RNA–Protein interactions for RNA: ENST00000635702.1

LINC01709-202, Transcript of long intergenic non-protein coding RNA 1709, humanhuman

TSL 5 BASIC

Gene LINC01709, Length 1,204 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01709-202ENST00000635702 PHF8Q9UPP1 1060 aa14.84□□□□□ -0.03
LINC01709-202ENST00000635702 ZNF687Q8N1G0 1237 aa14.83□□□□□ -0.04
LINC01709-202ENST00000635702 VGFO15240 615 aaPredicted RBP14.81□□□□□ -0.04
LINC01709-202ENST00000635702 RNF166Q96A37 237 aaPredicted RBP14.81□□□□□ -0.04
LINC01709-202ENST00000635702 MYT1LQ9UL68 1186 aa14.75□□□□□ -0.05
LINC01709-202ENST00000635702 ARSIQ5FYB1 569 aa14.72□□□□□ -0.05
LINC01709-202ENST00000635702 FBXO22Q8NEZ5 403 aa14.72□□□□□ -0.05
LINC01709-202ENST00000635702 NLRP6P59044 892 aa14.67□□□□□ -0.06
LINC01709-202ENST00000635702 KHSRPQ92945 711 aaKnown RBP eCLIP14.67□□□□□ -0.06
LINC01709-202ENST00000635702 ZNF316A6NFI3 1004 aaPredicted RBP14.65□□□□□ -0.06
LINC01709-202ENST00000635702 PTGER2P43116 358 aa14.64□□□□□ -0.07
LINC01709-202ENST00000635702 BCL11BQ9C0K0 894 aaPredicted RBP14.63□□□□□ -0.07
LINC01709-202ENST00000635702 KIF3CO14782 793 aa14.62□□□□□ -0.07
LINC01709-202ENST00000635702 MFRPQ9BY79 579 aa14.61□□□□□ -0.07
LINC01709-202ENST00000635702 ANKRD13DQ6ZTN6 518 aa14.57□□□□□ -0.08
LINC01709-202ENST00000635702 LSM11P83369 360 aaKnown RBP eCLIP14.56□□□□□ -0.08
LINC01709-202ENST00000635702 C2orf72A6NCS6 295 aa14.55□□□□□ -0.08
LINC01709-202ENST00000635702 STK24Q9Y6E0 443 aa14.55□□□□□ -0.08
LINC01709-202ENST00000635702 TAOK2Q9UL54 1235 aa14.52□□□□□ -0.09
LINC01709-202ENST00000635702 POTEEQ6S8J3 1075 aa14.51□□□□□ -0.09
LINC01709-202ENST00000635702 NUDT7P0C024 238 aa14.49□□□□□ -0.09
LINC01709-202ENST00000635702 SLC34A2O95436 690 aa14.48□□□□□ -0.09
LINC01709-202ENST00000635702 STK25O00506 426 aa14.46□□□□□ -0.09
LINC01709-202ENST00000635702 PBX2P40425 430 aa14.46□□□□□ -0.09
LINC01709-202ENST00000635702 LHX6Q9UPM6 363 aa14.45□□□□□ -0.1
LINC01709-202ENST00000635702 PCDHGA4Q9Y5G9 962 aa14.45□□□□□ -0.1
LINC01709-202ENST00000635702 AXIN2Q9Y2T1 843 aa14.41□□□□□ -0.1
LINC01709-202ENST00000635702 ECM2O94769 699 aaPredicted RBP14.36□□□□□ -0.11
LINC01709-202ENST00000635702 KDM4FA0A1W2PPD8 638 aa14.35□□□□□ -0.11
LINC01709-202ENST00000635702 TMC2Q8TDI7 906 aa14.34□□□□□ -0.11
LINC01709-202ENST00000635702 RGL2O15211 777 aa14.33□□□□□ -0.12
LINC01709-202ENST00000635702 PPP1R37O75864 691 aa14.33□□□□□ -0.12
LINC01709-202ENST00000635702 PKD2Q13563 968 aa14.31□□□□□ -0.12
LINC01709-202ENST00000635702 ARHGAP33O14559 1287 aa14.28□□□□□ -0.12
LINC01709-202ENST00000635702 ADGRD1Q6QNK2 874 aa14.28□□□□□ -0.12
LINC01709-202ENST00000635702 PTCD2Q8WV60 388 aaKnown RBP14.26□□□□□ -0.13
LINC01709-202ENST00000635702 HCSTQ9UBK5 93 aa14.26□□□□□ -0.13
LINC01709-202ENST00000635702 PSDA5PKW4 1024 aaPredicted RBP14.25□□□□□ -0.13
LINC01709-202ENST00000635702 PLA2G2EQ9NZK7 142 aa14.25□□□□□ -0.13
LINC01709-202ENST00000635702 HRO43593 1189 aa14.22□□□□□ -0.13
LINC01709-202ENST00000635702 TK2O00142 265 aa14.21□□□□□ -0.13
LINC01709-202ENST00000635702 DMRTA1Q5VZB9 504 aa14.2□□□□□ -0.14
LINC01709-202ENST00000635702 FOXK1P85037 733 aa14.19□□□□□ -0.14
LINC01709-202ENST00000635702 PSEN2P49810 448 aa14.17□□□□□ -0.14
LINC01709-202ENST00000635702 PLPP6Q8IY26 295 aa14.15□□□□□ -0.14
LINC01709-202ENST00000635702 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
LINC01709-202ENST00000635702 DSG2Q14126 1118 aa14.1□□□□□ -0.15
LINC01709-202ENST00000635702 PPP4R3BQ5MIZ7 849 aa14.09□□□□□ -0.15
LINC01709-202ENST00000635702 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
LINC01709-202ENST00000635702 KCTD12Q96CX2 325 aaKnown RBP14.04□□□□□ -0.16
LINC01709-202ENST00000635702 TBC1D12O60347 775 aa14.02□□□□□ -0.17
LINC01709-202ENST00000635702 OXER1Q8TDS5 423 aa14□□□□□ -0.17
LINC01709-202ENST00000635702 KCNK17Q96T54 332 aa14□□□□□ -0.17
LINC01709-202ENST00000635702 VPS9D1Q9Y2B5 631 aa13.99□□□□□ -0.17
LINC01709-202ENST00000635702 SLC4A5Q9BY07 1137 aa13.94□□□□□ -0.18
LINC01709-202ENST00000635702 KCNH8Q96L42 1107 aa13.92□□□□□ -0.18
LINC01709-202ENST00000635702 STAC3Q96MF2 364 aa13.92□□□□□ -0.18
LINC01709-202ENST00000635702 CRISPLD2Q9H0B8 497 aa13.92□□□□□ -0.18
LINC01709-202ENST00000635702 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
LINC01709-202ENST00000635702 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
LINC01709-202ENST00000635702 BHMG1C9JSJ3 638 aaPredicted RBP13.89□□□□□ -0.19
LINC01709-202ENST00000635702 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
LINC01709-202ENST00000635702 ZNF454Q8N9F8 522 aa13.89□□□□□ -0.19
LINC01709-202ENST00000635702 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC01709-202ENST00000635702 FOSBP53539 338 aa13.88□□□□□ -0.19
LINC01709-202ENST00000635702 PTPN5P54829 565 aa13.87□□□□□ -0.19
LINC01709-202ENST00000635702 IFFO2Q5TF58 517 aa13.87□□□□□ -0.19
LINC01709-202ENST00000635702 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
LINC01709-202ENST00000635702 THSD4Q6ZMP0 1018 aa13.84□□□□□ -0.19
LINC01709-202ENST00000635702 ZBED2Q9BTP6 218 aa13.84□□□□□ -0.19
LINC01709-202ENST00000635702 PPP1R15BQ5SWA1 713 aa13.83□□□□□ -0.2
LINC01709-202ENST00000635702 ANO8Q9HCE9 1232 aaPredicted RBP13.83□□□□□ -0.2
LINC01709-202ENST00000635702 RGS20O76081 388 aa13.81□□□□□ -0.2
LINC01709-202ENST00000635702 PTPREP23469 700 aa13.8□□□□□ -0.2
LINC01709-202ENST00000635702 NCKAP5LQ9HCH0 1330 aa13.8□□□□□ -0.2
LINC01709-202ENST00000635702 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
LINC01709-202ENST00000635702 A0A0G2JS52 829 aa13.75□□□□□ -0.21
LINC01709-202ENST00000635702 ADAM33Q9BZ11 813 aa13.75□□□□□ -0.21
LINC01709-202ENST00000635702 WNT2BQ93097 391 aa13.74□□□□□ -0.21
LINC01709-202ENST00000635702 RYDENQ9NUL5 291 aaKnown RBP13.74□□□□□ -0.21
LINC01709-202ENST00000635702 EVI5O60447 810 aa13.73□□□□□ -0.21
LINC01709-202ENST00000635702 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
LINC01709-202ENST00000635702 ZDHHC16Q969W1 377 aa13.73□□□□□ -0.21
LINC01709-202ENST00000635702 PDE4AP27815 886 aa13.71□□□□□ -0.21
LINC01709-202ENST00000635702 GOLGA8CPA6NN73 597 aa13.69□□□□□ -0.22
LINC01709-202ENST00000635702 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
LINC01709-202ENST00000635702 IRX2Q9BZI1 471 aaPredicted RBP13.66□□□□□ -0.22
LINC01709-202ENST00000635702 MFSD10Q14728 455 aa13.63□□□□□ -0.23
LINC01709-202ENST00000635702 PPP1R3GB7ZBB8 358 aa13.62□□□□□ -0.23
LINC01709-202ENST00000635702 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
LINC01709-202ENST00000635702 LARP6Q9BRS8 491 aaKnown RBP13.62□□□□□ -0.23
LINC01709-202ENST00000635702 DDX27Q96GQ7 796 aaKnown RBP13.61□□□□□ -0.23
LINC01709-202ENST00000635702 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
LINC01709-202ENST00000635702 RABGEF1Q9UJ41 708 aa13.61□□□□□ -0.23
LINC01709-202ENST00000635702 PCDHGA10Q9Y5H3 936 aa13.61□□□□□ -0.23
LINC01709-202ENST00000635702 ITGBL1O95965 494 aaPredicted RBP13.59□□□□□ -0.23
LINC01709-202ENST00000635702 COL9A1P20849 921 aa13.59□□□□□ -0.23
LINC01709-202ENST00000635702 PROX2Q3B8N5 592 aa13.59□□□□□ -0.23
LINC01709-202ENST00000635702 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
LINC01709-202ENST00000635702 ANKK1Q8NFD2 765 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms