RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 ESPNB1AK53 854 aa7.86□□□□□ -1.15
CHD2-221ENST00000635856 LETM1O95202 739 aaPredicted RBP7.86□□□□□ -1.15
CHD2-221ENST00000635856 FAM193AP78312 1265 aa7.86□□□□□ -1.15
CHD2-221ENST00000635856 PRDM10Q9NQV6 1147 aa7.86□□□□□ -1.15
CHD2-221ENST00000635856 AXDND1Q5T1B0 1012 aaPredicted RBP7.86□□□□□ -1.15
CHD2-221ENST00000635856 GTPBP4Q9BZE4 634 aaKnown RBP7.85□□□□□ -1.15
CHD2-221ENST00000635856 BAZ1AQ9NRL2 1556 aaPredicted RBP7.85□□□□□ -1.15
CHD2-221ENST00000635856 FRAT2O75474 233 aaPredicted RBP7.84□□□□□ -1.15
CHD2-221ENST00000635856 E9PSI1 815 aa7.84□□□□□ -1.15
CHD2-221ENST00000635856 MAPK8IP2Q13387 824 aaPredicted RBP7.84□□□□□ -1.15
CHD2-221ENST00000635856 TNNT3P45378 269 aaPredicted RBP7.84□□□□□ -1.15
CHD2-221ENST00000635856 MS4A1P11836 297 aa7.83□□□□□ -1.16
CHD2-221ENST00000635856 HDAC5Q9UQL6 1122 aa7.83□□□□□ -1.16
CHD2-221ENST00000635856 BECN1Q14457 450 aa7.83□□□□□ -1.16
CHD2-221ENST00000635856 DMTNQ08495 405 aa7.83□□□□□ -1.16
CHD2-221ENST00000635856 CC2D1BQ5T0F9 858 aaKnown RBP7.83□□□□□ -1.16
CHD2-221ENST00000635856 ZNF830Q96NB3 372 aaPredicted RBP7.83□□□□□ -1.16
CHD2-221ENST00000635856 DNAJC2Q99543 621 aaKnown RBP7.83□□□□□ -1.16
CHD2-221ENST00000635856 HMGB1P09429 215 aaKnown RBP7.82□□□□□ -1.16
CHD2-221ENST00000635856 AEBP1Q8IUX7 1158 aa7.82□□□□□ -1.16
CHD2-221ENST00000635856 ZNF622Q969S3 477 aaKnown RBP eCLIP7.82□□□□□ -1.161e-7■■□□□ 14.5
CHD2-221ENST00000635856 ZNF771Q7L3S4 317 aaPredicted RBP7.81□□□□□ -1.16
CHD2-221ENST00000635856 MRE11P49959 708 aa7.81□□□□□ -1.16
CHD2-221ENST00000635856 VGFO15240 615 aaPredicted RBP7.8□□□□□ -1.16
CHD2-221ENST00000635856 TMEM51Q9NW97 253 aa7.8□□□□□ -1.16
CHD2-221ENST00000635856 BAZ1BQ9UIG0 1483 aaKnown RBP7.8□□□□□ -1.16
CHD2-221ENST00000635856 CGNQ9P2M7 1197 aaKnown RBP7.79□□□□□ -1.16
CHD2-221ENST00000635856 SLC4A3P48751 1232 aa7.79□□□□□ -1.16
CHD2-221ENST00000635856 CCDC66A2RUB6 948 aa7.79□□□□□ -1.16
CHD2-221ENST00000635856 UBTFP17480 764 aaKnown RBP7.78□□□□□ -1.16
CHD2-221ENST00000635856 TERF1P54274 439 aa7.78□□□□□ -1.16
CHD2-221ENST00000635856 PLCD4Q9BRC7 762 aa7.78□□□□□ -1.16
CHD2-221ENST00000635856 FAM9BQ8IZU0 186 aa7.78□□□□□ -1.16
CHD2-221ENST00000635856 RGS22Q8NE09 1264 aa7.78□□□□□ -1.16
CHD2-221ENST00000635856 BACH2Q9BYV9 841 aa7.78□□□□□ -1.16
CHD2-221ENST00000635856 TAOK2Q9UL54 1235 aa7.78□□□□□ -1.16
CHD2-221ENST00000635856 R3HCC1Q9Y3T6 440 aaKnown RBP7.78□□□□□ -1.16
CHD2-221ENST00000635856 TSPYL1Q9H0U9 437 aa7.77□□□□□ -1.17
CHD2-221ENST00000635856 CHRM1P11229 460 aaPredicted RBP7.77□□□□□ -1.17
CHD2-221ENST00000635856 RSF1Q96T23 1441 aaPredicted RBP7.77□□□□□ -1.17
CHD2-221ENST00000635856 TPRNQ4KMQ1 711 aa7.76□□□□□ -1.17
CHD2-221ENST00000635856 GZF1Q9H116 711 aaPredicted RBP7.76□□□□□ -1.17
CHD2-221ENST00000635856 SMARCA2P51531 1590 aa7.76□□□□□ -1.17
CHD2-221ENST00000635856 CCDC94Q9BW85 323 aaPredicted RBP7.76□□□□□ -1.17
CHD2-221ENST00000635856 POGKQ9P215 609 aa7.76□□□□□ -1.17
CHD2-221ENST00000635856 CSPP1Q1MSJ5 1256 aa7.76□□□□□ -1.17
CHD2-221ENST00000635856 UQCRHLA0A096LP55 91 aa7.75□□□□□ -1.17
CHD2-221ENST00000635856 UQCRHP07919 91 aa7.75□□□□□ -1.17
CHD2-221ENST00000635856 DYNC1I1O14576 645 aa7.75□□□□□ -1.17
CHD2-221ENST00000635856 ISY1Q9ULR0 285 aaKnown RBP7.75□□□□□ -1.17
CHD2-221ENST00000635856 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.75□□□□□ -1.17
CHD2-221ENST00000635856 SIN3AQ96ST3 1273 aa7.74□□□□□ -1.17
CHD2-221ENST00000635856 XRCC6P12956 609 aaKnown RBP eCLIP7.74□□□□□ -1.172e-9■■■■■ 28.3
CHD2-221ENST00000635856 RNF216Q9NWF9 866 aaPredicted RBP7.74□□□□□ -1.17
CHD2-221ENST00000635856 CLSTN1O94985 981 aa7.74□□□□□ -1.17
CHD2-221ENST00000635856 KCNJ4P48050 445 aa7.73□□□□□ -1.17
CHD2-221ENST00000635856 WRNQ14191 1432 aaPredicted RBP eCLIP7.73□□□□□ -1.17
CHD2-221ENST00000635856 TICAM2Q86XR7 235 aa7.73□□□□□ -1.17
CHD2-221ENST00000635856 UPF2Q9HAU5 1272 aaKnown RBP7.73□□□□□ -1.17
CHD2-221ENST00000635856 CECR2Q9BXF3 1484 aa7.72□□□□□ -1.17
CHD2-221ENST00000635856 OFD1O75665 1012 aa7.72□□□□□ -1.17
CHD2-221ENST00000635856 RALBP1Q15311 655 aa7.72□□□□□ -1.17
CHD2-221ENST00000635856 MRS2Q9HD23 443 aa7.72□□□□□ -1.17
CHD2-221ENST00000635856 CBX1P83916 185 aa7.71□□□□□ -1.17
CHD2-221ENST00000635856 DNAJC5BQ9UF47 199 aa7.71□□□□□ -1.17
CHD2-221ENST00000635856 MCCP23508 829 aa7.71□□□□□ -1.18
CHD2-221ENST00000635856 ZSCAN30Q86W11 494 aa7.71□□□□□ -1.18
CHD2-221ENST00000635856 PPP1R15AO75807 674 aaPredicted RBP7.7□□□□□ -1.18
CHD2-221ENST00000635856 PHF14O94880 888 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 GRPEL1Q9HAV7 217 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 ZBED9Q6R2W3 1325 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 FOXD1Q16676 465 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 CERS3Q8IU89 383 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 KIF3AQ9Y496 699 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 CEP162Q5TB80 1403 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 LMOD3Q0VAK6 560 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 TMC1Q8TDI8 760 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 TIGD1Q96MW7 591 aa7.7□□□□□ -1.18
CHD2-221ENST00000635856 OS9Q13438 667 aaPredicted RBP7.69□□□□□ -1.18
CHD2-221ENST00000635856 SLKQ9H2G2 1235 aaPredicted RBP7.69□□□□□ -1.18
CHD2-221ENST00000635856 CALRP27797 417 aaKnown RBP7.69□□□□□ -1.18
CHD2-221ENST00000635856 P3H3Q8IVL6 736 aa7.69□□□□□ -1.18
CHD2-221ENST00000635856 CCDC173Q0VFZ6 552 aa7.69□□□□□ -1.18
CHD2-221ENST00000635856 MYCNP04198 464 aaPredicted RBP7.68□□□□□ -1.18
CHD2-221ENST00000635856 DHX57Q6P158 1386 aaKnown RBP7.68□□□□□ -1.18
CHD2-221ENST00000635856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.68□□□□□ -1.18
CHD2-221ENST00000635856 PANK2Q9BZ23 570 aa7.68□□□□□ -1.18
CHD2-221ENST00000635856 NUDCQ9Y266 331 aa7.68□□□□□ -1.18
CHD2-221ENST00000635856 BANK1Q8NDB2 785 aa7.67□□□□□ -1.18
CHD2-221ENST00000635856 PSMD1Q99460 953 aa7.67□□□□□ -1.18
CHD2-221ENST00000635856 CALCOCO1Q9P1Z2 691 aa7.67□□□□□ -1.18
CHD2-221ENST00000635856 HIRIP3Q9BW71 556 aaPredicted RBP7.67□□□□□ -1.18
CHD2-221ENST00000635856 NBPF1Q3BBV0 1214 aa7.67□□□□□ -1.18
CHD2-221ENST00000635856 ZSCAN20P17040 1043 aaPredicted RBP7.67□□□□□ -1.18
CHD2-221ENST00000635856 SASS6Q6UVJ0 657 aa7.67□□□□□ -1.18
CHD2-221ENST00000635856 ZNF592Q92610 1267 aa7.67□□□□□ -1.18
CHD2-221ENST00000635856 TRIM6-TRIM34B2RNG4 842 aa7.66□□□□□ -1.18
CHD2-221ENST00000635856 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
CHD2-221ENST00000635856 DDX11L8A8MPP1 907 aa7.66□□□□□ -1.18
CHD2-221ENST00000635856 FAM161AQ3B820 660 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms