RNA–Protein interactions for RNA: ENST00000620859.4

LINC01515-217, Transcript of long intergenic non-protein coding RNA 1515, human

TSL 5 BASIC

Gene LINC01515, Length 694 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01515-217	ENST00000620859	ZNF710	Q8N1W2	664 aa		11.36	□□□□□ -0.59
LINC01515-217	ENST00000620859	HS3ST6	Q96QI5	342 aa		11.35	□□□□□ -0.59
LINC01515-217	ENST00000620859	FAM205C	A6NFA0	338 aa		11.34	□□□□□ -0.59
LINC01515-217	ENST00000620859	HS6ST3	Q8IZP7	471 aa		11.33	□□□□□ -0.6
LINC01515-217	ENST00000620859	RIMBP2	O15034	1052 aa		11.31	□□□□□ -0.6
LINC01515-217	ENST00000620859	ZSWIM6	Q9HCJ5	1215 aa		11.3	□□□□□ -0.6
LINC01515-217	ENST00000620859	KIF3C	O14782	793 aa		11.29	□□□□□ -0.6
LINC01515-217	ENST00000620859	PPP1R37	O75864	691 aa		11.29	□□□□□ -0.6
LINC01515-217	ENST00000620859	GPR153	Q6NV75	609 aa		11.27	□□□□□ -0.61
LINC01515-217	ENST00000620859	C2orf72	A6NCS6	295 aa		11.26	□□□□□ -0.61
LINC01515-217	ENST00000620859	KRTAP3-3	Q9BYR6	98 aa		11.26	□□□□□ -0.61
LINC01515-217	ENST00000620859	KRTAP3-2	Q9BYR7	98 aa		11.26	□□□□□ -0.61
LINC01515-217	ENST00000620859	CHGA	P10645	457 aa	Known RBP	11.24	□□□□□ -0.61
LINC01515-217	ENST00000620859	SPNS2	Q8IVW8	549 aa		11.24	□□□□□ -0.61
LINC01515-217	ENST00000620859	ERBB3	P21860	1342 aa		11.24	□□□□□ -0.61
LINC01515-217	ENST00000620859	DNAJC5	Q9H3Z4	198 aa		11.22	□□□□□ -0.61
LINC01515-217	ENST00000620859	ARSI	Q5FYB1	569 aa		11.2	□□□□□ -0.62
LINC01515-217	ENST00000620859	MMRN1	Q13201	1228 aa		11.19	□□□□□ -0.62
LINC01515-217	ENST00000620859	NKX1-1	Q15270	411 aa	Predicted RBP	11.19	□□□□□ -0.62
LINC01515-217	ENST00000620859	VARS2	Q5ST30	1063 aa	Known RBP	11.18	□□□□□ -0.62
LINC01515-217	ENST00000620859	TMC2	Q8TDI7	906 aa		11.18	□□□□□ -0.62
LINC01515-217	ENST00000620859	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
LINC01515-217	ENST00000620859	SLC34A2	O95436	690 aa		11.14	□□□□□ -0.63
LINC01515-217	ENST00000620859	ZNF687	Q8N1G0	1237 aa		11.12	□□□□□ -0.63
LINC01515-217	ENST00000620859	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC01515-217	ENST00000620859	PCDHGA4	Q9Y5G9	962 aa		11.1	□□□□□ -0.63
LINC01515-217	ENST00000620859	GPHN	Q9NQX3	736 aa	Predicted RBP	11.09	□□□□□ -0.63
LINC01515-217	ENST00000620859	RYDEN	Q9NUL5	291 aa	Known RBP	11.08	□□□□□ -0.64
LINC01515-217	ENST00000620859	NUDT7	P0C024	238 aa		11.07	□□□□□ -0.64
LINC01515-217	ENST00000620859	FOXK1	P85037	733 aa		11.07	□□□□□ -0.64
LINC01515-217	ENST00000620859	PLPP6	Q8IY26	295 aa		11.04	□□□□□ -0.64
LINC01515-217	ENST00000620859	DSG2	Q14126	1118 aa		11.03	□□□□□ -0.64
LINC01515-217	ENST00000620859	PTCD2	Q8WV60	388 aa	Known RBP	11.03	□□□□□ -0.64
LINC01515-217	ENST00000620859	KDM4F	A0A1W2PPD8	638 aa		11.02	□□□□□ -0.65
LINC01515-217	ENST00000620859	GTPBP6	O43824	516 aa	Predicted RBP	11.02	□□□□□ -0.65
LINC01515-217	ENST00000620859	LHX6	Q9UPM6	363 aa		11.02	□□□□□ -0.65
LINC01515-217	ENST00000620859	CRISPLD2	Q9H0B8	497 aa		10.99	□□□□□ -0.65
LINC01515-217	ENST00000620859	DCAF8L2	P0C7V8	631 aa		10.97	□□□□□ -0.65
LINC01515-217	ENST00000620859	NCKAP5L	Q9HCH0	1330 aa		10.95	□□□□□ -0.66
LINC01515-217	ENST00000620859	POTEE	Q6S8J3	1075 aa		10.95	□□□□□ -0.66
LINC01515-217	ENST00000620859	PBX2	P40425	430 aa		10.94	□□□□□ -0.66
LINC01515-217	ENST00000620859	LSM11	P83369	360 aa	Known RBP eCLIP	10.93	□□□□□ -0.66
LINC01515-217	ENST00000620859	ANKRD13D	Q6ZTN6	518 aa		10.93	□□□□□ -0.66
LINC01515-217	ENST00000620859	PSD	A5PKW4	1024 aa	Predicted RBP	10.91	□□□□□ -0.66
LINC01515-217	ENST00000620859	TBC1D12	O60347	775 aa		10.91	□□□□□ -0.66
LINC01515-217	ENST00000620859	PPP1R15B	Q5SWA1	713 aa		10.91	□□□□□ -0.66
LINC01515-217	ENST00000620859	OXER1	Q8TDS5	423 aa		10.91	□□□□□ -0.66
LINC01515-217	ENST00000620859	PDE4A	P27815	886 aa		10.9	□□□□□ -0.66
LINC01515-217	ENST00000620859	MYT1L	Q9UL68	1186 aa		10.9	□□□□□ -0.66
LINC01515-217	ENST00000620859	AXIN2	Q9Y2T1	843 aa		10.9	□□□□□ -0.66
LINC01515-217	ENST00000620859	PTGER2	P43116	358 aa		10.89	□□□□□ -0.67
LINC01515-217	ENST00000620859	RNF166	Q96A37	237 aa	Predicted RBP	10.89	□□□□□ -0.67
LINC01515-217	ENST00000620859	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
LINC01515-217	ENST00000620859	ARHGAP33	O14559	1287 aa		10.85	□□□□□ -0.67
LINC01515-217	ENST00000620859	LARP6	Q9BRS8	491 aa	Known RBP	10.85	□□□□□ -0.67
LINC01515-217	ENST00000620859	MFSD10	Q14728	455 aa		10.84	□□□□□ -0.67
LINC01515-217	ENST00000620859	PPP4R3B	Q5MIZ7	849 aa		10.82	□□□□□ -0.68
LINC01515-217	ENST00000620859	CADPS2	Q86UW7	1296 aa		10.82	□□□□□ -0.68
LINC01515-217	ENST00000620859	DDX27	Q96GQ7	796 aa	Known RBP	10.82	□□□□□ -0.68
LINC01515-217	ENST00000620859	PSEN2	P49810	448 aa		10.79	□□□□□ -0.68
LINC01515-217	ENST00000620859	BBX	Q8WY36	941 aa	Predicted RBP	10.79	□□□□□ -0.68
LINC01515-217	ENST00000620859	DMRTA1	Q5VZB9	504 aa		10.78	□□□□□ -0.68
LINC01515-217	ENST00000620859	ADGRD1	Q6QNK2	874 aa		10.78	□□□□□ -0.68
LINC01515-217	ENST00000620859	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.78	□□□□□ -0.68
LINC01515-217	ENST00000620859	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.77	□□□□□ -0.69
LINC01515-217	ENST00000620859	TK2	O00142	265 aa		10.76	□□□□□ -0.69
LINC01515-217	ENST00000620859	ZNF454	Q8N9F8	522 aa		10.75	□□□□□ -0.69
LINC01515-217	ENST00000620859	EMILIN3	Q9NT22	766 aa		10.75	□□□□□ -0.69
LINC01515-217	ENST00000620859	EVI5	O60447	810 aa		10.74	□□□□□ -0.69
LINC01515-217	ENST00000620859	FOSB	P53539	338 aa		10.74	□□□□□ -0.69
LINC01515-217	ENST00000620859	RTN4	Q9NQC3	1192 aa	Known RBP	10.74	□□□□□ -0.69
LINC01515-217	ENST00000620859	HR	O43593	1189 aa		10.73	□□□□□ -0.69
LINC01515-217	ENST00000620859	KCNK17	Q96T54	332 aa		10.73	□□□□□ -0.69
LINC01515-217	ENST00000620859	MAP3K9	P80192	1104 aa		10.71	□□□□□ -0.69
LINC01515-217	ENST00000620859	BCL2L12	Q9HB09	334 aa		10.71	□□□□□ -0.69
LINC01515-217	ENST00000620859	JPH4	Q96JJ6	628 aa		10.7	□□□□□ -0.7
LINC01515-217	ENST00000620859	CAMK2B	Q13554	666 aa		10.68	□□□□□ -0.7
LINC01515-217	ENST00000620859	KCNH8	Q96L42	1107 aa		10.68	□□□□□ -0.7
LINC01515-217	ENST00000620859	VPS9D1	Q9Y2B5	631 aa		10.67	□□□□□ -0.7
LINC01515-217	ENST00000620859	SPRYD3	Q8NCJ5	442 aa		10.65	□□□□□ -0.7
LINC01515-217	ENST00000620859	ZDHHC16	Q969W1	377 aa		10.65	□□□□□ -0.7
LINC01515-217	ENST00000620859	SLC4A5	Q9BY07	1137 aa		10.65	□□□□□ -0.7
LINC01515-217	ENST00000620859	ADAM33	Q9BZ11	813 aa		10.65	□□□□□ -0.7
LINC01515-217	ENST00000620859	PTPRE	P23469	700 aa		10.64	□□□□□ -0.71
LINC01515-217	ENST00000620859	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.62	□□□□□ -0.71
LINC01515-217	ENST00000620859	HCST	Q9UBK5	93 aa		10.62	□□□□□ -0.71
LINC01515-217	ENST00000620859	PCDHGA10	Q9Y5H3	936 aa		10.62	□□□□□ -0.71
LINC01515-217	ENST00000620859	ZBED2	Q9BTP6	218 aa		10.6	□□□□□ -0.71
LINC01515-217	ENST00000620859	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.59	□□□□□ -0.71
LINC01515-217	ENST00000620859	DPYSL4	O14531	572 aa		10.59	□□□□□ -0.71
LINC01515-217	ENST00000620859	STAC3	Q96MF2	364 aa		10.58	□□□□□ -0.72
LINC01515-217	ENST00000620859	PHF14	O94880	888 aa		10.57	□□□□□ -0.72
LINC01515-217	ENST00000620859	KCTD12	Q96CX2	325 aa	Known RBP	10.57	□□□□□ -0.72
LINC01515-217	ENST00000620859	TYW1B	Q6NUM6	668 aa		10.56	□□□□□ -0.72
LINC01515-217	ENST00000620859	FBXW7	Q969H0	707 aa		10.56	□□□□□ -0.72
LINC01515-217	ENST00000620859	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.55	□□□□□ -0.72
LINC01515-217	ENST00000620859	CFAP44	Q96MT7	982 aa		10.54	□□□□□ -0.72
LINC01515-217	ENST00000620859	PPP1R3G	B7ZBB8	358 aa		10.53	□□□□□ -0.72
LINC01515-217	ENST00000620859	COL9A1	P20849	921 aa		10.52	□□□□□ -0.73
LINC01515-217	ENST00000620859	EPAS1	Q99814	870 aa		10.51	□□□□□ -0.73

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