RNA–Protein interactions for RNA: ENST00000628890.1

UBE3A-217, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 424 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-217ENST00000628890 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
UBE3A-217ENST00000628890 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
UBE3A-217ENST00000628890 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
UBE3A-217ENST00000628890 GPR153Q6NV75 609 aa12.29□□□□□ -0.44
UBE3A-217ENST00000628890 PKD2Q13563 968 aa12.28□□□□□ -0.44
UBE3A-217ENST00000628890 MFRPQ9BY79 579 aa12.28□□□□□ -0.44
UBE3A-217ENST00000628890 STK24Q9Y6E0 443 aa12.27□□□□□ -0.45
UBE3A-217ENST00000628890 ERBB3P21860 1342 aa12.27□□□□□ -0.45
UBE3A-217ENST00000628890 ECM2O94769 699 aaPredicted RBP12.26□□□□□ -0.45
UBE3A-217ENST00000628890 STK25O00506 426 aa12.23□□□□□ -0.45
UBE3A-217ENST00000628890 KIF3CO14782 793 aa12.21□□□□□ -0.45
UBE3A-217ENST00000628890 RGL2O15211 777 aa12.21□□□□□ -0.45
UBE3A-217ENST00000628890 VARS2Q5ST30 1063 aaKnown RBP12.19□□□□□ -0.46
UBE3A-217ENST00000628890 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
UBE3A-217ENST00000628890 ARSIQ5FYB1 569 aa12.16□□□□□ -0.46
UBE3A-217ENST00000628890 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
UBE3A-217ENST00000628890 SLC34A2O95436 690 aa12.1□□□□□ -0.47
UBE3A-217ENST00000628890 ZNF316A6NFI3 1004 aaPredicted RBP12.08□□□□□ -0.48
UBE3A-217ENST00000628890 KHSRPQ92945 711 aaKnown RBP eCLIP12.08□□□□□ -0.483e-8■■□□□ 14.1
UBE3A-217ENST00000628890 PPP1R37O75864 691 aa12.05□□□□□ -0.48
UBE3A-217ENST00000628890 TMC2Q8TDI7 906 aa12□□□□□ -0.49
UBE3A-217ENST00000628890 RNF166Q96A37 237 aaPredicted RBP12□□□□□ -0.49
UBE3A-217ENST00000628890 PCDHGA4Q9Y5G9 962 aa12□□□□□ -0.49
UBE3A-217ENST00000628890 PTGER2P43116 358 aa11.99□□□□□ -0.49
UBE3A-217ENST00000628890 MYT1LQ9UL68 1186 aa11.99□□□□□ -0.49
UBE3A-217ENST00000628890 NUDT7P0C024 238 aa11.98□□□□□ -0.49
UBE3A-217ENST00000628890 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
UBE3A-217ENST00000628890 KDM4FA0A1W2PPD8 638 aa11.95□□□□□ -0.5
UBE3A-217ENST00000628890 LHX6Q9UPM6 363 aa11.95□□□□□ -0.5
UBE3A-217ENST00000628890 PBX2P40425 430 aa11.94□□□□□ -0.5
UBE3A-217ENST00000628890 LSM11P83369 360 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBE3A-217ENST00000628890 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
UBE3A-217ENST00000628890 POTEEQ6S8J3 1075 aa11.93□□□□□ -0.5
UBE3A-217ENST00000628890 FOXK1P85037 733 aa11.92□□□□□ -0.5
UBE3A-217ENST00000628890 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
UBE3A-217ENST00000628890 PTCD2Q8WV60 388 aaKnown RBP11.92□□□□□ -0.5
UBE3A-217ENST00000628890 GPHNQ9NQX3 736 aaPredicted RBP11.9□□□□□ -0.5
UBE3A-217ENST00000628890 PSDA5PKW4 1024 aaPredicted RBP11.86□□□□□ -0.51
UBE3A-217ENST00000628890 PLPP6Q8IY26 295 aa11.85□□□□□ -0.51
UBE3A-217ENST00000628890 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
UBE3A-217ENST00000628890 DSG2Q14126 1118 aa11.83□□□□□ -0.52
UBE3A-217ENST00000628890 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
UBE3A-217ENST00000628890 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
UBE3A-217ENST00000628890 ARHGAP33O14559 1287 aa11.81□□□□□ -0.52
UBE3A-217ENST00000628890 TBC1D12O60347 775 aa11.77□□□□□ -0.53
UBE3A-217ENST00000628890 RYDENQ9NUL5 291 aaKnown RBP11.77□□□□□ -0.53
UBE3A-217ENST00000628890 TK2O00142 265 aa11.75□□□□□ -0.53
UBE3A-217ENST00000628890 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
UBE3A-217ENST00000628890 ADGRD1Q6QNK2 874 aa11.74□□□□□ -0.53
UBE3A-217ENST00000628890 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
UBE3A-217ENST00000628890 HRO43593 1189 aa11.71□□□□□ -0.53
UBE3A-217ENST00000628890 PPP4R3BQ5MIZ7 849 aa11.7□□□□□ -0.54
UBE3A-217ENST00000628890 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
UBE3A-217ENST00000628890 PSEN2P49810 448 aa11.69□□□□□ -0.54
UBE3A-217ENST00000628890 HCSTQ9UBK5 93 aa11.67□□□□□ -0.54
UBE3A-217ENST00000628890 NCKAP5LQ9HCH0 1330 aa11.66□□□□□ -0.54
UBE3A-217ENST00000628890 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
UBE3A-217ENST00000628890 PDE4AP27815 886 aa11.64□□□□□ -0.55
UBE3A-217ENST00000628890 PPP1R15BQ5SWA1 713 aa11.64□□□□□ -0.55
UBE3A-217ENST00000628890 ANO8Q9HCE9 1232 aaPredicted RBP11.64□□□□□ -0.55
UBE3A-217ENST00000628890 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
UBE3A-217ENST00000628890 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
UBE3A-217ENST00000628890 BCL2L12Q9HB09 334 aa11.59□□□□□ -0.55
UBE3A-217ENST00000628890 FOSBP53539 338 aa11.58□□□□□ -0.56
UBE3A-217ENST00000628890 KCNK17Q96T54 332 aa11.58□□□□□ -0.56
UBE3A-217ENST00000628890 VPS9D1Q9Y2B5 631 aa11.58□□□□□ -0.56
UBE3A-217ENST00000628890 MFSD10Q14728 455 aa11.56□□□□□ -0.56
UBE3A-217ENST00000628890 ZNF454Q8N9F8 522 aa11.56□□□□□ -0.56
UBE3A-217ENST00000628890 PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
UBE3A-217ENST00000628890 KCNH8Q96L42 1107 aa11.55□□□□□ -0.56
UBE3A-217ENST00000628890 BHMG1C9JSJ3 638 aaPredicted RBP11.53□□□□□ -0.56
UBE3A-217ENST00000628890 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
UBE3A-217ENST00000628890 EVI5O60447 810 aa11.52□□□□□ -0.57
UBE3A-217ENST00000628890 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
UBE3A-217ENST00000628890 JPH4Q96JJ6 628 aa11.52□□□□□ -0.57
UBE3A-217ENST00000628890 KCTD12Q96CX2 325 aaKnown RBP11.5□□□□□ -0.57
UBE3A-217ENST00000628890 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
UBE3A-217ENST00000628890 PTPREP23469 700 aa11.49□□□□□ -0.57
UBE3A-217ENST00000628890 ZBED2Q9BTP6 218 aa11.49□□□□□ -0.57
UBE3A-217ENST00000628890 ZDHHC16Q969W1 377 aa11.47□□□□□ -0.57
UBE3A-217ENST00000628890 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
UBE3A-217ENST00000628890 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
UBE3A-217ENST00000628890 ADAM33Q9BZ11 813 aa11.46□□□□□ -0.57
UBE3A-217ENST00000628890 CADPS2Q86UW7 1296 aa11.43□□□□□ -0.58
UBE3A-217ENST00000628890 IFFO2Q5TF58 517 aa11.4□□□□□ -0.58
UBE3A-217ENST00000628890 PCDHGA10Q9Y5H3 936 aa11.4□□□□□ -0.58
UBE3A-217ENST00000628890 CAMK2BQ13554 666 aa11.39□□□□□ -0.59
UBE3A-217ENST00000628890 THSD4Q6ZMP0 1018 aa11.39□□□□□ -0.59
UBE3A-217ENST00000628890 PTPN5P54829 565 aa11.37□□□□□ -0.59
UBE3A-217ENST00000628890 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
UBE3A-217ENST00000628890 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
UBE3A-217ENST00000628890 PHF14O94880 888 aa11.35□□□□□ -0.59
UBE3A-217ENST00000628890 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
UBE3A-217ENST00000628890 WNT2BQ93097 391 aa11.34□□□□□ -0.59
UBE3A-217ENST00000628890 FBXW7Q969H0 707 aa11.34□□□□□ -0.59
UBE3A-217ENST00000628890 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
UBE3A-217ENST00000628890 NBPF3Q9H094 633 aa11.33□□□□□ -0.6
UBE3A-217ENST00000628890 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
UBE3A-217ENST00000628890 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
UBE3A-217ENST00000628890 COL9A1P20849 921 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms