RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 CDK11AQ9UQ88 783 aaPredicted RBP11.63□□□□□ -0.55
VPS45-213ENST00000618148 CYB5RLQ6IPT4 315 aa11.62□□□□□ -0.55
VPS45-213ENST00000618148 KCNA4P22459 653 aa11.61□□□□□ -0.55
VPS45-213ENST00000618148 MAPKBP1O60336 1514 aa11.61□□□□□ -0.55
VPS45-213ENST00000618148 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
VPS45-213ENST00000618148 ARID3CA6NKF2 412 aa11.6□□□□□ -0.55
VPS45-213ENST00000618148 NCOA2Q15596 1464 aa11.59□□□□□ -0.55
VPS45-213ENST00000618148 WDR7Q9Y4E6 1490 aa11.59□□□□□ -0.55
VPS45-213ENST00000618148 PLEKHD1A6NEE1 506 aa11.59□□□□□ -0.55
VPS45-213ENST00000618148 ASXL2Q76L83 1435 aa11.59□□□□□ -0.55
VPS45-213ENST00000618148 KIF14Q15058 1648 aa11.58□□□□□ -0.56
VPS45-213ENST00000618148 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
VPS45-213ENST00000618148 PHLDB1Q86UU1 1377 aa11.57□□□□□ -0.56
VPS45-213ENST00000618148 PPARGC1BQ86YN6 1023 aaKnown RBP11.55□□□□□ -0.56
VPS45-213ENST00000618148 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
VPS45-213ENST00000618148 MYOM3Q5VTT5 1437 aa11.54□□□□□ -0.56
VPS45-213ENST00000618148 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
VPS45-213ENST00000618148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.54□□□□□ -0.56
VPS45-213ENST00000618148 GPATCH8Q9UKJ3 1502 aaKnown RBP11.53□□□□□ -0.56
VPS45-213ENST00000618148 MIA2Q96PC5 1412 aa11.52□□□□□ -0.56
VPS45-213ENST00000618148 TTC37Q6PGP7 1564 aa11.52□□□□□ -0.56
VPS45-213ENST00000618148 ABCA9Q8IUA7 1624 aa11.52□□□□□ -0.57
VPS45-213ENST00000618148 FGD6Q6ZV73 1430 aa11.52□□□□□ -0.57
VPS45-213ENST00000618148 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
VPS45-213ENST00000618148 ARAP3Q8WWN8 1544 aa11.51□□□□□ -0.57
VPS45-213ENST00000618148 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS45-213ENST00000618148 POLA2Q14181 598 aa11.51□□□□□ -0.57
VPS45-213ENST00000618148 ITSN2Q9NZM3 1697 aa11.51□□□□□ -0.57
VPS45-213ENST00000618148 GLI2P10070 1586 aa11.5□□□□□ -0.57
VPS45-213ENST00000618148 CDC42BPAQ5VT25 1732 aa11.5□□□□□ -0.57
VPS45-213ENST00000618148 CCNB3Q8WWL7 1395 aa11.5□□□□□ -0.57
VPS45-213ENST00000618148 PREX2Q70Z35 1606 aa11.5□□□□□ -0.57
VPS45-213ENST00000618148 TCOF1Q13428 1488 aaKnown RBP11.49□□□□□ -0.57
VPS45-213ENST00000618148 DIP2BQ9P265 1576 aa11.48□□□□□ -0.57
VPS45-213ENST00000618148 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
VPS45-213ENST00000618148 PLCH2O75038 1416 aa11.48□□□□□ -0.57
VPS45-213ENST00000618148 MYO5CQ9NQX4 1742 aa11.47□□□□□ -0.57
VPS45-213ENST00000618148 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.57
VPS45-213ENST00000618148 CDC42BPBQ9Y5S2 1711 aa11.46□□□□□ -0.57
VPS45-213ENST00000618148 MAP3K4Q9Y6R4 1608 aa11.46□□□□□ -0.58
VPS45-213ENST00000618148 KCNH8Q96L42 1107 aa11.45□□□□□ -0.58
VPS45-213ENST00000618148 CAMSAP2Q08AD1 1489 aa11.43□□□□□ -0.58
VPS45-213ENST00000618148 MYCNP04198 464 aaPredicted RBP11.43□□□□□ -0.58
VPS45-213ENST00000618148 CFDP1Q9UEE9 299 aaPredicted RBP11.43□□□□□ -0.58
VPS45-213ENST00000618148 SAMD9LQ8IVG5 1584 aa11.42□□□□□ -0.58
VPS45-213ENST00000618148 AKT1S1Q96B36 256 aa11.42□□□□□ -0.58
VPS45-213ENST00000618148 ARHGAP5Q13017 1502 aa11.42□□□□□ -0.58
VPS45-213ENST00000618148 CD109Q6YHK3 1445 aa11.41□□□□□ -0.58
VPS45-213ENST00000618148 KIAA1107Q9UPP5 1409 aa11.41□□□□□ -0.58
VPS45-213ENST00000618148 KIF13AQ9H1H9 1805 aa11.41□□□□□ -0.58
VPS45-213ENST00000618148 PLEKHH2Q8IVE3 1493 aa11.41□□□□□ -0.58
VPS45-213ENST00000618148 ARHGEF5Q12774 1597 aa11.4□□□□□ -0.58
VPS45-213ENST00000618148 ABCC1P33527 1531 aa11.4□□□□□ -0.58
VPS45-213ENST00000618148 FANCAO15360 1455 aa11.4□□□□□ -0.59
VPS45-213ENST00000618148 MBD5Q9P267 1494 aa11.4□□□□□ -0.59
VPS45-213ENST00000618148 CFAP74Q9C0B2 1584 aa11.39□□□□□ -0.59
VPS45-213ENST00000618148 ZNF644Q9H582 1327 aaPredicted RBP11.39□□□□□ -0.59
VPS45-213ENST00000618148 NEO1Q92859 1461 aa11.39□□□□□ -0.59
VPS45-213ENST00000618148 DNMT1P26358 1616 aaKnown RBP11.39□□□□□ -0.59
VPS45-213ENST00000618148 EFCAB2Q5VUJ9 269 aa11.39□□□□□ -0.59
VPS45-213ENST00000618148 PPRC1Q5VV67 1664 aaKnown RBP11.38□□□□□ -0.59
VPS45-213ENST00000618148 FAM69CQ0P6D2 419 aa11.37□□□□□ -0.59
VPS45-213ENST00000618148 SHANK2Q9UPX8 1470 aa11.37□□□□□ -0.59
VPS45-213ENST00000618148 ABCC5O15440 1437 aa11.37□□□□□ -0.59
VPS45-213ENST00000618148 DAPK1P53355 1430 aa11.36□□□□□ -0.59
VPS45-213ENST00000618148 PTPRKQ15262 1439 aa11.36□□□□□ -0.59
VPS45-213ENST00000618148 SYCP2Q9BX26 1530 aa11.36□□□□□ -0.59
VPS45-213ENST00000618148 ARHGEF12Q9NZN5 1544 aa11.36□□□□□ -0.59
VPS45-213ENST00000618148 FAM50AQ14320 339 aaKnown RBP11.36□□□□□ -0.59
VPS45-213ENST00000618148 CROCC2H7BZ55 1655 aa11.36□□□□□ -0.59
VPS45-213ENST00000618148 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
VPS45-213ENST00000618148 TEX14Q8IWB6 1497 aa11.35□□□□□ -0.59
VPS45-213ENST00000618148 CCDC141Q6ZP82 1450 aa11.34□□□□□ -0.59
VPS45-213ENST00000618148 RSPH4AQ5TD94 716 aa11.34□□□□□ -0.59
VPS45-213ENST00000618148 PCGF6Q9BYE7 350 aa11.34□□□□□ -0.59
VPS45-213ENST00000618148 ADGRL1O94910 1474 aa11.34□□□□□ -0.59
VPS45-213ENST00000618148 MAST1Q9Y2H9 1570 aa11.33□□□□□ -0.6
VPS45-213ENST00000618148 ADGRL2O95490 1459 aa11.33□□□□□ -0.6
VPS45-213ENST00000618148 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
VPS45-213ENST00000618148 ZNF777Q9ULD5 760 aaPredicted RBP11.33□□□□□ -0.6
VPS45-213ENST00000618148 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
VPS45-213ENST00000618148 KDM5CP41229 1560 aa11.31□□□□□ -0.6
VPS45-213ENST00000618148 POGZQ7Z3K3 1410 aa11.31□□□□□ -0.6
VPS45-213ENST00000618148 SCAPERQ9BY12 1400 aa11.31□□□□□ -0.6
VPS45-213ENST00000618148 TRAPPC8Q9Y2L5 1435 aa11.31□□□□□ -0.6
VPS45-213ENST00000618148 HFM1A2PYH4 1435 aa11.31□□□□□ -0.6
VPS45-213ENST00000618148 C9orf84Q5VXU9 1444 aa11.3□□□□□ -0.6
VPS45-213ENST00000618148 ZNF518AQ6AHZ1 1483 aa11.3□□□□□ -0.6
VPS45-213ENST00000618148 HNRNPMP52272 730 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS45-213ENST00000618148 PIP4P2Q8N4L2 257 aa11.3□□□□□ -0.6
VPS45-213ENST00000618148 ADGBQ8N7X0 1667 aa11.29□□□□□ -0.6
VPS45-213ENST00000618148 RTEL1-TNFRSF6BF6WH68 1400 aa11.29□□□□□ -0.6
VPS45-213ENST00000618148 NCOA1Q15788 1441 aa11.29□□□□□ -0.6
VPS45-213ENST00000618148 DENND4BO75064 1496 aaPredicted RBP11.28□□□□□ -0.6
VPS45-213ENST00000618148 ZFYVE16Q7Z3T8 1539 aa11.28□□□□□ -0.6
VPS45-213ENST00000618148 PLXNC1O60486 1568 aa11.28□□□□□ -0.6
VPS45-213ENST00000618148 INO80Q9ULG1 1556 aaPredicted RBP11.28□□□□□ -0.6
VPS45-213ENST00000618148 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
VPS45-213ENST00000618148 NAIPQ13075 1403 aa11.28□□□□□ -0.6
VPS45-213ENST00000618148 FRMPD1Q5SYB0 1578 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms