RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 ITSN2Q9NZM3 1697 aa10.39□□□□□ -0.75
CTNNA1-244ENST00000627109 SYNJ2O15056 1496 aa10.38□□□□□ -0.75
CTNNA1-244ENST00000627109 KDM6BO15054 1643 aa10.38□□□□□ -0.75
CTNNA1-244ENST00000627109 NUP153P49790 1475 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-244ENST00000627109 CDK13Q14004 1512 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-244ENST00000627109 POLR1AO95602 1720 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-244ENST00000627109 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
CTNNA1-244ENST00000627109 NPM1P06748 294 aaKnown RBP eCLIP10.36□□□□□ -0.75
CTNNA1-244ENST00000627109 ROCK1Q13464 1354 aa10.36□□□□□ -0.75
CTNNA1-244ENST00000627109 NUP160Q12769 1436 aa10.36□□□□□ -0.75
CTNNA1-244ENST00000627109 TRHP20396 242 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-244ENST00000627109 FAM50AQ14320 339 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-244ENST00000627109 PPP1R15AO75807 674 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-244ENST00000627109 ABCA8O94911 1581 aa10.33□□□□□ -0.76
CTNNA1-244ENST00000627109 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
CTNNA1-244ENST00000627109 PRG4Q92954 1404 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-244ENST00000627109 KCNH8Q96L42 1107 aa10.31□□□□□ -0.76
CTNNA1-244ENST00000627109 DAPK1P53355 1430 aa10.3□□□□□ -0.76
CTNNA1-244ENST00000627109 CDC42BPAQ5VT25 1732 aa10.3□□□□□ -0.76
CTNNA1-244ENST00000627109 CARMIL2Q6F5E8 1435 aa10.29□□□□□ -0.76
CTNNA1-244ENST00000627109 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
CTNNA1-244ENST00000627109 SIN3AQ96ST3 1273 aa10.28□□□□□ -0.76
CTNNA1-244ENST00000627109 ABCC5O15440 1437 aa10.28□□□□□ -0.76
CTNNA1-244ENST00000627109 KIF14Q15058 1648 aa10.28□□□□□ -0.76
CTNNA1-244ENST00000627109 SHROOM2Q13796 1616 aa10.28□□□□□ -0.76
CTNNA1-244ENST00000627109 TROQ12816 1431 aaPredicted RBP10.27□□□□□ -0.76
CTNNA1-244ENST00000627109 PTPRGP23470 1445 aa10.27□□□□□ -0.77
CTNNA1-244ENST00000627109 KDM5DQ9BY66 1539 aa10.26□□□□□ -0.77
CTNNA1-244ENST00000627109 TEX14Q8IWB6 1497 aa10.26□□□□□ -0.77
CTNNA1-244ENST00000627109 SHANK2Q9UPX8 1470 aa10.26□□□□□ -0.77
CTNNA1-244ENST00000627109 PODXL2Q9NZ53 605 aa10.26□□□□□ -0.77
CTNNA1-244ENST00000627109 ABCC10Q5T3U5 1492 aa10.25□□□□□ -0.77
CTNNA1-244ENST00000627109 CAMSAP2Q08AD1 1489 aa10.25□□□□□ -0.77
CTNNA1-244ENST00000627109 RPRD2Q5VT52 1461 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-244ENST00000627109 MBD5Q9P267 1494 aa10.24□□□□□ -0.77
CTNNA1-244ENST00000627109 GPATCH8Q9UKJ3 1502 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-244ENST00000627109 ARHGEF5Q12774 1597 aa10.24□□□□□ -0.77
CTNNA1-244ENST00000627109 PZPP20742 1482 aa10.23□□□□□ -0.77
CTNNA1-244ENST00000627109 CHD1O14646 1710 aa10.22□□□□□ -0.77
CTNNA1-244ENST00000627109 EIF5BO60841 1220 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-244ENST00000627109 ANKRD30BQ9BXX2 1392 aa10.22□□□□□ -0.77
CTNNA1-244ENST00000627109 CCER2I3L3R5 266 aa10.22□□□□□ -0.77
CTNNA1-244ENST00000627109 TONSLQ96HA7 1378 aa10.22□□□□□ -0.77
CTNNA1-244ENST00000627109 PLB1Q6P1J6 1458 aa10.21□□□□□ -0.78
CTNNA1-244ENST00000627109 PREX2Q70Z35 1606 aa10.21□□□□□ -0.78
CTNNA1-244ENST00000627109 MAST1Q9Y2H9 1570 aa10.19□□□□□ -0.78
CTNNA1-244ENST00000627109 PLEKHD1A6NEE1 506 aa10.19□□□□□ -0.78
CTNNA1-244ENST00000627109 NCOA1Q15788 1441 aa10.19□□□□□ -0.78
CTNNA1-244ENST00000627109 CDC42BPBQ9Y5S2 1711 aa10.19□□□□□ -0.78
CTNNA1-244ENST00000627109 MYT1LQ9UL68 1186 aa10.19□□□□□ -0.78
CTNNA1-244ENST00000627109 SPATA31E1Q6ZUB1 1445 aa10.19□□□□□ -0.78
CTNNA1-244ENST00000627109 CDK11AQ9UQ88 783 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-244ENST00000627109 ATP10BO94823 1461 aa10.17□□□□□ -0.78
CTNNA1-244ENST00000627109 ZNF777Q9ULD5 760 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-244ENST00000627109 HAP1P54257 671 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-244ENST00000627109 MPHOSPH9Q99550 1183 aa10.15□□□□□ -0.78
CTNNA1-244ENST00000627109 ARHGEF12Q9NZN5 1544 aa10.15□□□□□ -0.79
CTNNA1-244ENST00000627109 FAM69CQ0P6D2 419 aa10.15□□□□□ -0.79
CTNNA1-244ENST00000627109 UNC13BO14795 1591 aa10.14□□□□□ -0.79
CTNNA1-244ENST00000627109 SAMD9LQ8IVG5 1584 aa10.14□□□□□ -0.79
CTNNA1-244ENST00000627109 ERCC6L2Q5T890 1561 aa10.14□□□□□ -0.79
CTNNA1-244ENST00000627109 KDM5CP41229 1560 aa10.14□□□□□ -0.79
CTNNA1-244ENST00000627109 UHRF1BP1Q6BDS2 1440 aa10.13□□□□□ -0.79
CTNNA1-244ENST00000627109 PLXNC1O60486 1568 aa10.13□□□□□ -0.79
CTNNA1-244ENST00000627109 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
CTNNA1-244ENST00000627109 RRP7BPQ9NSQ0 103 aa10.12□□□□□ -0.79
CTNNA1-244ENST00000627109 KIAA1107Q9UPP5 1409 aa10.12□□□□□ -0.79
CTNNA1-244ENST00000627109 SUPT16HQ9Y5B9 1047 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-244ENST00000627109 CNTLNQ9NXG0 1405 aa10.11□□□□□ -0.79
CTNNA1-244ENST00000627109 E9PCH4 1651 aa10.11□□□□□ -0.79
CTNNA1-244ENST00000627109 DDX10Q13206 875 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-244ENST00000627109 LAMC1P11047 1609 aa10.11□□□□□ -0.79
CTNNA1-244ENST00000627109 BCORL1Q5H9F3 1711 aa10.1□□□□□ -0.79
CTNNA1-244ENST00000627109 TAOK2Q9UL54 1235 aa10.1□□□□□ -0.79
CTNNA1-244ENST00000627109 MYO5CQ9NQX4 1742 aa10.1□□□□□ -0.79
CTNNA1-244ENST00000627109 ZNF644Q9H582 1327 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-244ENST00000627109 HIRIP3Q9BW71 556 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-244ENST00000627109 WASHC2AQ641Q2 1341 aa10.09□□□□□ -0.79
CTNNA1-244ENST00000627109 CLASP1Q7Z460 1538 aa10.09□□□□□ -0.79
CTNNA1-244ENST00000627109 MAGI2Q86UL8 1455 aa10.09□□□□□ -0.79
CTNNA1-244ENST00000627109 IQGAP3Q86VI3 1631 aa10.08□□□□□ -0.8
CTNNA1-244ENST00000627109 TTC37Q6PGP7 1564 aa10.08□□□□□ -0.8
CTNNA1-244ENST00000627109 C9orf84Q5VXU9 1444 aa10.08□□□□□ -0.8
CTNNA1-244ENST00000627109 ANKRD30AQ9BXX3 1397 aa10.08□□□□□ -0.8
CTNNA1-244ENST00000627109 RALGAPBQ86X10 1494 aa10.08□□□□□ -0.8
CTNNA1-244ENST00000627109 ABCC2Q92887 1545 aa10.07□□□□□ -0.8
CTNNA1-244ENST00000627109 CHIC2Q9UKJ5 165 aa10.07□□□□□ -0.8
CTNNA1-244ENST00000627109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.07□□□□□ -0.86e-6■■■■■ 38.2
CTNNA1-244ENST00000627109 ANKRD50Q9ULJ7 1429 aa10.07□□□□□ -0.8
CTNNA1-244ENST00000627109 CCDC7Q96M83 1385 aa10.06□□□□□ -0.8
CTNNA1-244ENST00000627109 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
CTNNA1-244ENST00000627109 UHRF1BP1LA0JNW5 1464 aa10.06□□□□□ -0.8
CTNNA1-244ENST00000627109 HSPA5P11021 654 aaKnown RBP10.06□□□□□ -0.8
CTNNA1-244ENST00000627109 TRPM1Q7Z4N2 1603 aa10.06□□□□□ -0.8
CTNNA1-244ENST00000627109 CCDC141Q6ZP82 1450 aa10.06□□□□□ -0.8
CTNNA1-244ENST00000627109 ANP32CO43423 234 aa10.05□□□□□ -0.8
CTNNA1-244ENST00000627109 ARAP3Q8WWN8 1544 aa10.05□□□□□ -0.8
CTNNA1-244ENST00000627109 RIMBP3CA6NJZ7 1639 aa10.04□□□□□ -0.8
CTNNA1-244ENST00000627109 RIMBP3BA6NNM3 1639 aa10.04□□□□□ -0.8
CTNNA1-244ENST00000627109 RIMBP3Q9UFD9 1639 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms