RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 SCAPERQ9BY12 1400 aa24.54■■□□□ 1.52
TMCO3-209ENST00000619336 PLCH2O75038 1416 aa24.52■■□□□ 1.52
TMCO3-209ENST00000619336 CERKQ8TCT0 537 aa24.51■■□□□ 1.51
TMCO3-209ENST00000619336 ARHGEF12Q9NZN5 1544 aa24.49■■□□□ 1.51
TMCO3-209ENST00000619336 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
TMCO3-209ENST00000619336 ATP10AO60312 1499 aa24.47■■□□□ 1.51
TMCO3-209ENST00000619336 PREX1Q8TCU6 1659 aa24.46■■□□□ 1.51
TMCO3-209ENST00000619336 C9orf84Q5VXU9 1444 aa24.46■■□□□ 1.51
TMCO3-209ENST00000619336 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
TMCO3-209ENST00000619336 CEBPAP49715 358 aaPredicted RBP24.42■■□□□ 1.5
TMCO3-209ENST00000619336 KIF14Q15058 1648 aa24.42■■□□□ 1.5
TMCO3-209ENST00000619336 EFCAB2Q5VUJ9 269 aa24.41■■□□□ 1.5
TMCO3-209ENST00000619336 EHMT2Q96KQ7 1210 aa24.39■■□□□ 1.49
TMCO3-209ENST00000619336 STRCQ7RTU9 1775 aa24.37■■□□□ 1.49
TMCO3-209ENST00000619336 ZNF518AQ6AHZ1 1483 aa24.36■■□□□ 1.49
TMCO3-209ENST00000619336 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
TMCO3-209ENST00000619336 ARHGAP5Q13017 1502 aa24.35■■□□□ 1.49
TMCO3-209ENST00000619336 KDM5CP41229 1560 aa24.34■■□□□ 1.49
TMCO3-209ENST00000619336 AFAP1Q8N556 730 aa24.33■■□□□ 1.49
TMCO3-209ENST00000619336 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
TMCO3-209ENST00000619336 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
TMCO3-209ENST00000619336 UHRF1BP1Q6BDS2 1440 aa24.32■■□□□ 1.48
TMCO3-209ENST00000619336 DIP2CQ9Y2E4 1556 aa24.32■■□□□ 1.48
TMCO3-209ENST00000619336 UBTFP17480 764 aaKnown RBP24.31■■□□□ 1.48
TMCO3-209ENST00000619336 MYT1LQ9UL68 1186 aa24.31■■□□□ 1.48
TMCO3-209ENST00000619336 TROQ12816 1431 aaPredicted RBP24.3■■□□□ 1.48
TMCO3-209ENST00000619336 LRRIQ1Q96JM4 1722 aa24.3■■□□□ 1.48
TMCO3-209ENST00000619336 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
TMCO3-209ENST00000619336 SETD1BQ9UPS6 1966 aaKnown RBP24.27■■□□□ 1.48
TMCO3-209ENST00000619336 DMRT2Q9Y5R5 561 aa24.27■■□□□ 1.48
TMCO3-209ENST00000619336 C3P01024 1663 aa24.27■■□□□ 1.48
TMCO3-209ENST00000619336 CDC42BPBQ9Y5S2 1711 aa24.27■■□□□ 1.48
TMCO3-209ENST00000619336 CLIP1P30622 1438 aa24.27■■□□□ 1.48
TMCO3-209ENST00000619336 DISP3Q9P2K9 1392 aa24.26■■□□□ 1.47
TMCO3-209ENST00000619336 REREQ9P2R6 1566 aa24.25■■□□□ 1.47
TMCO3-209ENST00000619336 ILDR2Q71H61 639 aa24.22■■□□□ 1.47
TMCO3-209ENST00000619336 MLH3Q9UHC1 1453 aa24.21■■□□□ 1.47
TMCO3-209ENST00000619336 PREX2Q70Z35 1606 aa24.21■■□□□ 1.47
TMCO3-209ENST00000619336 TRAPPC8Q9Y2L5 1435 aa24.19■■□□□ 1.46
TMCO3-209ENST00000619336 ITSN2Q9NZM3 1697 aa24.19■■□□□ 1.46
TMCO3-209ENST00000619336 ABCC1P33527 1531 aa24.19■■□□□ 1.46
TMCO3-209ENST00000619336 PTPRTO14522 1441 aa24.18■■□□□ 1.46
TMCO3-209ENST00000619336 AGLP35573 1532 aa24.17■■□□□ 1.46
TMCO3-209ENST00000619336 ESF1Q9H501 851 aaKnown RBP24.16■■□□□ 1.46
TMCO3-209ENST00000619336 KIDINS220Q9ULH0 1771 aa24.14■■□□□ 1.46
TMCO3-209ENST00000619336 LTBP4Q8N2S1 1624 aa24.12■■□□□ 1.45
TMCO3-209ENST00000619336 SPATA31D1Q6ZQQ2 1576 aa24.12■■□□□ 1.45
TMCO3-209ENST00000619336 CDC42BPAQ5VT25 1732 aa24.11■■□□□ 1.45
TMCO3-209ENST00000619336 SOCS7O14512 581 aa24.1■■□□□ 1.45
TMCO3-209ENST00000619336 NCOA1Q15788 1441 aa24.1■■□□□ 1.45
TMCO3-209ENST00000619336 CCDC18Q5T9S5 1454 aa24.08■■□□□ 1.45
TMCO3-209ENST00000619336 CNTLNQ9NXG0 1405 aa24.08■■□□□ 1.44
TMCO3-209ENST00000619336 CASKIN1Q8WXD9 1431 aa24.06■■□□□ 1.44
TMCO3-209ENST00000619336 SAMD9LQ8IVG5 1584 aa24.05■■□□□ 1.44
TMCO3-209ENST00000619336 MROH2AA6NES4 1674 aa24.05■■□□□ 1.44
TMCO3-209ENST00000619336 CAMSAP1Q5T5Y3 1602 aa24.04■■□□□ 1.44
TMCO3-209ENST00000619336 IQSEC2Q5JU85 1478 aa24.02■■□□□ 1.44
TMCO3-209ENST00000619336 SUPT6HQ7KZ85 1726 aaKnown RBP24.02■■□□□ 1.44
TMCO3-209ENST00000619336 SYCP2Q9BX26 1530 aa24.01■■□□□ 1.43
TMCO3-209ENST00000619336 ZNF777Q9ULD5 760 aaPredicted RBP24.01■■□□□ 1.43
TMCO3-209ENST00000619336 NPATQ14207 1427 aa24.01■■□□□ 1.43
TMCO3-209ENST00000619336 ZMYM3Q14202 1370 aa23.98■■□□□ 1.43
TMCO3-209ENST00000619336 CLTCQ00610 1675 aaKnown RBP23.98■■□□□ 1.43
TMCO3-209ENST00000619336 SPAG9O60271 1321 aaKnown RBP23.96■■□□□ 1.43
TMCO3-209ENST00000619336 NCKAP5LQ9HCH0 1330 aa23.96■■□□□ 1.43
TMCO3-209ENST00000619336 FYCO1Q9BQS8 1478 aa23.95■■□□□ 1.42
TMCO3-209ENST00000619336 MYO3AQ8NEV4 1616 aa23.95■■□□□ 1.42
TMCO3-209ENST00000619336 ATP7AQ04656 1500 aa23.94■■□□□ 1.42
TMCO3-209ENST00000619336 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
TMCO3-209ENST00000619336 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
TMCO3-209ENST00000619336 GPATCH8Q9UKJ3 1502 aaKnown RBP23.94■■□□□ 1.42
TMCO3-209ENST00000619336 ZNF142P52746 1687 aaPredicted RBP23.93■■□□□ 1.42
TMCO3-209ENST00000619336 ZNF335Q9H4Z2 1342 aaPredicted RBP23.93■■□□□ 1.42
TMCO3-209ENST00000619336 PLXNC1O60486 1568 aa23.92■■□□□ 1.42
TMCO3-209ENST00000619336 INO80Q9ULG1 1556 aaPredicted RBP23.91■■□□□ 1.42
TMCO3-209ENST00000619336 CEP170BQ9Y4F5 1589 aaPredicted RBP23.9■■□□□ 1.42
TMCO3-209ENST00000619336 A2MP01023 1474 aa23.88■■□□□ 1.41
TMCO3-209ENST00000619336 UBAP1LF5GYI3 381 aa23.88■■□□□ 1.41
TMCO3-209ENST00000619336 PTPRKQ15262 1439 aa23.87■■□□□ 1.41
TMCO3-209ENST00000619336 PLA2R1Q13018 1463 aa23.87■■□□□ 1.41
TMCO3-209ENST00000619336 KIAA1107Q9UPP5 1409 aa23.85■■□□□ 1.41
TMCO3-209ENST00000619336 GGT6Q6P531 493 aa23.85■■□□□ 1.41
TMCO3-209ENST00000619336 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
TMCO3-209ENST00000619336 PLEKHH2Q8IVE3 1493 aa23.85■■□□□ 1.41
TMCO3-209ENST00000619336 CFDP1Q9UEE9 299 aaPredicted RBP23.84■■□□□ 1.41
TMCO3-209ENST00000619336 PKD2Q13563 968 aa23.83■■□□□ 1.41
TMCO3-209ENST00000619336 CCNB3Q8WWL7 1395 aa23.82■■□□□ 1.4
TMCO3-209ENST00000619336 ADGBQ8N7X0 1667 aa23.81■■□□□ 1.4
TMCO3-209ENST00000619336 PPP6R1Q9UPN7 881 aa23.78■■□□□ 1.4
TMCO3-209ENST00000619336 DNMT1P26358 1616 aaKnown RBP23.76■■□□□ 1.39
TMCO3-209ENST00000619336 ZNF644Q9H582 1327 aaPredicted RBP23.75■■□□□ 1.39
TMCO3-209ENST00000619336 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
TMCO3-209ENST00000619336 A2ML1A8K2U0 1454 aa23.75■■□□□ 1.39
TMCO3-209ENST00000619336 TIAM1Q13009 1591 aa23.74■■□□□ 1.39
TMCO3-209ENST00000619336 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
TMCO3-209ENST00000619336 MBD5Q9P267 1494 aa23.7■■□□□ 1.38
TMCO3-209ENST00000619336 SCAF1Q9H7N4 1312 aaKnown RBP23.69■■□□□ 1.38
TMCO3-209ENST00000619336 NEURL4Q96JN8 1562 aa23.69■■□□□ 1.38
TMCO3-209ENST00000619336 HSPA1LP34931 641 aa23.66■■□□□ 1.38
TMCO3-209ENST00000619336 PIP4K2BP78356 416 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms