RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 CAMSAP2Q08AD1 1489 aa27.72■■■□□ 2.03
PSPC1-206ENST00000619300 SIN3AQ96ST3 1273 aa27.71■■■□□ 2.03
PSPC1-206ENST00000619300 GCC2Q8IWJ2 1684 aa27.71■■■□□ 2.03
PSPC1-206ENST00000619300 ABCC2Q92887 1545 aa27.71■■■□□ 2.03
PSPC1-206ENST00000619300 ZNF777Q9ULD5 760 aaPredicted RBP27.7■■■□□ 2.02
PSPC1-206ENST00000619300 TIMELESSQ9UNS1 1208 aa27.67■■■□□ 2.02
PSPC1-206ENST00000619300 NEUROD1Q13562 356 aa27.67■■■□□ 2.02
PSPC1-206ENST00000619300 ACIN1Q9UKV3 1341 aaKnown RBP27.64■■■□□ 2.02
PSPC1-206ENST00000619300 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
PSPC1-206ENST00000619300 UHRF1BP1LA0JNW5 1464 aa27.62■■■□□ 2.01
PSPC1-206ENST00000619300 TRIM52Q96A61 297 aa27.6■■■□□ 2.01
PSPC1-206ENST00000619300 KDM6BO15054 1643 aa27.6■■■□□ 2.01
PSPC1-206ENST00000619300 NCOA1Q15788 1441 aa27.56■■■□□ 2
PSPC1-206ENST00000619300 ADGRL2O95490 1459 aa27.53■■■□□ 2
PSPC1-206ENST00000619300 KDM5BQ9UGL1 1544 aa27.53■■■□□ 2
PSPC1-206ENST00000619300 OSCARQ8IYS5 282 aa27.51■■■□□ 2
PSPC1-206ENST00000619300 MPHOSPH9Q99550 1183 aa27.51■■■□□ 2
PSPC1-206ENST00000619300 ANKRD30AQ9BXX3 1397 aa27.5■■□□□ 1.99
PSPC1-206ENST00000619300 CROCC2H7BZ55 1655 aa27.49■■□□□ 1.99
PSPC1-206ENST00000619300 DENND4BO75064 1496 aaPredicted RBP27.48■■□□□ 1.99
PSPC1-206ENST00000619300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.48■■□□□ 1.99
PSPC1-206ENST00000619300 ZCCHC11Q5TAX3 1644 aaKnown RBP27.47■■□□□ 1.99
PSPC1-206ENST00000619300 ADGBQ8N7X0 1667 aa27.47■■□□□ 1.99
PSPC1-206ENST00000619300 PPP1R15AO75807 674 aaPredicted RBP27.47■■□□□ 1.99
PSPC1-206ENST00000619300 SHANK2Q9UPX8 1470 aa27.47■■□□□ 1.99
PSPC1-206ENST00000619300 PREX2Q70Z35 1606 aa27.47■■□□□ 1.99
PSPC1-206ENST00000619300 TSPY4P0CV99 314 aa27.46■■□□□ 1.99
PSPC1-206ENST00000619300 TSPY10P0CW01 314 aa27.46■■□□□ 1.99
PSPC1-206ENST00000619300 HNRNPMP52272 730 aaKnown RBP eCLIP27.46■■□□□ 1.99
PSPC1-206ENST00000619300 KCNH8Q96L42 1107 aa27.46■■□□□ 1.99
PSPC1-206ENST00000619300 TONSLQ96HA7 1378 aa27.45■■□□□ 1.98
PSPC1-206ENST00000619300 CDC42BPBQ9Y5S2 1711 aa27.44■■□□□ 1.98
PSPC1-206ENST00000619300 MBD5Q9P267 1494 aa27.44■■□□□ 1.98
PSPC1-206ENST00000619300 RSPH4AQ5TD94 716 aa27.44■■□□□ 1.98
PSPC1-206ENST00000619300 TTC37Q6PGP7 1564 aa27.44■■□□□ 1.98
PSPC1-206ENST00000619300 C9orf84Q5VXU9 1444 aa27.44■■□□□ 1.98
PSPC1-206ENST00000619300 ARHGEF5Q12774 1597 aa27.43■■□□□ 1.98
PSPC1-206ENST00000619300 SAMD9LQ8IVG5 1584 aa27.41■■□□□ 1.98
PSPC1-206ENST00000619300 ARHGAP5Q13017 1502 aa27.38■■□□□ 1.97
PSPC1-206ENST00000619300 ANKRD50Q9ULJ7 1429 aa27.37■■□□□ 1.97
PSPC1-206ENST00000619300 SLC4A1APQ9BWU0 796 aaKnown RBP27.36■■□□□ 1.97
PSPC1-206ENST00000619300 CCDC141Q6ZP82 1450 aa27.36■■□□□ 1.97
PSPC1-206ENST00000619300 PLCH2O75038 1416 aa27.35■■□□□ 1.97
PSPC1-206ENST00000619300 FOXD1Q16676 465 aa27.33■■□□□ 1.97
PSPC1-206ENST00000619300 KIAA1107Q9UPP5 1409 aa27.33■■□□□ 1.97
PSPC1-206ENST00000619300 MYO5CQ9NQX4 1742 aa27.33■■□□□ 1.97
PSPC1-206ENST00000619300 PLEKHH2Q8IVE3 1493 aa27.32■■□□□ 1.96
PSPC1-206ENST00000619300 ANKRD30BQ9BXX2 1392 aa27.31■■□□□ 1.96
PSPC1-206ENST00000619300 PZPP20742 1482 aa27.3■■□□□ 1.96
PSPC1-206ENST00000619300 EFCAB2Q5VUJ9 269 aa27.29■■□□□ 1.96
PSPC1-206ENST00000619300 KIF15Q9NS87 1388 aa27.29■■□□□ 1.96
PSPC1-206ENST00000619300 SYCP2Q9BX26 1530 aa27.28■■□□□ 1.96
PSPC1-206ENST00000619300 WDR7Q9Y4E6 1490 aa27.26■■□□□ 1.95
PSPC1-206ENST00000619300 MIER1Q8N108 512 aa27.24■■□□□ 1.95
PSPC1-206ENST00000619300 MAST1Q9Y2H9 1570 aa27.21■■□□□ 1.95
PSPC1-206ENST00000619300 NUP155O75694 1391 aa27.2■■□□□ 1.94
PSPC1-206ENST00000619300 ARHGEF12Q9NZN5 1544 aa27.2■■□□□ 1.94
PSPC1-206ENST00000619300 RPRD2Q5VT52 1461 aaKnown RBP27.19■■□□□ 1.94
PSPC1-206ENST00000619300 ARAP3Q8WWN8 1544 aa27.18■■□□□ 1.94
PSPC1-206ENST00000619300 PKD2Q13563 968 aa27.18■■□□□ 1.94
PSPC1-206ENST00000619300 NPM1P06748 294 aaKnown RBP eCLIP27.16■■□□□ 1.94
PSPC1-206ENST00000619300 L3MBTL2Q969R5 705 aa27.16■■□□□ 1.94
PSPC1-206ENST00000619300 ASXL2Q76L83 1435 aa27.16■■□□□ 1.94
PSPC1-206ENST00000619300 KDM5DQ9BY66 1539 aa27.14■■□□□ 1.94
PSPC1-206ENST00000619300 ABCC1P33527 1531 aa27.13■■□□□ 1.93
PSPC1-206ENST00000619300 ABCA9Q8IUA7 1624 aa27.09■■□□□ 1.93
PSPC1-206ENST00000619300 TRAPPC8Q9Y2L5 1435 aa27.09■■□□□ 1.93
PSPC1-206ENST00000619300 PLXNC1O60486 1568 aa27.09■■□□□ 1.93
PSPC1-206ENST00000619300 TEX14Q8IWB6 1497 aa27.05■■□□□ 1.92
PSPC1-206ENST00000619300 HIRIP3Q9BW71 556 aaPredicted RBP27.05■■□□□ 1.92
PSPC1-206ENST00000619300 FANCAO15360 1455 aa27.04■■□□□ 1.92
PSPC1-206ENST00000619300 DUOX2Q9NRD8 1548 aa27.04■■□□□ 1.92
PSPC1-206ENST00000619300 AFAP1Q8N556 730 aa27.02■■□□□ 1.92
PSPC1-206ENST00000619300 SPAG9O60271 1321 aaKnown RBP27.02■■□□□ 1.92
PSPC1-206ENST00000619300 RTEL1-TNFRSF6BF6WH68 1400 aa27.01■■□□□ 1.91
PSPC1-206ENST00000619300 FAM135AQ9P2D6 1515 aa26.99■■□□□ 1.91
PSPC1-206ENST00000619300 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
PSPC1-206ENST00000619300 UNC13BO14795 1591 aa26.97■■□□□ 1.91
PSPC1-206ENST00000619300 DDX10Q13206 875 aaKnown RBP26.96■■□□□ 1.91
PSPC1-206ENST00000619300 NBPF8Q3BBV2 869 aa26.96■■□□□ 1.91
PSPC1-206ENST00000619300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.95■■□□□ 1.93e-7■■■■□ 22.7
PSPC1-206ENST00000619300 SCAPERQ9BY12 1400 aa26.93■■□□□ 1.9
PSPC1-206ENST00000619300 ADGRL1O94910 1474 aa26.93■■□□□ 1.9
PSPC1-206ENST00000619300 EIF4G2P78344 907 aaKnown RBP eCLIP26.91■■□□□ 1.9
PSPC1-206ENST00000619300 ZFYVE16Q7Z3T8 1539 aa26.9■■□□□ 1.9
PSPC1-206ENST00000619300 HSPA5P11021 654 aaKnown RBP26.9■■□□□ 1.9
PSPC1-206ENST00000619300 CENPBP07199 599 aaPredicted RBP26.89■■□□□ 1.9
PSPC1-206ENST00000619300 CD109Q6YHK3 1445 aa26.88■■□□□ 1.89
PSPC1-206ENST00000619300 MAGI2Q86UL8 1455 aa26.88■■□□□ 1.89
PSPC1-206ENST00000619300 IQGAP3Q86VI3 1631 aa26.87■■□□□ 1.89
PSPC1-206ENST00000619300 ATP7AQ04656 1500 aa26.84■■□□□ 1.89
PSPC1-206ENST00000619300 CYB5RLQ6IPT4 315 aa26.83■■□□□ 1.89
PSPC1-206ENST00000619300 INO80Q9ULG1 1556 aaPredicted RBP26.83■■□□□ 1.88
PSPC1-206ENST00000619300 YTHDC1Q96MU7 727 aaKnown RBP26.82■■□□□ 1.88
PSPC1-206ENST00000619300 MYT1LQ9UL68 1186 aa26.81■■□□□ 1.88
PSPC1-206ENST00000619300 PLA2R1Q13018 1463 aa26.79■■□□□ 1.88
PSPC1-206ENST00000619300 CCDC144AA2RUR9 1427 aa26.79■■□□□ 1.88
PSPC1-206ENST00000619300 UHRF1BP1Q6BDS2 1440 aa26.78■■□□□ 1.88
PSPC1-206ENST00000619300 ZNF518AQ6AHZ1 1483 aa26.77■■□□□ 1.88
PSPC1-206ENST00000619300 CFAP74Q9C0B2 1584 aa26.76■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms