RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 HOXB1P14653 301 aaPredicted RBP13.78□□□□□ -0.2
AC004943.3-201ENST00000624116 HS6ST3Q8IZP7 471 aa13.76□□□□□ -0.21
AC004943.3-201ENST00000624116 FAM205CA6NFA0 338 aa13.75□□□□□ -0.21
AC004943.3-201ENST00000624116 HS3ST6Q96QI5 342 aa13.75□□□□□ -0.21
AC004943.3-201ENST00000624116 ERBB3P21860 1342 aa13.68□□□□□ -0.22
AC004943.3-201ENST00000624116 CHGAP10645 457 aaKnown RBP13.66□□□□□ -0.22
AC004943.3-201ENST00000624116 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
AC004943.3-201ENST00000624116 RYDENQ9NUL5 291 aaKnown RBP13.64□□□□□ -0.23
AC004943.3-201ENST00000624116 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
AC004943.3-201ENST00000624116 KIF3CO14782 793 aa13.63□□□□□ -0.23
AC004943.3-201ENST00000624116 GPR153Q6NV75 609 aa13.62□□□□□ -0.23
AC004943.3-201ENST00000624116 POTEB3A0JP26 581 aa13.61□□□□□ -0.23
AC004943.3-201ENST00000624116 POTEBQ6S5H4 581 aa13.61□□□□□ -0.23
AC004943.3-201ENST00000624116 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
AC004943.3-201ENST00000624116 SPNS2Q8IVW8 549 aa13.59□□□□□ -0.23
AC004943.3-201ENST00000624116 PPP1R37O75864 691 aa13.58□□□□□ -0.24
AC004943.3-201ENST00000624116 VARS2Q5ST30 1063 aaKnown RBP13.57□□□□□ -0.24
AC004943.3-201ENST00000624116 KRTAP3-3Q9BYR6 98 aa13.56□□□□□ -0.24
AC004943.3-201ENST00000624116 KRTAP3-2Q9BYR7 98 aa13.56□□□□□ -0.24
AC004943.3-201ENST00000624116 ARSIQ5FYB1 569 aa13.55□□□□□ -0.24
AC004943.3-201ENST00000624116 SLC34A2O95436 690 aa13.54□□□□□ -0.24
AC004943.3-201ENST00000624116 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
AC004943.3-201ENST00000624116 ZNF687Q8N1G0 1237 aa13.5□□□□□ -0.25
AC004943.3-201ENST00000624116 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
AC004943.3-201ENST00000624116 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
AC004943.3-201ENST00000624116 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
AC004943.3-201ENST00000624116 FOXK1P85037 733 aa13.45□□□□□ -0.26
AC004943.3-201ENST00000624116 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
AC004943.3-201ENST00000624116 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
AC004943.3-201ENST00000624116 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.26
AC004943.3-201ENST00000624116 NUDT7P0C024 238 aa13.42□□□□□ -0.26
AC004943.3-201ENST00000624116 PLPP6Q8IY26 295 aa13.39□□□□□ -0.27
AC004943.3-201ENST00000624116 PTCD2Q8WV60 388 aaKnown RBP13.39□□□□□ -0.27
AC004943.3-201ENST00000624116 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
AC004943.3-201ENST00000624116 TBC1D12O60347 775 aa13.36□□□□□ -0.27
AC004943.3-201ENST00000624116 PBX2P40425 430 aa13.36□□□□□ -0.27
AC004943.3-201ENST00000624116 PTGER2P43116 358 aa13.36□□□□□ -0.27
AC004943.3-201ENST00000624116 DSG2Q14126 1118 aa13.35□□□□□ -0.27
AC004943.3-201ENST00000624116 LHX6Q9UPM6 363 aa13.35□□□□□ -0.27
AC004943.3-201ENST00000624116 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
AC004943.3-201ENST00000624116 CRISPLD2Q9H0B8 497 aa13.31□□□□□ -0.28
AC004943.3-201ENST00000624116 PDE4AP27815 886 aa13.29□□□□□ -0.28
AC004943.3-201ENST00000624116 LSM11P83369 360 aaKnown RBP eCLIP13.27□□□□□ -0.29
AC004943.3-201ENST00000624116 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
AC004943.3-201ENST00000624116 RNF166Q96A37 237 aaPredicted RBP13.27□□□□□ -0.29
AC004943.3-201ENST00000624116 MYT1LQ9UL68 1186 aa13.27□□□□□ -0.29
AC004943.3-201ENST00000624116 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
AC004943.3-201ENST00000624116 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
AC004943.3-201ENST00000624116 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
AC004943.3-201ENST00000624116 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
AC004943.3-201ENST00000624116 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
AC004943.3-201ENST00000624116 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
AC004943.3-201ENST00000624116 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
AC004943.3-201ENST00000624116 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
AC004943.3-201ENST00000624116 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
AC004943.3-201ENST00000624116 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
AC004943.3-201ENST00000624116 LARP6Q9BRS8 491 aaKnown RBP13.17□□□□□ -0.3
AC004943.3-201ENST00000624116 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
AC004943.3-201ENST00000624116 POTEEQ6S8J3 1075 aa13.14□□□□□ -0.31
AC004943.3-201ENST00000624116 MFSD10Q14728 455 aa13.13□□□□□ -0.31
AC004943.3-201ENST00000624116 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
AC004943.3-201ENST00000624116 TK2O00142 265 aa13.1□□□□□ -0.31
AC004943.3-201ENST00000624116 ADGRD1Q6QNK2 874 aa13.1□□□□□ -0.31
AC004943.3-201ENST00000624116 ZNF454Q8N9F8 522 aa13.07□□□□□ -0.32
AC004943.3-201ENST00000624116 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
AC004943.3-201ENST00000624116 EVI5O60447 810 aa13.05□□□□□ -0.32
AC004943.3-201ENST00000624116 PSEN2P49810 448 aa13.04□□□□□ -0.32
AC004943.3-201ENST00000624116 KCNK17Q96T54 332 aa13.04□□□□□ -0.32
AC004943.3-201ENST00000624116 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
AC004943.3-201ENST00000624116 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
AC004943.3-201ENST00000624116 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
AC004943.3-201ENST00000624116 BCL2L12Q9HB09 334 aa13.03□□□□□ -0.32
AC004943.3-201ENST00000624116 FOSBP53539 338 aa13.01□□□□□ -0.33
AC004943.3-201ENST00000624116 DMRTA1Q5VZB9 504 aa13.01□□□□□ -0.33
AC004943.3-201ENST00000624116 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
AC004943.3-201ENST00000624116 CADPS2Q86UW7 1296 aa13□□□□□ -0.33
AC004943.3-201ENST00000624116 PTPREP23469 700 aa12.98□□□□□ -0.33
AC004943.3-201ENST00000624116 SPRYD3Q8NCJ5 442 aa12.98□□□□□ -0.33
AC004943.3-201ENST00000624116 HRO43593 1189 aa12.97□□□□□ -0.33
AC004943.3-201ENST00000624116 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
AC004943.3-201ENST00000624116 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.33
AC004943.3-201ENST00000624116 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.33
AC004943.3-201ENST00000624116 SLC4A5Q9BY07 1137 aa12.95□□□□□ -0.34
AC004943.3-201ENST00000624116 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
AC004943.3-201ENST00000624116 CAMK2BQ13554 666 aa12.93□□□□□ -0.34
AC004943.3-201ENST00000624116 VPS9D1Q9Y2B5 631 aa12.92□□□□□ -0.34
AC004943.3-201ENST00000624116 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
AC004943.3-201ENST00000624116 ADAM33Q9BZ11 813 aa12.88□□□□□ -0.35
AC004943.3-201ENST00000624116 PHF14O94880 888 aa12.87□□□□□ -0.35
AC004943.3-201ENST00000624116 PCDHGA10Q9Y5H3 936 aa12.86□□□□□ -0.35
AC004943.3-201ENST00000624116 TYW1BQ6NUM6 668 aa12.85□□□□□ -0.35
AC004943.3-201ENST00000624116 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
AC004943.3-201ENST00000624116 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
AC004943.3-201ENST00000624116 PPP1R3GB7ZBB8 358 aa12.83□□□□□ -0.36
AC004943.3-201ENST00000624116 DPYSL4O14531 572 aa12.83□□□□□ -0.36
AC004943.3-201ENST00000624116 NBPF3Q9H094 633 aa12.83□□□□□ -0.36
AC004943.3-201ENST00000624116 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
AC004943.3-201ENST00000624116 EPAS1Q99814 870 aa12.82□□□□□ -0.36
AC004943.3-201ENST00000624116 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
AC004943.3-201ENST00000624116 GOLGA8CPA6NN73 597 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms