RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 CLSPNQ9HAW4 1339 aa30.48■■■□□ 2.47
CNTNAP3B-212ENST00000617422 MAPKBP1O60336 1514 aa30.47■■■□□ 2.47
CNTNAP3B-212ENST00000617422 RRP7BPQ9NSQ0 103 aa30.46■■■□□ 2.47
CNTNAP3B-212ENST00000617422 ZNF777Q9ULD5 760 aaPredicted RBP30.45■■■□□ 2.47
CNTNAP3B-212ENST00000617422 TTC37Q6PGP7 1564 aa30.45■■■□□ 2.46
CNTNAP3B-212ENST00000617422 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.43■■■□□ 2.46
CNTNAP3B-212ENST00000617422 GCC2Q8IWJ2 1684 aa30.43■■■□□ 2.46
CNTNAP3B-212ENST00000617422 CDC42BPBQ9Y5S2 1711 aa30.42■■■□□ 2.46
CNTNAP3B-212ENST00000617422 AKNAQ7Z591 1439 aa30.41■■■□□ 2.46
CNTNAP3B-212ENST00000617422 KDM6BO15054 1643 aa30.4■■■□□ 2.46
CNTNAP3B-212ENST00000617422 PREX2Q70Z35 1606 aa30.39■■■□□ 2.46
CNTNAP3B-212ENST00000617422 KCNH8Q96L42 1107 aa30.36■■■□□ 2.45
CNTNAP3B-212ENST00000617422 CROCC2H7BZ55 1655 aa30.34■■■□□ 2.45
CNTNAP3B-212ENST00000617422 ROCK1Q13464 1354 aa30.34■■■□□ 2.45
CNTNAP3B-212ENST00000617422 SAMD9LQ8IVG5 1584 aa30.32■■■□□ 2.44
CNTNAP3B-212ENST00000617422 MYO5CQ9NQX4 1742 aa30.28■■■□□ 2.44
CNTNAP3B-212ENST00000617422 MBD5Q9P267 1494 aa30.26■■■□□ 2.43
CNTNAP3B-212ENST00000617422 ADGBQ8N7X0 1667 aa30.25■■■□□ 2.43
CNTNAP3B-212ENST00000617422 ARHGAP5Q13017 1502 aa30.24■■■□□ 2.43
CNTNAP3B-212ENST00000617422 NCOA1Q15788 1441 aa30.24■■■□□ 2.43
CNTNAP3B-212ENST00000617422 HNRNPMP52272 730 aaKnown RBP eCLIP30.24■■■□□ 2.43
CNTNAP3B-212ENST00000617422 WDR7Q9Y4E6 1490 aa30.23■■■□□ 2.43
CNTNAP3B-212ENST00000617422 ADGRL2O95490 1459 aa30.23■■■□□ 2.43
CNTNAP3B-212ENST00000617422 ARHGEF5Q12774 1597 aa30.21■■■□□ 2.43
CNTNAP3B-212ENST00000617422 SIN3AQ96ST3 1273 aa30.18■■■□□ 2.42
CNTNAP3B-212ENST00000617422 SHANK2Q9UPX8 1470 aa30.18■■■□□ 2.42
CNTNAP3B-212ENST00000617422 PLCH2O75038 1416 aa30.18■■■□□ 2.42
CNTNAP3B-212ENST00000617422 DENND4BO75064 1496 aaPredicted RBP30.18■■■□□ 2.42
CNTNAP3B-212ENST00000617422 SYCP2Q9BX26 1530 aa30.17■■■□□ 2.42
CNTNAP3B-212ENST00000617422 ASXL2Q76L83 1435 aa30.17■■■□□ 2.42
CNTNAP3B-212ENST00000617422 C9orf84Q5VXU9 1444 aa30.16■■■□□ 2.42
CNTNAP3B-212ENST00000617422 CCDC141Q6ZP82 1450 aa30.11■■■□□ 2.41
CNTNAP3B-212ENST00000617422 ANKRD30AQ9BXX3 1397 aa30.11■■■□□ 2.41
CNTNAP3B-212ENST00000617422 ARHGEF12Q9NZN5 1544 aa30.11■■■□□ 2.41
CNTNAP3B-212ENST00000617422 TRIM52Q96A61 297 aa30.11■■■□□ 2.41
CNTNAP3B-212ENST00000617422 ABCA9Q8IUA7 1624 aa30.08■■■□□ 2.41
CNTNAP3B-212ENST00000617422 NEUROD1Q13562 356 aa30.07■■■□□ 2.4
CNTNAP3B-212ENST00000617422 TSPY4P0CV99 314 aa30.07■■■□□ 2.4
CNTNAP3B-212ENST00000617422 TSPY10P0CW01 314 aa30.07■■■□□ 2.4
CNTNAP3B-212ENST00000617422 KIAA1107Q9UPP5 1409 aa30.06■■■□□ 2.4
CNTNAP3B-212ENST00000617422 RIMBP3CA6NJZ7 1639 aa30.04■■■□□ 2.4
CNTNAP3B-212ENST00000617422 RIMBP3BA6NNM3 1639 aa30.04■■■□□ 2.4
CNTNAP3B-212ENST00000617422 RIMBP3Q9UFD9 1639 aa30.04■■■□□ 2.4
CNTNAP3B-212ENST00000617422 EFCAB2Q5VUJ9 269 aa30.03■■■□□ 2.4
CNTNAP3B-212ENST00000617422 ARAP3Q8WWN8 1544 aa30.03■■■□□ 2.4
CNTNAP3B-212ENST00000617422 PLEKHH2Q8IVE3 1493 aa30.03■■■□□ 2.4
CNTNAP3B-212ENST00000617422 NPM1P06748 294 aaKnown RBP eCLIP30.03■■■□□ 2.4
CNTNAP3B-212ENST00000617422 MPHOSPH9Q99550 1183 aa30.03■■■□□ 2.4
CNTNAP3B-212ENST00000617422 ABCC1P33527 1531 aa30.02■■■□□ 2.4
CNTNAP3B-212ENST00000617422 ANKRD50Q9ULJ7 1429 aa30.02■■■□□ 2.4
CNTNAP3B-212ENST00000617422 RSPH4AQ5TD94 716 aa30.01■■■□□ 2.4
CNTNAP3B-212ENST00000617422 MAST1Q9Y2H9 1570 aa29.99■■■□□ 2.39
CNTNAP3B-212ENST00000617422 KIF15Q9NS87 1388 aa29.99■■■□□ 2.39
CNTNAP3B-212ENST00000617422 CYB5RLQ6IPT4 315 aa29.97■■■□□ 2.39
CNTNAP3B-212ENST00000617422 PZPP20742 1482 aa29.96■■■□□ 2.39
CNTNAP3B-212ENST00000617422 TRAPPC8Q9Y2L5 1435 aa29.95■■■□□ 2.39
CNTNAP3B-212ENST00000617422 FOXD1Q16676 465 aa29.95■■■□□ 2.38
CNTNAP3B-212ENST00000617422 FANCAO15360 1455 aa29.93■■■□□ 2.38
CNTNAP3B-212ENST00000617422 ZNF316A6NFI3 1004 aaPredicted RBP29.93■■■□□ 2.38
CNTNAP3B-212ENST00000617422 ACIN1Q9UKV3 1341 aaKnown RBP29.9■■■□□ 2.38
CNTNAP3B-212ENST00000617422 PLXNC1O60486 1568 aa29.88■■■□□ 2.37
CNTNAP3B-212ENST00000617422 SLC4A1APQ9BWU0 796 aaKnown RBP29.87■■■□□ 2.37
CNTNAP3B-212ENST00000617422 TIMELESSQ9UNS1 1208 aa29.86■■■□□ 2.37
CNTNAP3B-212ENST00000617422 AFAP1Q8N556 730 aa29.85■■■□□ 2.37
CNTNAP3B-212ENST00000617422 ANKRD30BQ9BXX2 1392 aa29.83■■■□□ 2.37
CNTNAP3B-212ENST00000617422 ADGRL1O94910 1474 aa29.8■■■□□ 2.36
CNTNAP3B-212ENST00000617422 KDM5DQ9BY66 1539 aa29.79■■■□□ 2.36
CNTNAP3B-212ENST00000617422 NUP155O75694 1391 aa29.79■■■□□ 2.36
CNTNAP3B-212ENST00000617422 TONSLQ96HA7 1378 aa29.79■■■□□ 2.36
CNTNAP3B-212ENST00000617422 CD109Q6YHK3 1445 aa29.79■■■□□ 2.36
CNTNAP3B-212ENST00000617422 PPP1R15AO75807 674 aaPredicted RBP29.79■■■□□ 2.36
CNTNAP3B-212ENST00000617422 SCAPERQ9BY12 1400 aa29.78■■■□□ 2.36
CNTNAP3B-212ENST00000617422 ZFYVE16Q7Z3T8 1539 aa29.77■■■□□ 2.36
CNTNAP3B-212ENST00000617422 DUOX2Q9NRD8 1548 aa29.74■■■□□ 2.35
CNTNAP3B-212ENST00000617422 SPAG9O60271 1321 aaKnown RBP29.74■■■□□ 2.35
CNTNAP3B-212ENST00000617422 PKD2Q13563 968 aa29.73■■■□□ 2.35
CNTNAP3B-212ENST00000617422 RTEL1-TNFRSF6BF6WH68 1400 aa29.72■■■□□ 2.35
CNTNAP3B-212ENST00000617422 INO80Q9ULG1 1556 aaPredicted RBP29.72■■■□□ 2.35
CNTNAP3B-212ENST00000617422 UNC13BO14795 1591 aa29.71■■■□□ 2.35
CNTNAP3B-212ENST00000617422 SCAF1Q9H7N4 1312 aaKnown RBP29.7■■■□□ 2.35
CNTNAP3B-212ENST00000617422 DIEXFQ68CQ4 756 aaKnown RBP29.7■■■□□ 2.34
CNTNAP3B-212ENST00000617422 RPRD2Q5VT52 1461 aaKnown RBP29.69■■■□□ 2.34
CNTNAP3B-212ENST00000617422 ATP7AQ04656 1500 aa29.68■■■□□ 2.34
CNTNAP3B-212ENST00000617422 FAM135AQ9P2D6 1515 aa29.68■■■□□ 2.34
CNTNAP3B-212ENST00000617422 PELP1Q8IZL8 1130 aaKnown RBP29.67■■■□□ 2.34
CNTNAP3B-212ENST00000617422 ERBINQ96RT1 1412 aa29.67■■■□□ 2.34
CNTNAP3B-212ENST00000617422 CFAP74Q9C0B2 1584 aa29.65■■■□□ 2.34
CNTNAP3B-212ENST00000617422 MAP3K4Q9Y6R4 1608 aa29.64■■■□□ 2.34
CNTNAP3B-212ENST00000617422 MAGI2Q86UL8 1455 aa29.62■■■□□ 2.33
CNTNAP3B-212ENST00000617422 L3MBTL2Q969R5 705 aa29.6■■■□□ 2.33
CNTNAP3B-212ENST00000617422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.6■■■□□ 2.33
CNTNAP3B-212ENST00000617422 KIDINS220Q9ULH0 1771 aa29.6■■■□□ 2.33
CNTNAP3B-212ENST00000617422 TEX14Q8IWB6 1497 aa29.6■■■□□ 2.33
CNTNAP3B-212ENST00000617422 GLI2P10070 1586 aa29.6■■■□□ 2.33
CNTNAP3B-212ENST00000617422 IQGAP3Q86VI3 1631 aa29.59■■■□□ 2.33
CNTNAP3B-212ENST00000617422 ZNF518AQ6AHZ1 1483 aa29.59■■■□□ 2.33
CNTNAP3B-212ENST00000617422 POGZQ7Z3K3 1410 aa29.58■■■□□ 2.33
CNTNAP3B-212ENST00000617422 DIP2BQ9P265 1576 aa29.56■■■□□ 2.32
CNTNAP3B-212ENST00000617422 KDM5CP41229 1560 aa29.56■■■□□ 2.32
CNTNAP3B-212ENST00000617422 NEO1Q92859 1461 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms