RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
UBE3A-220ENST00000630424 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
UBE3A-220ENST00000630424 PLCB2Q00722 1185 aa18.13■□□□□ 0.49
UBE3A-220ENST00000630424 U2AF1L5P0DN76 240 aaPredicted RBP18.11■□□□□ 0.49
UBE3A-220ENST00000630424 U2AF1Q01081 240 aaKnown RBP eCLIP18.11■□□□□ 0.492e-7■■■■□ 25
UBE3A-220ENST00000630424 APBB1O00213 710 aa18.11■□□□□ 0.49
UBE3A-220ENST00000630424 NUP155O75694 1391 aa18.09■□□□□ 0.49
UBE3A-220ENST00000630424 NUTM2DQ5VT03 806 aaPredicted RBP18.09■□□□□ 0.49
UBE3A-220ENST00000630424 SOGA1O94964 1423 aa18.09■□□□□ 0.49
UBE3A-220ENST00000630424 NUTM2FA1L443 756 aa18.08■□□□□ 0.49
UBE3A-220ENST00000630424 NGDNQ8NEJ9 315 aaKnown RBP18.08■□□□□ 0.49
UBE3A-220ENST00000630424 TMX4Q9H1E5 349 aaPredicted RBP18.08■□□□□ 0.48
UBE3A-220ENST00000630424 WASHC2CQ9Y4E1 1318 aa18.08■□□□□ 0.48
UBE3A-220ENST00000630424 HSP90AB1P08238 724 aaKnown RBP18.07■□□□□ 0.48
UBE3A-220ENST00000630424 CLSTN1O94985 981 aa18.07■□□□□ 0.48
UBE3A-220ENST00000630424 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
UBE3A-220ENST00000630424 GOLGA6L4A6NEF3 574 aa18.06■□□□□ 0.48
UBE3A-220ENST00000630424 DNTTIP2Q5QJE6 756 aaKnown RBP18.05■□□□□ 0.48
UBE3A-220ENST00000630424 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.485e-8■■■■□ 26.4
UBE3A-220ENST00000630424 SPAG9O60271 1321 aaKnown RBP18.04■□□□□ 0.48
UBE3A-220ENST00000630424 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
UBE3A-220ENST00000630424 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
UBE3A-220ENST00000630424 PPP4R2Q9NY27 417 aa18.03■□□□□ 0.48
UBE3A-220ENST00000630424 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
UBE3A-220ENST00000630424 GLIPR1L2Q4G1C9 344 aa18.03■□□□□ 0.48
UBE3A-220ENST00000630424 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
UBE3A-220ENST00000630424 LTV1Q96GA3 475 aaPredicted RBP18.01■□□□□ 0.47
UBE3A-220ENST00000630424 ARHGAP35Q9NRY4 1499 aa18■□□□□ 0.47
UBE3A-220ENST00000630424 TIMELESSQ9UNS1 1208 aa18■□□□□ 0.47
UBE3A-220ENST00000630424 ANKRD30AQ9BXX3 1397 aa18■□□□□ 0.47
UBE3A-220ENST00000630424 KANK4Q5T7N3 995 aaPredicted RBP18■□□□□ 0.47
UBE3A-220ENST00000630424 MCCP23508 829 aa17.99■□□□□ 0.47
UBE3A-220ENST00000630424 CALD1Q05682 793 aaKnown RBP17.99■□□□□ 0.47
UBE3A-220ENST00000630424 B4GALNT3Q6L9W6 998 aa17.99■□□□□ 0.47
UBE3A-220ENST00000630424 TERF2IPQ9NYB0 399 aa17.99■□□□□ 0.47
UBE3A-220ENST00000630424 CHMP3Q9Y3E7 222 aa17.99■□□□□ 0.47
UBE3A-220ENST00000630424 ROCK2O75116 1388 aaKnown RBP17.99■□□□□ 0.47
UBE3A-220ENST00000630424 MPHOSPH9Q99550 1183 aa17.99■□□□□ 0.47
UBE3A-220ENST00000630424 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
UBE3A-220ENST00000630424 GORABQ5T7V8 394 aa17.98■□□□□ 0.47
UBE3A-220ENST00000630424 KTN1Q86UP2 1357 aaKnown RBP17.98■□□□□ 0.47
UBE3A-220ENST00000630424 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
UBE3A-220ENST00000630424 AMPHP49418 695 aa17.98■□□□□ 0.47
UBE3A-220ENST00000630424 SETD5Q9C0A6 1442 aa17.97■□□□□ 0.47
UBE3A-220ENST00000630424 GTF2E1P29083 439 aaPredicted RBP17.97■□□□□ 0.47
UBE3A-220ENST00000630424 TAF7LQ5H9L4 462 aa17.97■□□□□ 0.47
UBE3A-220ENST00000630424 KIAA1211Q6ZU35 1233 aa17.96■□□□□ 0.47
UBE3A-220ENST00000630424 CHMP4AQ9BY43 222 aa17.96■□□□□ 0.47
UBE3A-220ENST00000630424 GNL2Q13823 731 aaKnown RBP17.96■□□□□ 0.46
UBE3A-220ENST00000630424 G3V3G9 751 aa17.95■□□□□ 0.46
UBE3A-220ENST00000630424 DCAF8Q5TAQ9 597 aa17.95■□□□□ 0.46
UBE3A-220ENST00000630424 NRDCO43847 1150 aa17.94■□□□□ 0.46
UBE3A-220ENST00000630424 FMN1Q68DA7 1419 aa17.93■□□□□ 0.46
UBE3A-220ENST00000630424 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
UBE3A-220ENST00000630424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.93■□□□□ 0.462e-6■■■□□ 17.3
UBE3A-220ENST00000630424 GOLGA6L6A8MZA4 724 aa17.92■□□□□ 0.46
UBE3A-220ENST00000630424 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
UBE3A-220ENST00000630424 TRAK1Q9UPV9 953 aa17.91■□□□□ 0.46
UBE3A-220ENST00000630424 RSPH4AQ5TD94 716 aa17.9■□□□□ 0.46
UBE3A-220ENST00000630424 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
UBE3A-220ENST00000630424 SLC4A10Q6U841 1118 aa17.88■□□□□ 0.45
UBE3A-220ENST00000630424 SPRYD3Q8NCJ5 442 aa17.88■□□□□ 0.45
UBE3A-220ENST00000630424 EIF3AQ14152 1382 aaKnown RBP17.88■□□□□ 0.45
UBE3A-220ENST00000630424 VPS8Q8N3P4 1428 aa17.88■□□□□ 0.45
UBE3A-220ENST00000630424 FRAT2O75474 233 aaPredicted RBP17.87■□□□□ 0.45
UBE3A-220ENST00000630424 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
UBE3A-220ENST00000630424 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
UBE3A-220ENST00000630424 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
UBE3A-220ENST00000630424 HDAC5Q9UQL6 1122 aa17.86■□□□□ 0.45
UBE3A-220ENST00000630424 SMC4Q9NTJ3 1288 aa17.84■□□□□ 0.45
UBE3A-220ENST00000630424 MSH5O43196 834 aa17.84■□□□□ 0.45
UBE3A-220ENST00000630424 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
UBE3A-220ENST00000630424 EVA1CP58658 441 aa17.83■□□□□ 0.45
UBE3A-220ENST00000630424 RALBP1Q15311 655 aa17.83■□□□□ 0.45
UBE3A-220ENST00000630424 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
UBE3A-220ENST00000630424 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
UBE3A-220ENST00000630424 RWDD1Q9H446 243 aaPredicted RBP17.82■□□□□ 0.44
UBE3A-220ENST00000630424 CLUAP1Q96AJ1 413 aa17.81■□□□□ 0.44
UBE3A-220ENST00000630424 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
UBE3A-220ENST00000630424 CCER2I3L3R5 266 aa17.8■□□□□ 0.44
UBE3A-220ENST00000630424 RCAN3Q9UKA8 241 aa17.8■□□□□ 0.44
UBE3A-220ENST00000630424 FHOD3Q2V2M9 1422 aa17.8■□□□□ 0.44
UBE3A-220ENST00000630424 CCDC146Q8IYE0 955 aa17.79■□□□□ 0.44
UBE3A-220ENST00000630424 HMMRO75330 724 aa17.79■□□□□ 0.44
UBE3A-220ENST00000630424 TRIM6-TRIM34B2RNG4 842 aa17.79■□□□□ 0.44
UBE3A-220ENST00000630424 LMOD3Q0VAK6 560 aa17.79■□□□□ 0.44
UBE3A-220ENST00000630424 TOMM22Q9NS69 142 aa17.78■□□□□ 0.44
UBE3A-220ENST00000630424 GPATCH3Q96I76 525 aa17.78■□□□□ 0.44
UBE3A-220ENST00000630424 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
UBE3A-220ENST00000630424 ERICH6BQ5W0A0 696 aa17.78■□□□□ 0.44
UBE3A-220ENST00000630424 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
UBE3A-220ENST00000630424 VGFO15240 615 aaPredicted RBP17.77■□□□□ 0.43
UBE3A-220ENST00000630424 AMER1Q5JTC6 1135 aaPredicted RBP17.77■□□□□ 0.43
UBE3A-220ENST00000630424 DRC7Q8IY82 874 aa17.76■□□□□ 0.43
UBE3A-220ENST00000630424 PTPRGP23470 1445 aa17.76■□□□□ 0.43
UBE3A-220ENST00000630424 NOP58Q9Y2X3 529 aaKnown RBP17.75■□□□□ 0.43
UBE3A-220ENST00000630424 CCDC18Q5T9S5 1454 aa17.74■□□□□ 0.43
UBE3A-220ENST00000630424 ELL2O00472 640 aaPredicted RBP17.74■□□□□ 0.43
UBE3A-220ENST00000630424 C1orf141Q5JVX7 400 aa17.74■□□□□ 0.43
UBE3A-220ENST00000630424 COG3Q96JB2 828 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms