RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 CDC42BPAQ5VT25 1732 aa22.54■■□□□ 1.2
PSMC3-213ENST00000619920 ZCCHC11Q5TAX3 1644 aaKnown RBP22.52■■□□□ 1.2
PSMC3-213ENST00000619920 GCC2Q8IWJ2 1684 aa22.51■■□□□ 1.19
PSMC3-213ENST00000619920 ACIN1Q9UKV3 1341 aaKnown RBP22.5■■□□□ 1.19
PSMC3-213ENST00000619920 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
PSMC3-213ENST00000619920 MAPKBP1O60336 1514 aa22.48■■□□□ 1.19
PSMC3-213ENST00000619920 RRP7BPQ9NSQ0 103 aa22.47■■□□□ 1.19
PSMC3-213ENST00000619920 ZNF777Q9ULD5 760 aaPredicted RBP22.47■■□□□ 1.19
PSMC3-213ENST00000619920 PREX2Q70Z35 1606 aa22.45■■□□□ 1.18
PSMC3-213ENST00000619920 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.45■■□□□ 1.183e-6■■□□□ 14
PSMC3-213ENST00000619920 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
PSMC3-213ENST00000619920 TTC37Q6PGP7 1564 aa22.41■■□□□ 1.18
PSMC3-213ENST00000619920 CDC42BPBQ9Y5S2 1711 aa22.41■■□□□ 1.18
PSMC3-213ENST00000619920 SHANK2Q9UPX8 1470 aa22.41■■□□□ 1.18
PSMC3-213ENST00000619920 CROCC2H7BZ55 1655 aa22.41■■□□□ 1.18
PSMC3-213ENST00000619920 ARHGEF5Q12774 1597 aa22.39■■□□□ 1.18
PSMC3-213ENST00000619920 RSPH4AQ5TD94 716 aa22.39■■□□□ 1.18
PSMC3-213ENST00000619920 ADGBQ8N7X0 1667 aa22.39■■□□□ 1.17
PSMC3-213ENST00000619920 NCOA1Q15788 1441 aa22.38■■□□□ 1.17
PSMC3-213ENST00000619920 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
PSMC3-213ENST00000619920 MYO5CQ9NQX4 1742 aa22.37■■□□□ 1.17
PSMC3-213ENST00000619920 ANKRD30AQ9BXX3 1397 aa22.36■■□□□ 1.17
PSMC3-213ENST00000619920 SAMD9LQ8IVG5 1584 aa22.36■■□□□ 1.17
PSMC3-213ENST00000619920 MBD5Q9P267 1494 aa22.36■■□□□ 1.17
PSMC3-213ENST00000619920 PLCH2O75038 1416 aa22.35■■□□□ 1.17
PSMC3-213ENST00000619920 WDR7Q9Y4E6 1490 aa22.35■■□□□ 1.17
PSMC3-213ENST00000619920 ARHGAP5Q13017 1502 aa22.35■■□□□ 1.17
PSMC3-213ENST00000619920 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
PSMC3-213ENST00000619920 KDM6BO15054 1643 aa22.34■■□□□ 1.17
PSMC3-213ENST00000619920 TIMELESSQ9UNS1 1208 aa22.33■■□□□ 1.17
PSMC3-213ENST00000619920 KIAA1107Q9UPP5 1409 aa22.33■■□□□ 1.17
PSMC3-213ENST00000619920 TSPY4P0CV99 314 aa22.33■■□□□ 1.16
PSMC3-213ENST00000619920 TSPY10P0CW01 314 aa22.33■■□□□ 1.16
PSMC3-213ENST00000619920 C9orf84Q5VXU9 1444 aa22.32■■□□□ 1.16
PSMC3-213ENST00000619920 CCDC141Q6ZP82 1450 aa22.31■■□□□ 1.16
PSMC3-213ENST00000619920 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
PSMC3-213ENST00000619920 HNRNPMP52272 730 aaKnown RBP eCLIP22.3■■□□□ 1.16
PSMC3-213ENST00000619920 NPM1P06748 294 aaKnown RBP eCLIP22.29■■□□□ 1.16
PSMC3-213ENST00000619920 TRIM52Q96A61 297 aa22.29■■□□□ 1.16
PSMC3-213ENST00000619920 EFCAB2Q5VUJ9 269 aa22.29■■□□□ 1.16
PSMC3-213ENST00000619920 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
PSMC3-213ENST00000619920 SIN3AQ96ST3 1273 aa22.25■■□□□ 1.15
PSMC3-213ENST00000619920 SYCP2Q9BX26 1530 aa22.25■■□□□ 1.15
PSMC3-213ENST00000619920 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
PSMC3-213ENST00000619920 MPHOSPH9Q99550 1183 aa22.25■■□□□ 1.15
PSMC3-213ENST00000619920 MAST1Q9Y2H9 1570 aa22.24■■□□□ 1.15
PSMC3-213ENST00000619920 ABCA9Q8IUA7 1624 aa22.23■■□□□ 1.15
PSMC3-213ENST00000619920 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
PSMC3-213ENST00000619920 NEUROD1Q13562 356 aa22.21■■□□□ 1.15
PSMC3-213ENST00000619920 DENND4BO75064 1496 aaPredicted RBP22.21■■□□□ 1.15
PSMC3-213ENST00000619920 KIF15Q9NS87 1388 aa22.19■■□□□ 1.14
PSMC3-213ENST00000619920 ABCC1P33527 1531 aa22.19■■□□□ 1.14
PSMC3-213ENST00000619920 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
PSMC3-213ENST00000619920 PZPP20742 1482 aa22.13■■□□□ 1.13
PSMC3-213ENST00000619920 SLC4A1APQ9BWU0 796 aaKnown RBP22.13■■□□□ 1.13
PSMC3-213ENST00000619920 PLXNC1O60486 1568 aa22.13■■□□□ 1.13
PSMC3-213ENST00000619920 TONSLQ96HA7 1378 aa22.12■■□□□ 1.13
PSMC3-213ENST00000619920 FANCAO15360 1455 aa22.12■■□□□ 1.13
PSMC3-213ENST00000619920 PPP1R15AO75807 674 aaPredicted RBP22.1■■□□□ 1.13
PSMC3-213ENST00000619920 ANKRD30BQ9BXX2 1392 aa22.09■■□□□ 1.13
PSMC3-213ENST00000619920 KDM5DQ9BY66 1539 aa22.09■■□□□ 1.13
PSMC3-213ENST00000619920 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
PSMC3-213ENST00000619920 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
PSMC3-213ENST00000619920 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
PSMC3-213ENST00000619920 TRAPPC8Q9Y2L5 1435 aa22.08■■□□□ 1.13
PSMC3-213ENST00000619920 RTEL1-TNFRSF6BF6WH68 1400 aa22.08■■□□□ 1.12
PSMC3-213ENST00000619920 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
PSMC3-213ENST00000619920 NUP155O75694 1391 aa22.05■■□□□ 1.12
PSMC3-213ENST00000619920 DIEXFQ68CQ4 756 aaKnown RBP22.04■■□□□ 1.12
PSMC3-213ENST00000619920 CYB5RLQ6IPT4 315 aa22.04■■□□□ 1.12
PSMC3-213ENST00000619920 CD109Q6YHK3 1445 aa22.03■■□□□ 1.12
PSMC3-213ENST00000619920 SPAG9O60271 1321 aaKnown RBP22.03■■□□□ 1.12
PSMC3-213ENST00000619920 FOXD1Q16676 465 aa22.03■■□□□ 1.12
PSMC3-213ENST00000619920 ADGRL1O94910 1474 aa22.02■■□□□ 1.12
PSMC3-213ENST00000619920 ERBINQ96RT1 1412 aa22.02■■□□□ 1.12
PSMC3-213ENST00000619920 CFAP74Q9C0B2 1584 aa22.01■■□□□ 1.11
PSMC3-213ENST00000619920 SCAPERQ9BY12 1400 aa22■■□□□ 1.11
PSMC3-213ENST00000619920 RPRD2Q5VT52 1461 aaKnown RBP22■■□□□ 1.11
PSMC3-213ENST00000619920 PKD2Q13563 968 aa21.99■■□□□ 1.11
PSMC3-213ENST00000619920 AFAP1Q8N556 730 aa21.99■■□□□ 1.11
PSMC3-213ENST00000619920 UNC13BO14795 1591 aa21.99■■□□□ 1.11
PSMC3-213ENST00000619920 ZFYVE16Q7Z3T8 1539 aa21.98■■□□□ 1.11
PSMC3-213ENST00000619920 INO80Q9ULG1 1556 aaPredicted RBP21.95■■□□□ 1.1
PSMC3-213ENST00000619920 FAM135AQ9P2D6 1515 aa21.94■■□□□ 1.1
PSMC3-213ENST00000619920 ATP7AQ04656 1500 aa21.94■■□□□ 1.1
PSMC3-213ENST00000619920 NEO1Q92859 1461 aa21.93■■□□□ 1.1
PSMC3-213ENST00000619920 GLI2P10070 1586 aa21.93■■□□□ 1.1
PSMC3-213ENST00000619920 MAGI2Q86UL8 1455 aa21.92■■□□□ 1.1
PSMC3-213ENST00000619920 ZNF518AQ6AHZ1 1483 aa21.92■■□□□ 1.1
PSMC3-213ENST00000619920 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
PSMC3-213ENST00000619920 IQGAP3Q86VI3 1631 aa21.89■■□□□ 1.1
PSMC3-213ENST00000619920 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
PSMC3-213ENST00000619920 TEX14Q8IWB6 1497 aa21.87■■□□□ 1.09
PSMC3-213ENST00000619920 POGZQ7Z3K3 1410 aa21.87■■□□□ 1.09
PSMC3-213ENST00000619920 KDM5CP41229 1560 aa21.85■■□□□ 1.09
PSMC3-213ENST00000619920 DHX29Q7Z478 1369 aaKnown RBP21.84■■□□□ 1.09
PSMC3-213ENST00000619920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.092e-6■■■■□ 21.5
PSMC3-213ENST00000619920 MLH3Q9UHC1 1453 aa21.83■■□□□ 1.09
PSMC3-213ENST00000619920 EIF2AK4Q9P2K8 1649 aaKnown RBP21.82■■□□□ 1.08
PSMC3-213ENST00000619920 KIDINS220Q9ULH0 1771 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms