RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 NAIPQ13075 1403 aa31.68■■■□□ 2.66
SPAST-204ENST00000621856 ABCC5O15440 1437 aa31.67■■■□□ 2.66
SPAST-204ENST00000621856 PREX2Q70Z35 1606 aa31.66■■■□□ 2.66
SPAST-204ENST00000621856 GCC2Q8IWJ2 1684 aa31.66■■■□□ 2.66
SPAST-204ENST00000621856 TTC37Q6PGP7 1564 aa31.65■■■□□ 2.66
SPAST-204ENST00000621856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.65■■■□□ 2.66
SPAST-204ENST00000621856 AKNAQ7Z591 1439 aa31.65■■■□□ 2.66
SPAST-204ENST00000621856 KCNH8Q96L42 1107 aa31.63■■■□□ 2.65
SPAST-204ENST00000621856 RRP7BPQ9NSQ0 103 aa31.63■■■□□ 2.65
SPAST-204ENST00000621856 CDC42BPBQ9Y5S2 1711 aa31.62■■■□□ 2.65
SPAST-204ENST00000621856 MYO5CQ9NQX4 1742 aa31.6■■■□□ 2.65
SPAST-204ENST00000621856 CROCC2H7BZ55 1655 aa31.59■■■□□ 2.65
SPAST-204ENST00000621856 ROCK1Q13464 1354 aa31.58■■■□□ 2.65
SPAST-204ENST00000621856 ARHGAP5Q13017 1502 aa31.55■■■□□ 2.64
SPAST-204ENST00000621856 ADGBQ8N7X0 1667 aa31.55■■■□□ 2.64
SPAST-204ENST00000621856 WDR7Q9Y4E6 1490 aa31.53■■■□□ 2.64
SPAST-204ENST00000621856 SAMD9LQ8IVG5 1584 aa31.53■■■□□ 2.64
SPAST-204ENST00000621856 MAPKBP1O60336 1514 aa31.52■■■□□ 2.64
SPAST-204ENST00000621856 NPM1P06748 294 aaKnown RBP eCLIP31.48■■■□□ 2.63
SPAST-204ENST00000621856 ARHGEF5Q12774 1597 aa31.47■■■□□ 2.63
SPAST-204ENST00000621856 KDM6BO15054 1643 aa31.46■■■□□ 2.63
SPAST-204ENST00000621856 ADGRL2O95490 1459 aa31.45■■■□□ 2.62
SPAST-204ENST00000621856 SHANK2Q9UPX8 1470 aa31.45■■■□□ 2.62
SPAST-204ENST00000621856 ASXL2Q76L83 1435 aa31.44■■■□□ 2.62
SPAST-204ENST00000621856 PLCH2O75038 1416 aa31.43■■■□□ 2.62
SPAST-204ENST00000621856 HNRNPMP52272 730 aaKnown RBP eCLIP31.43■■■□□ 2.62
SPAST-204ENST00000621856 MBD5Q9P267 1494 aa31.41■■■□□ 2.62
SPAST-204ENST00000621856 ANKRD30AQ9BXX3 1397 aa31.4■■■□□ 2.62
SPAST-204ENST00000621856 NCOA1Q15788 1441 aa31.4■■■□□ 2.62
SPAST-204ENST00000621856 C9orf84Q5VXU9 1444 aa31.4■■■□□ 2.62
SPAST-204ENST00000621856 CCDC141Q6ZP82 1450 aa31.4■■■□□ 2.62
SPAST-204ENST00000621856 PLEKHH2Q8IVE3 1493 aa31.4■■■□□ 2.62
SPAST-204ENST00000621856 SYCP2Q9BX26 1530 aa31.39■■■□□ 2.62
SPAST-204ENST00000621856 TSPY4P0CV99 314 aa31.38■■■□□ 2.61
SPAST-204ENST00000621856 TSPY10P0CW01 314 aa31.38■■■□□ 2.61
SPAST-204ENST00000621856 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
SPAST-204ENST00000621856 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
SPAST-204ENST00000621856 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
SPAST-204ENST00000621856 RSPH4AQ5TD94 716 aa31.36■■■□□ 2.61
SPAST-204ENST00000621856 EFCAB2Q5VUJ9 269 aa31.36■■■□□ 2.61
SPAST-204ENST00000621856 TRIM52Q96A61 297 aa31.36■■■□□ 2.61
SPAST-204ENST00000621856 ABCA9Q8IUA7 1624 aa31.36■■■□□ 2.61
SPAST-204ENST00000621856 ACIN1Q9UKV3 1341 aaKnown RBP31.35■■■□□ 2.61
SPAST-204ENST00000621856 ARAP3Q8WWN8 1544 aa31.34■■■□□ 2.61
SPAST-204ENST00000621856 KIAA1107Q9UPP5 1409 aa31.33■■■□□ 2.61
SPAST-204ENST00000621856 ABCC1P33527 1531 aa31.27■■■□□ 2.6
SPAST-204ENST00000621856 MAST1Q9Y2H9 1570 aa31.26■■■□□ 2.59
SPAST-204ENST00000621856 CYB5RLQ6IPT4 315 aa31.25■■■□□ 2.59
SPAST-204ENST00000621856 ARHGEF12Q9NZN5 1544 aa31.24■■■□□ 2.59
SPAST-204ENST00000621856 SIN3AQ96ST3 1273 aa31.24■■■□□ 2.59
SPAST-204ENST00000621856 ANKRD50Q9ULJ7 1429 aa31.23■■■□□ 2.59
SPAST-204ENST00000621856 NEUROD1Q13562 356 aa31.22■■■□□ 2.59
SPAST-204ENST00000621856 KIF15Q9NS87 1388 aa31.21■■■□□ 2.59
SPAST-204ENST00000621856 FANCAO15360 1455 aa31.2■■■□□ 2.58
SPAST-204ENST00000621856 MPHOSPH9Q99550 1183 aa31.19■■■□□ 2.58
SPAST-204ENST00000621856 DENND4BO75064 1496 aaPredicted RBP31.15■■■□□ 2.58
SPAST-204ENST00000621856 PLXNC1O60486 1568 aa31.13■■■□□ 2.57
SPAST-204ENST00000621856 TRAPPC8Q9Y2L5 1435 aa31.13■■■□□ 2.57
SPAST-204ENST00000621856 SLC4A1APQ9BWU0 796 aaKnown RBP31.1■■■□□ 2.57
SPAST-204ENST00000621856 TIMELESSQ9UNS1 1208 aa31.1■■■□□ 2.57
SPAST-204ENST00000621856 CD109Q6YHK3 1445 aa31.09■■■□□ 2.57
SPAST-204ENST00000621856 ADGRL1O94910 1474 aa31.08■■■□□ 2.57
SPAST-204ENST00000621856 PZPP20742 1482 aa31.08■■■□□ 2.57
SPAST-204ENST00000621856 CFAP74Q9C0B2 1584 aa31.06■■■□□ 2.56
SPAST-204ENST00000621856 SPAG9O60271 1321 aaKnown RBP31.03■■■□□ 2.56
SPAST-204ENST00000621856 ZNF316A6NFI3 1004 aaPredicted RBP31.03■■■□□ 2.56
SPAST-204ENST00000621856 SCAPERQ9BY12 1400 aa31.02■■■□□ 2.56
SPAST-204ENST00000621856 TONSLQ96HA7 1378 aa31.02■■■□□ 2.56
SPAST-204ENST00000621856 DUOX2Q9NRD8 1548 aa31.02■■■□□ 2.56
SPAST-204ENST00000621856 FOXD1Q16676 465 aa31.01■■■□□ 2.55
SPAST-204ENST00000621856 AFAP1Q8N556 730 aa31.01■■■□□ 2.55
SPAST-204ENST00000621856 NUP155O75694 1391 aa31■■■□□ 2.55
SPAST-204ENST00000621856 KDM5DQ9BY66 1539 aa31■■■□□ 2.55
SPAST-204ENST00000621856 RTEL1-TNFRSF6BF6WH68 1400 aa30.99■■■□□ 2.55
SPAST-204ENST00000621856 ZFYVE16Q7Z3T8 1539 aa30.98■■■□□ 2.55
SPAST-204ENST00000621856 ANKRD30BQ9BXX2 1392 aa30.94■■■□□ 2.54
SPAST-204ENST00000621856 ERBINQ96RT1 1412 aa30.94■■■□□ 2.54
SPAST-204ENST00000621856 INO80Q9ULG1 1556 aaPredicted RBP30.93■■■□□ 2.54
SPAST-204ENST00000621856 ATP7AQ04656 1500 aa30.93■■■□□ 2.54
SPAST-204ENST00000621856 UNC13BO14795 1591 aa30.93■■■□□ 2.54
SPAST-204ENST00000621856 GLI2P10070 1586 aa30.92■■■□□ 2.54
SPAST-204ENST00000621856 MAP3K4Q9Y6R4 1608 aa30.92■■■□□ 2.54
SPAST-204ENST00000621856 PKD2Q13563 968 aa30.91■■■□□ 2.54
SPAST-204ENST00000621856 MYT1LQ9UL68 1186 aa30.89■■■□□ 2.54
SPAST-204ENST00000621856 PPP1R15AO75807 674 aaPredicted RBP30.88■■■□□ 2.53
SPAST-204ENST00000621856 ZNF518AQ6AHZ1 1483 aa30.88■■■□□ 2.53
SPAST-204ENST00000621856 NEO1Q92859 1461 aa30.87■■■□□ 2.53
SPAST-204ENST00000621856 FAM135AQ9P2D6 1515 aa30.85■■■□□ 2.53
SPAST-204ENST00000621856 DIP2BQ9P265 1576 aa30.84■■■□□ 2.53
SPAST-204ENST00000621856 RPRD2Q5VT52 1461 aaKnown RBP30.83■■■□□ 2.53
SPAST-204ENST00000621856 POGZQ7Z3K3 1410 aa30.82■■■□□ 2.53
SPAST-204ENST00000621856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.82■■■□□ 2.52
SPAST-204ENST00000621856 IQGAP3Q86VI3 1631 aa30.81■■■□□ 2.52
SPAST-204ENST00000621856 KIDINS220Q9ULH0 1771 aa30.8■■■□□ 2.52
SPAST-204ENST00000621856 FAM69CQ0P6D2 419 aa30.79■■■□□ 2.52
SPAST-204ENST00000621856 MAGI2Q86UL8 1455 aa30.78■■■□□ 2.52
SPAST-204ENST00000621856 KDM5CP41229 1560 aa30.78■■■□□ 2.52
SPAST-204ENST00000621856 DIEXFQ68CQ4 756 aaKnown RBP30.75■■■□□ 2.51
SPAST-204ENST00000621856 HECW2Q9P2P5 1572 aa30.73■■■□□ 2.51
SPAST-204ENST00000621856 EIF2AK4Q9P2K8 1649 aaKnown RBP30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms