RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 VGFO15240 615 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-220ENST00000618606 ZNF687Q8N1G0 1237 aa10.73□□□□□ -0.69
TARDBP-220ENST00000618606 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
TARDBP-220ENST00000618606 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
TARDBP-220ENST00000618606 MYT1LQ9UL68 1186 aa10.68□□□□□ -0.7
TARDBP-220ENST00000618606 PTGER2P43116 358 aa10.64□□□□□ -0.71
TARDBP-220ENST00000618606 NLRP6P59044 892 aa10.64□□□□□ -0.71
TARDBP-220ENST00000618606 ARSIQ5FYB1 569 aa10.63□□□□□ -0.71
TARDBP-220ENST00000618606 FBXO22Q8NEZ5 403 aa10.61□□□□□ -0.71
TARDBP-220ENST00000618606 TAOK2Q9UL54 1235 aa10.6□□□□□ -0.71
TARDBP-220ENST00000618606 ZNF316A6NFI3 1004 aaPredicted RBP10.59□□□□□ -0.71
TARDBP-220ENST00000618606 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.72
TARDBP-220ENST00000618606 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.72
TARDBP-220ENST00000618606 KIF3CO14782 793 aa10.55□□□□□ -0.72
TARDBP-220ENST00000618606 ANKRD13DQ6ZTN6 518 aa10.55□□□□□ -0.72
TARDBP-220ENST00000618606 MFRPQ9BY79 579 aa10.54□□□□□ -0.72
TARDBP-220ENST00000618606 STK24Q9Y6E0 443 aa10.53□□□□□ -0.72
TARDBP-220ENST00000618606 LSM11P83369 360 aaKnown RBP eCLIP10.52□□□□□ -0.73
TARDBP-220ENST00000618606 C2orf72A6NCS6 295 aa10.51□□□□□ -0.73
TARDBP-220ENST00000618606 SLC34A2O95436 690 aa10.49□□□□□ -0.73
TARDBP-220ENST00000618606 PBX2P40425 430 aa10.49□□□□□ -0.73
TARDBP-220ENST00000618606 STK25O00506 426 aa10.47□□□□□ -0.73
TARDBP-220ENST00000618606 NUDT7P0C024 238 aa10.47□□□□□ -0.73
TARDBP-220ENST00000618606 PCDHGA4Q9Y5G9 962 aa10.45□□□□□ -0.74
TARDBP-220ENST00000618606 POTEEQ6S8J3 1075 aa10.44□□□□□ -0.74
TARDBP-220ENST00000618606 LHX6Q9UPM6 363 aa10.44□□□□□ -0.74
TARDBP-220ENST00000618606 TMC2Q8TDI7 906 aa10.41□□□□□ -0.74
TARDBP-220ENST00000618606 ECM2O94769 699 aaPredicted RBP10.4□□□□□ -0.74
TARDBP-220ENST00000618606 AXIN2Q9Y2T1 843 aa10.39□□□□□ -0.75
TARDBP-220ENST00000618606 PSDA5PKW4 1024 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-220ENST00000618606 ARHGAP33O14559 1287 aa10.35□□□□□ -0.75
TARDBP-220ENST00000618606 HCSTQ9UBK5 93 aa10.35□□□□□ -0.75
TARDBP-220ENST00000618606 KDM4FA0A1W2PPD8 638 aa10.34□□□□□ -0.75
TARDBP-220ENST00000618606 RGL2O15211 777 aa10.33□□□□□ -0.76
TARDBP-220ENST00000618606 ADGRD1Q6QNK2 874 aa10.33□□□□□ -0.76
TARDBP-220ENST00000618606 PPP1R37O75864 691 aa10.32□□□□□ -0.76
TARDBP-220ENST00000618606 PKD2Q13563 968 aa10.32□□□□□ -0.76
TARDBP-220ENST00000618606 PTCD2Q8WV60 388 aaKnown RBP10.32□□□□□ -0.76
TARDBP-220ENST00000618606 PLA2G2EQ9NZK7 142 aa10.32□□□□□ -0.76
TARDBP-220ENST00000618606 TK2O00142 265 aa10.3□□□□□ -0.76
TARDBP-220ENST00000618606 FOXK1P85037 733 aa10.28□□□□□ -0.76
TARDBP-220ENST00000618606 HRO43593 1189 aa10.26□□□□□ -0.77
TARDBP-220ENST00000618606 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
TARDBP-220ENST00000618606 PLPP6Q8IY26 295 aa10.24□□□□□ -0.77
TARDBP-220ENST00000618606 PSEN2P49810 448 aa10.23□□□□□ -0.77
TARDBP-220ENST00000618606 GPHNQ9NQX3 736 aaPredicted RBP10.23□□□□□ -0.77
TARDBP-220ENST00000618606 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
TARDBP-220ENST00000618606 TBC1D12O60347 775 aa10.21□□□□□ -0.77
TARDBP-220ENST00000618606 DSG2Q14126 1118 aa10.19□□□□□ -0.78
TARDBP-220ENST00000618606 HS6ST3Q8IZP7 471 aa10.16□□□□□ -0.78
TARDBP-220ENST00000618606 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
TARDBP-220ENST00000618606 KCNH8Q96L42 1107 aa10.15□□□□□ -0.78
TARDBP-220ENST00000618606 STAC3Q96MF2 364 aa10.15□□□□□ -0.78
TARDBP-220ENST00000618606 KCNK17Q96T54 332 aa10.13□□□□□ -0.79
TARDBP-220ENST00000618606 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
TARDBP-220ENST00000618606 VPS9D1Q9Y2B5 631 aa10.11□□□□□ -0.79
TARDBP-220ENST00000618606 SLC4A5Q9BY07 1137 aa10.1□□□□□ -0.79
TARDBP-220ENST00000618606 BCL2L12Q9HB09 334 aa10.07□□□□□ -0.8
TARDBP-220ENST00000618606 ZNF454Q8N9F8 522 aa10.06□□□□□ -0.8
TARDBP-220ENST00000618606 DNAJC5Q9H3Z4 198 aa10.06□□□□□ -0.8
TARDBP-220ENST00000618606 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
TARDBP-220ENST00000618606 CRISPLD2Q9H0B8 497 aa10.05□□□□□ -0.8
TARDBP-220ENST00000618606 BHMG1C9JSJ3 638 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-220ENST00000618606 PTPN5P54829 565 aa10.04□□□□□ -0.8
TARDBP-220ENST00000618606 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.8
TARDBP-220ENST00000618606 RGS20O76081 388 aa10.03□□□□□ -0.8
TARDBP-220ENST00000618606 FOSBP53539 338 aa10.03□□□□□ -0.8
TARDBP-220ENST00000618606 CHGAP10645 457 aaKnown RBP10.02□□□□□ -0.81
TARDBP-220ENST00000618606 RYDENQ9NUL5 291 aaKnown RBP10.02□□□□□ -0.81
TARDBP-220ENST00000618606 PTPREP23469 700 aa10.01□□□□□ -0.81
TARDBP-220ENST00000618606 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
TARDBP-220ENST00000618606 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
TARDBP-220ENST00000618606 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
TARDBP-220ENST00000618606 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
TARDBP-220ENST00000618606 ZBED2Q9BTP6 218 aa9.99□□□□□ -0.81
TARDBP-220ENST00000618606 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
TARDBP-220ENST00000618606 GOLGA8CPA6NN73 597 aa9.96□□□□□ -0.82
TARDBP-220ENST00000618606 PDE4AP27815 886 aa9.96□□□□□ -0.82
TARDBP-220ENST00000618606 MRPL50Q8N5N7 158 aaKnown RBP9.96□□□□□ -0.82
TARDBP-220ENST00000618606 WNT2BQ93097 391 aa9.96□□□□□ -0.82
TARDBP-220ENST00000618606 NCKAP5LQ9HCH0 1330 aa9.96□□□□□ -0.82
TARDBP-220ENST00000618606 ZDHHC16Q969W1 377 aa9.95□□□□□ -0.82
TARDBP-220ENST00000618606 A0A0G2JS52 829 aa9.94□□□□□ -0.82
TARDBP-220ENST00000618606 EVI5O60447 810 aa9.94□□□□□ -0.82
TARDBP-220ENST00000618606 ADAM33Q9BZ11 813 aa9.93□□□□□ -0.82
TARDBP-220ENST00000618606 NBPF3Q9H094 633 aa9.93□□□□□ -0.82
TARDBP-220ENST00000618606 IRX2Q9BZI1 471 aaPredicted RBP9.9□□□□□ -0.82
TARDBP-220ENST00000618606 DDX27Q96GQ7 796 aaKnown RBP9.87□□□□□ -0.83
TARDBP-220ENST00000618606 PPP1R3GB7ZBB8 358 aa9.86□□□□□ -0.83
TARDBP-220ENST00000618606 MAP3K9P80192 1104 aa9.86□□□□□ -0.83
TARDBP-220ENST00000618606 LARP6Q9BRS8 491 aaKnown RBP9.86□□□□□ -0.83
TARDBP-220ENST00000618606 RABGEF1Q9UJ41 708 aa9.86□□□□□ -0.83
TARDBP-220ENST00000618606 MFSD10Q14728 455 aa9.85□□□□□ -0.83
TARDBP-220ENST00000618606 PCDHGA10Q9Y5H3 936 aa9.84□□□□□ -0.83
TARDBP-220ENST00000618606 GTPBP6O43824 516 aaPredicted RBP9.83□□□□□ -0.84
TARDBP-220ENST00000618606 ITGBL1O95965 494 aaPredicted RBP9.83□□□□□ -0.84
TARDBP-220ENST00000618606 ANKK1Q8NFD2 765 aa9.83□□□□□ -0.84
TARDBP-220ENST00000618606 PROX2Q3B8N5 592 aa9.81□□□□□ -0.84
TARDBP-220ENST00000618606 LAPTM4BQ86VI4 370 aa9.81□□□□□ -0.84
TARDBP-220ENST00000618606 EMILIN3Q9NT22 766 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms