2.24
CLN6-214ENST00000636314 ZNF142P52746 1687 aaPredicted RBP29.04■■■□□ 2.24
CLN6-214ENST00000636314 IQSEC2Q5JU85 1478 aa29.02■■■□□ 2.24
CLN6-214ENST00000636314 GGT6Q6P531 493 aa29.01■■■□□ 2.23
CLN6-214ENST00000636314 NCKAP5LQ9HCH0 1330 aa28.99■■■□□ 2.23
CLN6-214ENST00000636314 ZNF644Q9H582 1327 aaPredicted RBP28.98■■■□□ 2.23
CLN6-214ENST00000636314 SPATA31D1Q6ZQQ2 1576 aa28.98■■■□□ 2.23
CLN6-214ENST00000636314 CEP170BQ9Y4F5 1589 aaPredicted RBP28.98■■■□□ 2.23
CLN6-214ENST00000636314 CAMSAP2Q08AD1 1489 aa28.97■■■□□ 2.23
CLN6-214ENST00000636314 PTPRKQ15262 1439 aa28.96■■■□□ 2.23
CLN6-214ENST00000636314 ILDR2Q71H61 639 aa28.96■■■□□ 2.23
CLN6-214ENST00000636314 MBD5Q9P267 1494 aa28.95■■■□□ 2.22
CLN6-214ENST00000636314 PLA2R1Q13018 1463 aa28.92■■■□□ 2.22
CLN6-214ENST00000636314 KANK4Q5T7N3 995 aaPredicted RBP28.92■■■□□ 2.22
CLN6-214ENST00000636314 ZNF335Q9H4Z2 1342 aaPredicted RBP28.91■■■□□ 2.22
CLN6-214ENST00000636314 APLP2Q06481 763 aa28.9■■■□□ 2.22
CLN6-214ENST00000636314 PKD2Q13563 968 aa28.9■■■□□ 2.22
CLN6-214ENST00000636314 CCDC141Q6ZP82 1450 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms